DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanA and CCDC186

DIOPT Version :9

Sequence 1:NP_476617.1 Gene:LanA / 38723 FlyBaseID:FBgn0002526 Length:3712 Species:Drosophila melanogaster
Sequence 2:NP_001308758.1 Gene:CCDC186 / 55088 HGNCID:24349 Length:898 Species:Homo sapiens


Alignment Length:647 Identity:137/647 - (21%)
Similarity:261/647 - (40%) Gaps:102/647 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  2079 NTGKCQCLPGVIGDRCDACPNRWVLIKDEGCQECNNCHHALLDVTDRMRYQIDSVLEDFNSVTLA 2143
            ||.|..|.|....:|.:|..|   .|.|.|..| ::|            .:.|:..|  ||..:|
Human    48 NTDKTLCQPNEHNNRIEAQEN---YIPDHGGGE-DSC------------AKTDTGSE--NSEQIA 94

  Fly  2144 FFTSQKLNYYDQLADELEPKVKL----LDPNSVDLSPSKKANSELESD---AKSYAKQVNQTLAN 2201
            .|.|.....:....:|.|.||..    |..::...|.::|..||...|   .|.:..::....|:
Human    95 NFPSGNFAKHISKTNETEQKVTQILVELRSSTFPESANEKTYSESPYDTDCTKKFISKIKSVSAS 159

  Fly  2202 AFDIRERSSTTLGNITVAYDEAVKSADQAKEAIASVEALSKNLEAAASTKIDAALEQAQHILGQI 2266
            . |:.|...:.|.:...|........::.:.|:...|...:          |..|:| :||:.::
Human   160 E-DLLEEIESELLSTEFAEHRVPNGMNKGEHALVLFEKCVQ----------DKYLQQ-EHIIKKL 212

  Fly  2267 NGTSIELTPNEQVLEKARKLYEEVNTLVLPIKAQNKSLNALKNDIGEFSDHLEDLFNWSEAS--Q 2329
                  :..|::..|....:..|.:.|...:|.:.::.....|.|.:....:|:|....:||  |
Human   213 ------IKENKKHQELFVDICSEKDNLREELKKRTETEKQHMNTIKQLESRIEELNKEVKASRDQ 271

  Fly  2330 AKSADVERRNVANQKAFDNSKFDTVSEQKLQAEKNIKDAGNF-LINGD---LTLNQINQKLD-NL 2389
            ..:.||..:|...|...:.::....:.:|.:..:..|:|... .:.|:   |.|.:..:.|: .|
Human   272 LIAQDVTAKNAVQQLHKEMAQRMEQANKKCEEARQEKEAMVMKYVRGEKESLDLRKEKETLEKKL 336

  Fly  2390 RDALNELNSFNKNVDEELPVREDQHKEADALTDQAEQKAAELAIKAQDLAAQYTDMTASAEPAIK 2454
            |||..||.. |.|..::|      .:|...|....|.|..|.....:::.....|:.:.   .||
Human   337 RDANKELEK-NTNKIKQL------SQEKGRLHQLYETKEGETTRLIREIDKLKEDINSH---VIK 391

  Fly  2455 AATAYSGIVEAVEAAQKLSQDAISAAGNATDKTDGIEERAHLADTGSTDLLQRARQSLQKVQDDL 2519
            ...|.:.: :|...:.|.::|.:.   ..|.|....:|.|........|:::..::|.:...::|
Human   392 VKWAQNKL-KAEMDSHKETKDKLK---ETTTKLTQAKEEADQIRKNCQDMIKTYQESEEIKSNEL 452

  Fly  2520 EPRLNASAGKVQKISAVNNATEHQLKDINKLIDQLPAE-SQRDMWKNSNANASDALEILKNVLEI 2583
            :.:|..:.|:::|          |:::.:..::...|: .:.:..|.:.....|.|..|:..::.
Human   453 DAKLRVTKGELEK----------QMQEKSDQLEMHHAKIKELEDLKRTFKEGMDELRTLRTKVKC 507

  Fly  2584 LEPVSVQTPKELEKAHGINRDLDLTNKDVSQANKQLDDVEGSVSKLSELAEDIEEQQHRVGSQSR 2648
            ||...::|..||.|...|             .|:|..:::..:.|: :.|:.::||..| |.   
Human   508 LEDERLRTEDELSKYKEI-------------INRQKAEIQNLLDKV-KTADQLQEQLQR-GK--- 554

  Fly  2649 QLGQEIENLKAQVEAARQLANSIK---VGVNFKPSTIL---ELKTPEKTKLLATRTNLSTYF 2704
               |||||||.:||:...|.|.::   .|...:.|.:|   |..|.:..:|.:...:|.:.|
Human   555 ---QEIENLKEEVESLNSLINDLQKDIEGSRKRESELLLFTERLTSKNAQLQSESNSLQSQF 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanANP_476617.1 LamNT 18..271 CDD:214532
EGF_Lam 272..>314 CDD:238012
EGF_Lam 332..389 CDD:238012
EGF_Lam 402..443 CDD:238012
EGF_Lam 448..491 CDD:238012
Laminin_EGF 495..543 CDD:278482
Laminin_EGF 541..589 CDD:278482
Laminin_EGF 587..634 CDD:278482
EGF_Lam 631..673 CDD:238012
Laminin_EGF 677..729 CDD:278482
Laminin_EGF 732..782 CDD:278482
EGF_Lam 785..828 CDD:238012
CBM6-CBM35-CBM36_like 831..966 CDD:271143
Laminin_EGF 1375..1423 CDD:278482
EGF_Lam 1420..1457 CDD:238012
Laminin_EGF 1466..1516 CDD:278482
Laminin_EGF 1514..1562 CDD:278482
LamB 1632..1760 CDD:214597
Laminin_EGF <1775..1801 CDD:278482
EGF_Lam 1808..1851 CDD:238012
EGF_Lam 1859..1907 CDD:214543
EGF_Lam 1916..1968 CDD:238012
EGF_Lam 1969..2015 CDD:238012
EGF_Lam 2016..>2054 CDD:238012
EGF_Lam 2063..>2097 CDD:238012 6/17 (35%)
Laminin_I 2129..2385 CDD:283627 52/268 (19%)
Tar 2278..2662 CDD:223910 81/391 (21%)
Laminin_II 2566..2700 CDD:283628 35/139 (25%)
LamG 2674..2843 CDD:238058 8/34 (24%)
LamG 2878..3029 CDD:238058
LamG 3078..3205 CDD:214598
LamG 3349..3512 CDD:238058
LamG 3535..3689 CDD:238058
CCDC186NP_001308758.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..95 10/44 (23%)
SMC_N 208..>594 CDD:330553 90/436 (21%)
SMC_N 454..>737 CDD:330553 43/191 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 702..749
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1836
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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