Sequence 1: | NP_476617.1 | Gene: | LanA / 38723 | FlyBaseID: | FBgn0002526 | Length: | 3712 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005162178.1 | Gene: | lamb2l / 553337 | ZFINID: | ZDB-GENE-030131-4205 | Length: | 1836 | Species: | Danio rerio |
Alignment Length: | 2807 | Identity: | 567/2807 - (20%) |
---|---|---|---|
Similarity: | 876/2807 - (31%) | Gaps: | 1163/2807 - (41%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 PPYFNLATGRKIYAT--ATCGQDTDGPELYCKLVGANTEHDHIDYSVIQGQVCDYCDPTVP---- 84
Fly 85 --ERNHPPENAI-----DGTEAWWQSPPLSRGMKFNEVNLTINFEQEFHVAYLFIRMGNSPRPGL 142
Fly 143 WTLEKSTDYGKTWTPWQHFSDTPADCETYFGKDTYKPITRDDDVICTTEYSKIVPLENGEIPVML 207
Fly 208 LN-----ERPSSTNYFNSTVLQEWTRATNVRIRLLRTKNLLGHLMSVARQDPTVTRRYFYSIKDI 267
Fly 268 SIGGRCMCNGHADTCDVKDPKSPVRILA----------CRCQHHTCGIQCNECCPGFEQKKWRQN 322
Fly 323 TNARPFNCEPCNCHGHSNECKYDEEVNRKGLSLDIHGHYDGGGVCQNCQHNTVGINCNKCKPKYY 387
Fly 388 RPKGKHWNETDVCSPCQCDYFFSTGHCEEETGNCECRAAFQPPSCDSCAYGYYGYPNCRECECNL 452
Fly 453 NGTNGYHCEAESGQQCPCKINFAGAYCKQCAEGYYGFPECKACECNKIGSITNDCNVTTGECKCL 517
Fly 518 TNFGGDNCERCKHGYFNYPTCSYCDCDNQGTESEICNKQSGQCICREGFGGPRCDQCLPGFYNYP 582
Fly 583 DCKPCNCSSTGSSAITCDNTGKCNCLNNFAGKQCTLCTAGYYSYPDCLPCHCDSH-----GSQGV 642
Fly 643 SCNSDGQCLCQPNFDGRQCDSCKEGFYNFP-----SCEDCNCDPAGVIDKFAGCGSVPVGELCKC 702
Fly 703 KERVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQEC 767
Fly 768 RDGTFDLDSASLFGCKDCSCDVGGSWQSVCDKISGQCKCHPRITGLACTQPLTTHFFPTLHQFQY 832
Fly 833 EYED--GSLPSGTQVRYDYDEAAFPGFSSKGYVVFNAIQNDVRNEVNVFKSSLYRIVLRYVNPNA 895
Fly 896 ENVTATISVTSDNPLEVDQHVKVLLQPTSEPQFVTVAGPLGVKPSAIVLDPGRYVFTTKANKNVM 960
Fly 961 LDYFVLLPAAYYEAGILTRHISNPCELGNMELCRHYKYASVEVFSPAA---------TPFV--IG 1014
Fly 1015 ENSKPTNPVETYTDPEHLQIVSHVGDIPVLSGSQNELHY-IVDVPRSGRYIFVIDYISDRNFPDS 1078
Fly 1079 YYINLKLKDNPDSETSVLLYPCLYSTICRTSVNEDGMEKSFYINKEDLQPVIISADIEDGSRFPI 1143
Fly 1144 ISVTAIPVDQWSIDYIN-PSPVCVIHDQQCATPKFRSVPDSKKIEFETDHEDRIATNKPPYASLD 1207
Fly 1208 ERVKLVHLDSQNEATIVIESKVDATKPNLFVILVKYYQPSHPKYQVYYTLTAGKNQYDGKFDIQH 1272
Fly 1273 CPSSSGCRGVIRPAGEGSFEIDDEFKFTITTDRSQSVWLDYLVVVPLKQYNDDLLVEETFDQTKE 1337
Fly 1338 FIQNCGHDHFHITHNASDFCKKSVFSLTADYNSGALPCNCDYAGSTSFECHPFGGQCQCKPNVIE 1402
Fly 1403 RTCGACRSRYYGFPDCKPCKCPNSAMCEPTTGECMCPPNVIGDLCEKCAPNTYGFHQVIGCEECA 1467
Fly 1468 CNPMGIANGNSQCDLFNGTCECRQNIEGRACDVCSNGYFNFPHCEQCSCHKPGTELEVCDKIDGA 1532
Fly 1533 CFCKKNVVGRDCDQCVDGTYNLQESNPDGCTTCFCFGKTSRCDSAYLRVYNVSLLKHVSITTPEF 1597
Fly 1598 HEESIKFDMWPVPADEILLNETTLKADFTLREVNDERPAYFGVLDYLLNQNNHISAYGGDLAYTL 1662
Fly 1663 HFTSGFDGKYIVAPDVILFSEHNALVHTSYEQPSRNEPFTNRVNIVESNFQTISGKPVSRADFMM 1727
Fly 1728 VLRDLKVIFIRANYWEQTLVTHLSDVYLTLADEDADGTGEYQFLAVERCSCPPGYSGHSCEDCAP 1792
Fly 1793 GYYRDPSGPYGGYCIPCECNGHSETCDCATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCM 1857
Fly 1858 ICACP-LPFDSNNFATSCEISESGDQIHCECKPGYTGPRCESCANGFYGEPESIGQVCKPCECSG 1921
Fly 1922 NINPEDQGSCDTRTGECLRCLNNTFGAACNLCAPGFYGDAIKLKNCQSCDCDDLGTQ-------- 1978
Fly 1979 -TCDPFVGVCTCHENVIGDRCDRCKPDHYGFESGVGCRACDCGAASN-STQCDPHTGHCACKSGV 2041
Fly 2042 TGRQCDRCAVDHWKYEKDGCTPCNCNQGYSRGFGCNPNTGKCQCLPGVIGDRCDACPNRWVLIKD 2106
Fly 2107 EG----CQECNNCHHALLDVTDRMRYQ-------IDSVLE--------DFNSVTL--AFFTSQKL 2150
Fly 2151 ----------NYYDQLADELEPKVKLLDPNSV----DLSPSKKANSELESDAKSYAKQVNQTLAN 2201
Fly 2202 AFDIRERSSTTL--------GNITVAYDEAVKSADQAKEAIASVEALSKNLEAAASTKIDAALEQ 2258
Fly 2259 AQHILGQINGTSIELTPNEQVLEKARKLYEEVNTLVLPIKAQNKSLNALK---NDIGEFSDHLED 2320
Fly 2321 LFNWSEASQAKSADVERRNV------------------------ANQKAFDNS-----KFDTVSE 2356
Fly 2357 QKLQAEKNIKDAGNFLINGDLTLNQINQKLDNLRDALNELNSFNKNVDEELPVREDQHKEADALT 2421
Fly 2422 DQAEQKAAE-LAIKAQDLAAQYTDMTASAEPAIKAATAYSGIVEAVEAAQKLSQDAISAAGNATD 2485
Fly 2486 KTDGIEERAHLADTGSTDLLQRARQSLQKVQDDLEPRLNASAGKVQKISAV---------NNATE 2541
Fly 2542 HQLKDIN--KLIDQL--PAESQRDMWKNSNA---NASDALEILKNVLEILEPVSVQTPKELEKAH 2599
Fly 2600 GINRDLDLTNKDVSQANKQLDDVEGSVSKLSELAEDIEEQQHRVGSQSRQLGQEIENLKAQVEAA 2664
Fly 2665 RQLANSIKVGVN 2676 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanA | NP_476617.1 | LamNT | 18..271 | CDD:214532 | 74/262 (28%) |
EGF_Lam | 272..>314 | CDD:238012 | 15/51 (29%) | ||
EGF_Lam | 332..389 | CDD:238012 | 26/56 (46%) | ||
EGF_Lam | 402..443 | CDD:238012 | 4/40 (10%) | ||
EGF_Lam | 448..491 | CDD:238012 | 0/42 (0%) | ||
Laminin_EGF | 495..543 | CDD:278482 | 2/47 (4%) | ||
Laminin_EGF | 541..589 | CDD:278482 | 2/47 (4%) | ||
Laminin_EGF | 587..634 | CDD:278482 | 0/46 (0%) | ||
EGF_Lam | 631..673 | CDD:238012 | 19/51 (37%) | ||
Laminin_EGF | 677..729 | CDD:278482 | 22/51 (43%) | ||
Laminin_EGF | 732..782 | CDD:278482 | 2/49 (4%) | ||
EGF_Lam | 785..828 | CDD:238012 | 16/42 (38%) | ||
CBM6-CBM35-CBM36_like | 831..966 | CDD:271143 | 11/136 (8%) | ||
Laminin_EGF | 1375..1423 | CDD:278482 | 14/47 (30%) | ||
EGF_Lam | 1420..1457 | CDD:238012 | 11/36 (31%) | ||
Laminin_EGF | 1466..1516 | CDD:278482 | 4/49 (8%) | ||
Laminin_EGF | 1514..1562 | CDD:278482 | 14/47 (30%) | ||
LamB | 1632..1760 | CDD:214597 | 0/127 (0%) | ||
Laminin_EGF | <1775..1801 | CDD:278482 | 0/25 (0%) | ||
EGF_Lam | 1808..1851 | CDD:238012 | 22/42 (52%) | ||
EGF_Lam | 1859..1907 | CDD:214543 | 22/48 (46%) | ||
EGF_Lam | 1916..1968 | CDD:238012 | 27/51 (53%) | ||
EGF_Lam | 1969..2015 | CDD:238012 | 19/54 (35%) | ||
EGF_Lam | 2016..>2054 | CDD:238012 | 14/38 (37%) | ||
EGF_Lam | 2063..>2097 | CDD:238012 | 14/33 (42%) | ||
Laminin_I | 2129..2385 | CDD:283627 | 55/326 (17%) | ||
Tar | 2278..2662 | CDD:223910 | 81/432 (19%) | ||
Laminin_II | 2566..2700 | CDD:283628 | 22/114 (19%) | ||
LamG | 2674..2843 | CDD:238058 | 1/3 (33%) | ||
LamG | 2878..3029 | CDD:238058 | |||
LamG | 3078..3205 | CDD:214598 | |||
LamG | 3349..3512 | CDD:238058 | |||
LamG | 3535..3689 | CDD:238058 | |||
lamb2l | XP_005162178.1 | Laminin_N | 41..266 | CDD:306548 | 71/255 (28%) |
EGF_Lam | 267..320 | CDD:238012 | 16/58 (28%) | ||
EGF_Lam | 332..384 | CDD:238012 | 26/58 (45%) | ||
Laminin_EGF | 395..452 | CDD:278482 | 26/280 (9%) | ||
EGF_Lam | 454..505 | CDD:238012 | 25/106 (24%) | ||
EGF_Lam | 506..>545 | CDD:238012 | 15/38 (39%) | ||
EGF_Lam | 816..861 | CDD:214543 | 29/135 (21%) | ||
Laminin_EGF | 864..912 | CDD:278482 | 18/296 (6%) | ||
Laminin_EGF | 910..957 | CDD:278482 | 23/46 (50%) | ||
Laminin_EGF | 960..1016 | CDD:278482 | 25/55 (45%) | ||
Laminin_EGF | 1019..1063 | CDD:278482 | 25/43 (58%) | ||
Laminin_EGF | <1089..1129 | CDD:278482 | 17/39 (44%) | ||
Laminin_EGF | 1122..1175 | CDD:278482 | 19/52 (37%) | ||
Laminin_EGF | 1175..1215 | CDD:278482 | 15/44 (34%) | ||
SMC_N | <1243..1826 | CDD:330553 | 113/623 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |