Sequence 1: | NP_476617.1 | Gene: | LanA / 38723 | FlyBaseID: | FBgn0002526 | Length: | 3712 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_687343.5 | Gene: | lamc3 / 558958 | ZFINID: | ZDB-GENE-060531-121 | Length: | 1643 | Species: | Danio rerio |
Alignment Length: | 2831 | Identity: | 523/2831 - (18%) |
---|---|---|---|
Similarity: | 817/2831 - (28%) | Gaps: | 1376/2831 - (48%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 LLVILAISY--------CQAE------LTPPYFNLATGRKIYATATCGQDTDGPELYCKLVGANT 61
Fly 62 EHDHIDYSVIQGQVCDYCDPTVPERNHPPENA-------IDGTEAWWQSPPLSRGMKF-NEVNLT 118
Fly 119 INFEQEFHVAYLFIRMGNSPRPGLWTLEKSTDYGKTWTPWQHFSDTPADCETYFGKDT---YKPI 180
Fly 181 TRDDDVICTTEYSKIVPLENGEIPVMLLNERPSSTNYFNSTVLQEWTRATNVRIRLLRTKNLLGH 245
Fly 246 LMSVARQDPTVTRRYFYSIKDISIGGRCMCNGHADTCDVKDPKSPVRILACRCQHHTCGIQCNEC 310
Fly 311 CPGFEQKKWRQNTNARPFNCEPCNCHGHSNECKYDEEVNRKGLSLDIHGHYDGGGVCQNCQHNTV 375
Fly 376 GINCNKCKPKYYRPKGKHWNETDVCSPCQCDYFFSTGHCEEETGNCECRAAFQPPSCDSCAYGYY 440
Fly 441 GYPNCRECECNLNGTNGYHCEAESGQQCPCKINFAGAYCKQCAEGYYGFPECKACECNKIGSITN 505
Fly 506 DCNVTTGECKCLTNFGGDNCERCKHGYFNYPTCSYCDCDNQGTESEICNKQSGQCICREGFGGPR 570
Fly 571 CDQCLPGFYNYPDCKPCNCSSTGSSAITCDNTGKCNCLNNFAGKQCTLCTAGYYSYPDCLPCHCD 635
Fly 636 SHGSQGVSCNSDGQCLCQPNFDGRQCDSCKEGFYNFPSCEDCNCDPAGVIDKFAGCGSVPVGELC 700
Fly 701 KCKERVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQ 765
Fly 766 ECRDGTFDLDSASLFGCKDCSCDVGGSWQSVCDKISGQCKCHPRITGLACTQPLTTHFFPTLHQF 830
Fly 831 QYEYEDGSLPSGTQVRYDYDEAAFPGFSSKGYVVFNAIQNDVRNEVNVFKSSLYRIVLRYVNPNA 895
Fly 896 ENVTATISVTSDNPLEVDQHVKVLLQPTSEPQFVTVAGPLGVKPSAIVLDPGRYVFTTKANKNVM 960
Fly 961 LDYFVLLPAAYYEAGILTRHISNPCELGNMELCRHYKYASVEVFSPAATPFVIGENSKPTNPVET 1025
Fly 1026 YTDPEHLQIVSHVGDIPVLSGSQNELHYIVDVPRSGRYIFVIDYISDRNF---PDSYYINLKLKD 1087
Fly 1088 NPDSETSVLLYPCLYSTICRTSVNEDGMEKSFYINKEDLQPVIISADIEDGSRFPIISVTAIPVD 1152
Fly 1153 QWSIDYINPSPVCVIHDQQCATPKFRSVPDSKKIEFETDHEDRIATNKPPYASLDERVKLVHLDS 1217
Fly 1218 QNEATIVIESKVDATKPNLFVILV--KYYQPSHPKYQVYYTLTAGKNQYDGKFDIQHCPSSSGCR 1280
Fly 1281 GVIRPAGEGSFEIDDEFKFTITTDRSQSVWLDYLVVVPLKQYNDDLLVEETFDQTKEFIQNCGHD 1345
Fly 1346 HFHITHNASDFCKKSVFSLTADYNSGALPCNCDYAGSTSFECHPFGGQCQCKPNVIERTCGACRS 1410
Fly 1411 RYYGFPDCKPCKCPNSAMCEPTTGECMCPPNVIGDLCEKCAPNTYGFHQVIGCEECACNPMGIAN 1475
Fly 1476 GNSQCDLFNGTCECRQNIEGRACDVCSNGYFNFPHCEQCSCHKPGTELEVCDKIDGACFCKKNVV 1540
Fly 1541 GRDCDQCVDGTYNLQESNPDGCTTCFCFGKTSRCDSAYLRVYNVSLLKHVSITTPEFHEESIKFD 1605
Fly 1606 MWPVPADEILLNETTLKADFTLREVNDERPAYFGVLDYLLNQNNHISAYGGDLAYTLHFTSGFDG 1670
Fly 1671 KYIVAPDVILFSEHNALVHTSYEQPSRNEPFTNRVNIVESNFQTISGKPVSRADFMMVLRDLKVI 1735
Fly 1736 FIRANYWEQTLVTHLSDVYLTLADEDADGTGEYQFLAVERCSCPPGYSGHSCEDCAPGYYRD--P 1798
Fly 1799 SGPYGGYCIPCECNGHSETCDCATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICACPL 1863
Fly 1864 PFDSNNFATSCEISESGDQIHCECKPGYTGPRCESCANGFYGEPESIG---QVCKPCECSGNINP 1925
Fly 1926 EDQGSCDTRTGECLRCLNNTFGAACNLCAPGFYGDAI-----KLKNCQSCDCDDLGT----QTCD 1981
Fly 1982 PFVGVCTCHENVIGDRCDRCKPDHYGFESGVGCRACDCG-AASNSTQCDPHTGHCACKSGVTGRQ 2045
Fly 2046 CDRCAVDHWKYEKDGCTPCNCNQGYSRGFGCNPNTGKCQCLPGVIGDRCDACPNRWVLIK-DEGC 2109
Fly 2110 QECNNCHHALLDVTDRMRYQIDSVLE------DFNSVTLAFFTSQKLNYY----------DQLAD 2158
Fly 2159 ELEPKVKLLDPNSV-DLSPSKKAN-------SELESDAK------------------SYAK---- 2193
Fly 2194 -----------QVNQTLANAFDIRERSSTTLGNITVAYDEAVKSADQAKE------AIASVEALS 2241
Fly 2242 KNLEAAASTKIDAALEQ-AQHILGQINGTSIEL--------TPNE-----QVLEKARKLYE---- 2288
Fly 2289 EVN-TLVLPIKAQ-------------NKSLNALKNDIGEFSDHLEDLFNWSEASQAKSADVERRN 2339
Fly 2340 VANQKAFDNSKFDTVSEQKLQAEKNIK---DAGNFLINGDLTLNQINQKLDNLRDAL---NELNS 2398
Fly 2399 FNKNVDEELPVREDQHKEADALTDQAEQKAAELAI-----KAQDLAAQYTDMTASAEPAIKAATA 2458
Fly 2459 YS--GIVEA---VEAAQKLSQDAISAAGNATDKTDGIEERAHLADTGSTDLLQRARQSLQKVQDD 2518
Fly 2519 LEPRLNASAGKVQKISAVNNATEHQLKDINK--LIDQLPAESQRDMWKNSNANASDALEILKNVL 2581
Fly 2582 EILEPVSVQTPKELEKAHGINRDLDLTNKD-----------VSQANKQLDDVEGSVSKLSELAED 2635
Fly 2636 IEEQQHRVGSQSRQLGQEIENLKAQVEAARQLANSI 2671 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanA | NP_476617.1 | LamNT | 18..271 | CDD:214532 | 81/277 (29%) |
EGF_Lam | 272..>314 | CDD:238012 | 18/41 (44%) | ||
EGF_Lam | 332..389 | CDD:238012 | 19/56 (34%) | ||
EGF_Lam | 402..443 | CDD:238012 | 3/40 (8%) | ||
EGF_Lam | 448..491 | CDD:238012 | 0/42 (0%) | ||
Laminin_EGF | 495..543 | CDD:278482 | 5/47 (11%) | ||
Laminin_EGF | 541..589 | CDD:278482 | 0/47 (0%) | ||
Laminin_EGF | 587..634 | CDD:278482 | 0/46 (0%) | ||
EGF_Lam | 631..673 | CDD:238012 | 13/41 (32%) | ||
Laminin_EGF | 677..729 | CDD:278482 | 2/51 (4%) | ||
Laminin_EGF | 732..782 | CDD:278482 | 15/49 (31%) | ||
EGF_Lam | 785..828 | CDD:238012 | 7/42 (17%) | ||
CBM6-CBM35-CBM36_like | 831..966 | CDD:271143 | 10/134 (7%) | ||
Laminin_EGF | 1375..1423 | CDD:278482 | 3/47 (6%) | ||
EGF_Lam | 1420..1457 | CDD:238012 | 0/36 (0%) | ||
Laminin_EGF | 1466..1516 | CDD:278482 | 5/49 (10%) | ||
Laminin_EGF | 1514..1562 | CDD:278482 | 0/47 (0%) | ||
LamB | 1632..1760 | CDD:214597 | 0/127 (0%) | ||
Laminin_EGF | <1775..1801 | CDD:278482 | 12/27 (44%) | ||
EGF_Lam | 1808..1851 | CDD:238012 | 24/42 (57%) | ||
EGF_Lam | 1859..1907 | CDD:214543 | 19/47 (40%) | ||
EGF_Lam | 1916..1968 | CDD:238012 | 21/56 (38%) | ||
EGF_Lam | 1969..2015 | CDD:238012 | 15/49 (31%) | ||
EGF_Lam | 2016..>2054 | CDD:238012 | 16/38 (42%) | ||
EGF_Lam | 2063..>2097 | CDD:238012 | 13/33 (39%) | ||
Laminin_I | 2129..2385 | CDD:283627 | 73/353 (21%) | ||
Tar | 2278..2662 | CDD:223910 | 93/430 (22%) | ||
Laminin_II | 2566..2700 | CDD:283628 | 22/117 (19%) | ||
LamG | 2674..2843 | CDD:238058 | |||
LamG | 2878..3029 | CDD:238058 | |||
LamG | 3078..3205 | CDD:214598 | |||
LamG | 3349..3512 | CDD:238058 | |||
LamG | 3535..3689 | CDD:238058 | |||
lamc3 | XP_687343.5 | Laminin_N | 46..268 | CDD:278484 | 75/248 (30%) |
EGF_Lam | 269..314 | CDD:238012 | 19/48 (40%) | ||
Laminin_EGF | 326..382 | CDD:278482 | 24/161 (15%) | ||
EGF_Lam | 382..426 | CDD:214543 | 20/233 (9%) | ||
Laminin_EGF | 429..476 | CDD:278482 | 15/49 (31%) | ||
Laminin_B | 540..659 | CDD:278481 | 46/507 (9%) | ||
EGF_Lam | 710..751 | CDD:238012 | 24/42 (57%) | ||
Laminin_EGF | 814..861 | CDD:278482 | 21/46 (46%) | ||
EGF_Lam | 871..921 | CDD:238012 | 15/49 (31%) | ||
Laminin_EGF | 923..971 | CDD:278482 | 18/47 (38%) | ||
EGF_Lam | 970..1010 | CDD:238012 | 14/40 (35%) | ||
ApoLp-III_like | 1233..1386 | CDD:304399 | 39/164 (24%) | ||
PspA | 1388..1607 | CDD:224755 | 50/241 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |