DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanA and ntn5

DIOPT Version :10

Sequence 1:NP_476617.1 Gene:LanA / 38723 FlyBaseID:FBgn0002526 Length:3712 Species:Drosophila melanogaster
Sequence 2:NP_001072385.1 Gene:ntn5 / 779839 XenbaseID:XB-GENE-22063027 Length:601 Species:Xenopus tropicalis


Alignment Length:495 Identity:150/495 - (30%)
Similarity:225/495 - (45%) Gaps:87/495 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 YCQAELTPPYFNLATGRKIYATATCGQDTDGPELYCKLVGANTEHDHIDYSVIQGQVCDYCDPTV 83
            ||    .|.:.|:|.|:::..:.|||:.   |:..|..         :|.:.:..:.|..||...
 Frog    51 YC----IPDFINVALGQEVITSNTCGRT---PQKLCYF---------LDSTNVTSRRCQLCDQKR 99

  Fly    84 PERNHPPENAID-GTEAWWQSPPLSRGMKF-NEVNLTINFEQEFHVAYLFIRMGNSPRPGLWTLE 146
            ||.::||....| ..:..|:|   ..|:.| ..|.||:...:.|.:.|..:|. .||||....:.
 Frog   100 PENSYPPSYMTDTDAQTCWKS---ESGITFPQNVTLTLPLGRRFELVYASLRF-CSPRPDSMAIY 160

  Fly   147 KSTDYGKTWTPWQHFSDTPADCETYFGKDTYKPITR--DDDVICTTEYSKIVPLENGEIPVMLLN 209
            ||.||||||.|:|.:|   ..|...:.:.|...|::  ..:..||...:.:.||..|.:..|.|.
 Frog   161 KSMDYGKTWIPFQFYS---THCRRVYDQATTSAISKPMQHEATCTDFQTGVKPLTKGLVAFMPLA 222

  Fly   210 ERPSSTNYFNSTVLQEWTRATNVRIRLLRTKNLLGHLMSVARQDPTVTRRYFYSIKDISIGGRCM 274
            .|||:..:..|.|||:|..||::|:...|..:  |..|.:.|      :..||.:.:|.:||||.
 Frog   223 GRPSARRFEYSPVLQDWVTATDIRVVFNRLHH--GKKMGIRR------KTAFYGVSEIQVGG
RCK 279

  Fly   275 CNGHADTCDV-KDPKSPVRILACRCQHHTCGIQCNECCPGFEQKKWRQNTNARPFNCEPCNCHGH 338
            |||||..|.. |:.      |.|.|||:|.|.:|:.|.|.:..:.|::.|.:....|..|.|:.|
 Frog   280 CNGHASRCTAGKEG------LMCECQHNTIGPECDACKPFYYDRPWQR
ATPSNAHECVACECNLH 338

  Fly   339 SNECKYDEEVNRKGLSLDIHGHYDGGGVCQNCQHNTVGINCNKCKPKYYRPKGKHWNETDVCSPC 403
            |:.|:::.|:.:      :.|. ..||||.||:|||.|.:|:.||..|.|...|.......|.||
 Frog   339 SHRCRFNMELYK------LSGR-KSGGVCLNCRHNTAGRHCHYCKQGYKRDLSKPITSRKAC
KPC 396

  Fly   404 QCDYFFS-TGHCEEETGNCECRAAFQPPSCDSCAYGYY--------------------GYPNCRE 447
            ||....: ...|.:.||.|:|:.....|:|:.||.||.                    .||  :|
 Frog   397 QCHPIGAVNAMCNQTTGQCQCKTGVTGPTCNRCAPGYQQSRSAHMPCVRIQEEMTTTASYP--QE 459

  Fly   448 CECNLNGTNGYHCEAESGQQCPCKINFAGA------YCKQ 481
            .:.   ||||..|      |..||.:.:..      |||:
 Frog   460 WKA---GTNGTEC------QSYCKPSHSRVHMNLRKYCKK 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanANP_476617.1 LamNT 18..271 CDD:214532 73/255 (29%)
EGF_Lam 272..>314 CDD:238012 19/42 (45%)
EGF_Lam 332..389 CDD:238012 21/56 (38%)
EGF_Lam 402..443 CDD:238012 15/61 (25%)
Laminin_EGF 448..497 CDD:395007 11/40 (28%)
Laminin_EGF 495..543 CDD:395007
Laminin_EGF 541..589 CDD:395007
Laminin_EGF 587..634 CDD:395007
Laminin_EGF 632..679 CDD:395007
Laminin_EGF 677..729 CDD:395007
Laminin_EGF 732..782 CDD:395007
EGF_Lam 785..828 CDD:238012
CBM6-CBM35-CBM36_like 831..966 CDD:271143
Laminin_EGF 1375..1423 CDD:395007
EGF_Lam 1420..1457 CDD:238012
Laminin_EGF 1466..1516 CDD:395007
Laminin_EGF 1514..1562 CDD:395007
LamB 1632..1760 CDD:214597
Laminin_EGF <1775..1801 CDD:395007
EGF_Lam 1808..1851 CDD:238012
EGF_Lam 1859..1907 CDD:214543
EGF_Lam 1916..1968 CDD:238012
EGF_Lam 1969..2015 CDD:238012
EGF_Lam 2016..>2054 CDD:238012
EGF_Lam 2063..>2097 CDD:238012
Laminin_I 2134..2385 CDD:310534
SMC_prok_B 2356..>2705 CDD:274008
Laminin_II 2566..2700 CDD:368703
LamG 2674..2843 CDD:238058
LamG 2878..3029 CDD:238058
LamG 3078..3205 CDD:214598
LamG 3349..3512 CDD:238058
LamG 3535..3689 CDD:238058
ntn5NP_001072385.1 Laminin_N 48..276 CDD:470680 73/255 (29%)
EGF_Lam 277..321 CDD:238012 20/49 (41%)
Laminin_EGF 333..393 CDD:395007 23/66 (35%)
EGF_Lam 395..444 CDD:238012 15/48 (31%)
NTR_netrin-1_like 484..598 CDD:239634 3/7 (43%)
Blue background indicates that the domain is not in the aligned region.

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