Sequence 1: | NP_476617.1 | Gene: | LanA / 38723 | FlyBaseID: | FBgn0002526 | Length: | 3712 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009291422.1 | Gene: | ush2a / 568982 | ZFINID: | ZDB-GENE-060503-794 | Length: | 5243 | Species: | Danio rerio |
Alignment Length: | 1424 | Identity: | 364/1424 - (25%) |
---|---|---|---|
Similarity: | 552/1424 - (38%) | Gaps: | 406/1424 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 33 TGR--KIYATATCGQDTDGP------ELYCKLVGAN-TEHDHIDYSVIQGQVCDYCDPTVPERNH 88
Fly 89 PPENAIDGTEAWWQS--PP---LSRGMKFNEVNLTINFEQ-EFHVAYLFIRMGNSPRPGLWTLEK 147
Fly 148 STDYGKTWTPWQHFSDTPADCETYFGKDTYKPITRDDDVICTTEYSKIVPLENGEIPVMLL---- 208
Fly 209 NERPSSTNYFNSTVLQEWTRATNVRIRLLRTKNLLGHLMSVARQDPTVTRRY-FYSIKDISIGGR 272
Fly 273 CMCNGHADTCDVKDPKSPVRILACRCQHHTCGIQCNECCPGFEQKKWRQNTNARPFNCEPCNCHG 337
Fly 338 HSNECKYDEEVNRKGLSLDIH--GHY-DGGGVCQNCQHNTVGINCNKCKPKYYRPKGKHWNETDV 399
Fly 400 CSPCQCDYFFSTGHCEEETGNCECRAAFQPPSCDSCAYGYYGYPNCRECECNLNGT--NGYHCEA 462
Fly 463 ESGQQCPCKINFAGAYCKQCAEGYYGFPE-----CKACECNKIGSITND--CNVTTGECKCLTNF 520
Fly 521 GGDNCERCKHGY-----FNYPTCSYCDCDNQGTESEICNKQSGQCICREGFGGPRCDQCLPGFYN 580
Fly 581 YPD---CKPCNCSSTGS-SAITCDN-TGKCNCLNNFAGKQCTLCTAGYYSYP-----DCLPCHCD 635
Fly 636 SHGS---QGVSCNSDGQCLCQPNFDGRQCDSCKEGFYNFPS------CEDCNCD-----PAGVID 686
Fly 687 KFAGCGSVPVGELCKCKERVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSG 751
Fly 752 QCPC-KPHTQGRRCQECRDGTFDLDSASLFGCKDCSCDVGGSWQSVCDKISGQCKCHPRITG--- 812
Fly 813 ---------------LACTQ-------PLTTHFFPTLHQFQYEYEDG--------SLPSGTQV-- 845
Fly 846 ----RYDYDEAAFPGFSSKGYVVFN--AIQNDVRNEVNVFKSSLYRIVLRYVN--PNAENVTATI 902
Fly 903 ---------SVTSDNPLE----VDQHVKVLLQPTSEPQFVTVAGPLGVKPSAIVLDP-GRYVFTT 953
Fly 954 KANKNVMLDYFVLLPAAYYEAGILTRHISNPCELGNMELCRHYKYASVEVFSPAATPFVIGENSK 1018
Fly 1019 PTNPVETYTDPEHLQIVSHVGDIPVLSGSQNELHYIVDVPRSG---RYIFVIDYISD-------- 1072
Fly 1073 ----RNFPDSYYINLKLKDNPDSETSVLLYPCLYSTICRTSVNEDGM---EKSFYINKEDLQPVI 1130
Fly 1131 ISADIEDGSRFPIISV--TAIPVDQWSI--------DYINPSPVCVIHDQQCATPKFRSVPDSKK 1185
Fly 1186 IEFETDHEDRIATNKPPYASLDERVKLVHLDSQNEATIVIESKVDATKPNLFVILVKYYQPSHPK 1250
Fly 1251 Y--QVYYTLTAGKNQYDGKFDIQHCPSSSGCRGVIRPAGEGSFEIDDEFKFTITTDRSQ 1307 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanA | NP_476617.1 | LamNT | 18..271 | CDD:214532 | 68/257 (26%) |
EGF_Lam | 272..>314 | CDD:238012 | 20/41 (49%) | ||
EGF_Lam | 332..389 | CDD:238012 | 26/59 (44%) | ||
EGF_Lam | 402..443 | CDD:238012 | 0/40 (0%) | ||
EGF_Lam | 448..491 | CDD:238012 | 19/44 (43%) | ||
Laminin_EGF | 495..543 | CDD:278482 | 18/54 (33%) | ||
Laminin_EGF | 541..589 | CDD:278482 | 21/50 (42%) | ||
Laminin_EGF | 587..634 | CDD:278482 | 22/53 (42%) | ||
EGF_Lam | 631..673 | CDD:238012 | 17/44 (39%) | ||
Laminin_EGF | 677..729 | CDD:278482 | 18/56 (32%) | ||
Laminin_EGF | 732..782 | CDD:278482 | 17/50 (34%) | ||
EGF_Lam | 785..828 | CDD:238012 | 17/67 (25%) | ||
CBM6-CBM35-CBM36_like | 831..966 | CDD:271143 | 31/166 (19%) | ||
Laminin_EGF | 1375..1423 | CDD:278482 | |||
EGF_Lam | 1420..1457 | CDD:238012 | |||
Laminin_EGF | 1466..1516 | CDD:278482 | |||
Laminin_EGF | 1514..1562 | CDD:278482 | |||
LamB | 1632..1760 | CDD:214597 | |||
Laminin_EGF | <1775..1801 | CDD:278482 | |||
EGF_Lam | 1808..1851 | CDD:238012 | |||
EGF_Lam | 1859..1907 | CDD:214543 | |||
EGF_Lam | 1916..1968 | CDD:238012 | |||
EGF_Lam | 1969..2015 | CDD:238012 | |||
EGF_Lam | 2016..>2054 | CDD:238012 | |||
EGF_Lam | 2063..>2097 | CDD:238012 | |||
Laminin_I | 2129..2385 | CDD:283627 | |||
Tar | 2278..2662 | CDD:223910 | |||
Laminin_II | 2566..2700 | CDD:283628 | |||
LamG | 2674..2843 | CDD:238058 | |||
LamG | 2878..3029 | CDD:238058 | |||
LamG | 3078..3205 | CDD:214598 | |||
LamG | 3349..3512 | CDD:238058 | |||
LamG | 3535..3689 | CDD:238058 | |||
ush2a | XP_009291422.1 | Laminin_G_3 | 160..297 | CDD:290121 | |
Laminin_N | 307..528 | CDD:295486 | 66/252 (26%) | ||
EGF_Lam | 529..577 | CDD:238012 | 23/50 (46%) | ||
EGF_Lam | 586..638 | CDD:238012 | 25/58 (43%) | ||
Laminin_EGF | 653..703 | CDD:278482 | 19/50 (38%) | ||
Laminin_EGF | 706..756 | CDD:278482 | 16/49 (33%) | ||
EGF_Lam | 759..797 | CDD:214543 | 16/37 (43%) | ||
Laminin_EGF | 808..857 | CDD:278482 | 18/48 (38%) | ||
EGF_Lam | 859..912 | CDD:238012 | 18/52 (35%) | ||
EGF_Lam | 913..963 | CDD:238012 | 18/58 (31%) | ||
EGF_Lam | 965..1014 | CDD:238012 | 17/51 (33%) | ||
EGF_Lam | 1015..1064 | CDD:238012 | 13/48 (27%) | ||
FN3 | 1177..1253 | CDD:238020 | 18/105 (17%) | ||
FN3 | 1264..1375 | CDD:238020 | 26/149 (17%) | ||
FN3 | 1386..1469 | CDD:214495 | 22/148 (15%) | ||
LamG | 1537..1699 | CDD:238058 | |||
LamG | 1737..1890 | CDD:238058 | |||
FN3 | 1981..2071 | CDD:238020 | |||
FN3 | 2163..2253 | CDD:238020 | |||
FN3 | 2258..2341 | CDD:238020 | |||
FN3 | 2352..2443 | CDD:238020 | |||
FN3 | 2447..2544 | CDD:238020 | |||
FN3 | 2547..2633 | CDD:238020 | |||
FN3 | 2635..2733 | CDD:238020 | |||
FN3 | 2743..2807 | CDD:238020 | |||
FN3 | 2830..2932 | CDD:238020 | |||
fn3 | 2939..3014 | CDD:278470 | |||
FN3 | 3032..>3099 | CDD:238020 | |||
FN3 | 3542..3611 | CDD:238020 | |||
FN3 | 3615..3701 | CDD:238020 | |||
fn3 | 3718..3784 | CDD:278470 | |||
FN3 | 3801..3887 | CDD:238020 | |||
FN3 | 3908..3971 | CDD:238020 | |||
FN3 | 3996..4086 | CDD:238020 | |||
FN3 | 4186..4284 | CDD:238020 | |||
fn3 | 4288..4366 | CDD:278470 | |||
FN3 | 4382..4465 | CDD:238020 | |||
FN3 | 4470..4553 | CDD:238020 | |||
FN3 | 4555..4653 | CDD:238020 | |||
FN3 | 4679..4753 | CDD:238020 | |||
fn3 | 4760..4830 | CDD:278470 | |||
FN3 | 4864..4955 | CDD:238020 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 61 | 1.000 | Domainoid score | I10443 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |