DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanA and NTN3

DIOPT Version :10

Sequence 1:NP_476617.1 Gene:LanA / 38723 FlyBaseID:FBgn0002526 Length:3712 Species:Drosophila melanogaster
Sequence 2:NP_006172.1 Gene:NTN3 / 4917 HGNCID:8030 Length:580 Species:Homo sapiens


Alignment Length:428 Identity:122/428 - (28%)
Similarity:190/428 - (44%) Gaps:72/428 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PPYFNLATGRKIYATATCGQDTDGPELYCKLVGANTEHDHIDYSVIQGQVCDYCDPTVPERNHPP 90
            |...|.|.||::.|::|||:...                         :.||..|   |.|.|.|
Human    42 PGLVNAALGREVLASSTCGRPAT-------------------------RACDASD---PRRAHSP 78

  Fly    91 E--NAIDGTEA--WWQSPPLSRGMKFNEVNLTINFEQEFHVAYLFIRMGNSPRPGLWTLEKSTDY 151
            .  .:..||.:  .|:|..|.|...  .|.||:...:.|.:.::.:|..::| |....|.||.|:
Human    79 ALLTSPGGTASPLCWRSESLPRAPL--NVTLTVPLGKAFELVFVSLRFCSAP-PASVALLKSQDH 140

  Fly   152 GKTWTPWQHFSDTPADCETYFGK---DTYKPITRDDDVICTTEYSKIVPLE----NGEIPVMLLN 209
            |::|.|...||   :.|:..:|:   ....|.....:.:|..     .||.    :|.:...:.:
Human   141 GRSWAPLGFFS---SHCDLDYGRLPAPANGPAGPGPEALCFP-----APLAQPDGSGLLAFSMQD 197

  Fly   210 ERPSSTNYFNSTVLQEWTRATNVRIRLLRTKNLLGHLMSVA--RQDPTVTRRYFYSIKDISIGGR 272
            ..|...:..:|.|||:|..||:||:.|.|.        |.|  .:|......|.|:..|:.:|||
Human   198 SSPPGLDLDSSPVLQDWVTATDVRVVLTRP--------STAGDPRDMEAVVPYSYAATDLQVGG
R 254

  Fly   273 CMCNGHADTCDVKDPKSPVRILACRCQHHTCGIQCNECCPGFEQKKWRQNTNARPFNCEPCNCHG 337
            |.|||||..| :.|.:..   |.|.|:|.|.|..|..|.|.:..:.|::.|......|..|:|:|
Human   255 CKCNGHASRC-LLDTQGH---LICDCRHGTEGPDCGRCKPFYCDRPWQR
ATARESHACLACSCNG 315

  Fly   338 HSNECKYDEEVNRKGLSLDIHGHYDGGGVCQNCQHNTVGINCNKCKPKYYRPKGKHWNETDVCSP 402
            |:..|:::.|:.|      :.|. ..||||.||:|||.|.:|:.|:..:||..|:..::...|..
Human   316 HARRCRFNMELYR------LSGR-RSGGVCLNCRHNTAGRHCHYCREGFYRDPG
RALSDRRACRA 373

  Fly   403 CQCDYFFSTGH-CEEETGNCECRAAFQPPSCDSCAYGY 439
            |.|....:.|. |.:.||.|.|:......:|:.||.|:
Human   374 CDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPGF 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanANP_476617.1 LamNT 18..271 CDD:214532 63/257 (25%)
EGF_Lam 272..>314 CDD:238012 18/41 (44%)
EGF_Lam 332..389 CDD:238012 21/56 (38%)
EGF_Lam 402..443 CDD:238012 12/39 (31%)
Laminin_EGF 448..497 CDD:395007
Laminin_EGF 495..543 CDD:395007
Laminin_EGF 541..589 CDD:395007
Laminin_EGF 587..634 CDD:395007
Laminin_EGF 632..679 CDD:395007
Laminin_EGF 677..729 CDD:395007
Laminin_EGF 732..782 CDD:395007
EGF_Lam 785..828 CDD:238012
CBM6-CBM35-CBM36_like 831..966 CDD:271143
Laminin_EGF 1375..1423 CDD:395007
EGF_Lam 1420..1457 CDD:238012
Laminin_EGF 1466..1516 CDD:395007
Laminin_EGF 1514..1562 CDD:395007
LamB 1632..1760 CDD:214597
Laminin_EGF <1775..1801 CDD:395007
EGF_Lam 1808..1851 CDD:238012
EGF_Lam 1859..1907 CDD:214543
EGF_Lam 1916..1968 CDD:238012
EGF_Lam 1969..2015 CDD:238012
EGF_Lam 2016..>2054 CDD:238012
EGF_Lam 2063..>2097 CDD:238012
Laminin_I 2134..2385 CDD:310534
SMC_prok_B 2356..>2705 CDD:274008
Laminin_II 2566..2700 CDD:368703
LamG 2674..2843 CDD:238058
LamG 2878..3029 CDD:238058
LamG 3078..3205 CDD:214598
LamG 3349..3512 CDD:238058
LamG 3535..3689 CDD:238058
NTN3NP_006172.1 LamNT 34..253 CDD:214532 63/257 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 62..83 7/48 (15%)
EGF_Lam 254..299 CDD:238012 19/48 (40%)
Laminin_EGF 311..362 CDD:395007 22/57 (39%)
EGF_Lam 373..422 CDD:238012 12/39 (31%)
NTR_like 456..562 CDD:470599
Cell attachment site, atypical. /evidence=ECO:0000255 500..502
Blue background indicates that the domain is not in the aligned region.

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