Sequence 1: | NP_476617.1 | Gene: | LanA / 38723 | FlyBaseID: | FBgn0002526 | Length: | 3712 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101707.2 | Gene: | Lama1 / 316758 | RGDID: | 1307207 | Length: | 3083 | Species: | Rattus norvegicus |
Alignment Length: | 4123 | Identity: | 941/4123 - (22%) |
---|---|---|---|
Similarity: | 1461/4123 - (35%) | Gaps: | 1462/4123 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 GHGVASIGALLVILA------ISYCQAELTPPYFNLATGRKIYATATCGQDTDGPELYCKLVGAN 60
Fly 61 TEHDHIDYSVIQGQVCDYCD--PTVPERNHPPENAIDGTEAWWQSPPLSRGMKFNEVNLTINFEQ 123
Fly 124 EFHVAYLFIRMGNSPRPGLWTLEKSTDYGKTWTPWQHFSDTPADCETYF------GKDTYKPITR 182
Fly 183 DDDVICTTEYSKIVPLENGEIPVMLLNERPSSTNYFNSTVLQEWTRATNVRIRLLRTKNLLGHLM 247
Fly 248 SVARQ-----DPTVTRRYFYSIKDISIGGRCMCNGHADTCDVKDPKSPVRILACRCQHHTCGIQC 307
Fly 308 NECCPGFEQKKWRQNTNARPFNCEPCNCHGHSNECKYDEEVNRKGLSLDIHGHYDGGGVCQNCQH 372
Fly 373 NTVGINCNKCKPKYYRPKGKHWNETDVCSPCQCDYFFSTG--------HCE----EETGNCECRA 425
Fly 426 AFQPPSCDSCAYGYYGYPNCRECECNLNGT-NGYHCEAESGQQCPCKINFAGAYCKQCAEGYYGF 489
Fly 490 PE-----CKACECNKIGSITNDCNVTTGECKCLTNFGG----------------DNCERCKH--- 530
Fly 531 ------------------------------GYFNYPTCSY--------------CDCDNQGTESE 551
Fly 552 ICNKQSG---------------------------------------------------------- 558
Fly 559 ------------------------QCICREGFGGPRCDQCLPGFYNYPD------CKPCNCSSTG 593
Fly 594 SSAITCDNTGKCN-CLNNFAGKQCTLCTAGYYSYP------DCLPCHC----DSHG--------- 638
Fly 639 SQGVSCNSDGQCLCQPNFDGRQCDSCKEGFYNFP-----SCEDCNCDPAGVIDKF-AG-CGSVPV 696
Fly 697 GELCKCKERVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPCKPHTQG 761
Fly 762 RRCQECRDGTFDLDSASLFGCKDCSCDVGGSWQSVCDKISGQCKCHPRITGLACTQPLTTHFFPT 826
Fly 827 LHQFQYEYEDGSLPSGTQVRYDYDEAAFPGFSSKGYVVFNAIQNDVRNEVNVFKSSLYRIVLRYV 891
Fly 892 NPNAENVTATISVTSDNPLEVDQHVKVLLQPTSEPQFVTVAGPLGVKPSAIVLDPGRYVFTTKAN 956
Fly 957 KNVMLDYFVLLPAAYYEAGILTRHISNPCELGNMELCRHYKYASVEVFSPAATPFVIGENSKPTN 1021
Fly 1022 PVETYTDPEHLQIVSHVGDIPVLSGSQNELHYIVDVPRSGRYIFVIDYISDRNFPDSYYINLKLK 1086
Fly 1087 DNPDSETSVLLYPCLYSTICRTSVNEDGMEKSFYINKEDLQPVIISADIEDGSRFPIISVTAIPV 1151
Fly 1152 DQWSIDYINPSPVCVIHDQQCATPKFRSVPDSKKIEFETDHEDRIATNKPPYASLDERVKLVHLD 1216
Fly 1217 SQNEATIVIESKVDATKPNLFVILVKYYQPSHPKYQVYYTLTAGKNQYDGKFDIQHCPSSSGCRG 1281
Fly 1282 VIRPAGEGSFEIDDEFKFTITTDRSQSVWLDYLVVVPLKQYNDDLLVEETFDQTKEFIQNCGHDH 1346
Fly 1347 FHITHNASDFCKKSVFSLTADYNSGALPCNCDYAGSTSFECHPFGGQCQCKPNVIERTCGACRSR 1411
Fly 1412 YYGFPD--CKPCKCPNSA-MCEPTTGECMCPPNVIGDLCEKCAPNTYGFHQVIGCEECACNPMGI 1473
Fly 1474 ANGNSQCDLFNGTCECRQNIEGRACDVCSNGYFNFPHCEQCSCHKPGTELEVCD---------KI 1529
Fly 1530 DGACFCKKNVVGRDCDQCVDGTYNLQESNPDGCTTCFCFGKTSRC---------------DSAYL 1579
Fly 1580 RVYNVSLLKHVSITTPEFHEESIKFDMWPVPADEILLNETTLKADFTLREVNDERPAYFGVLDYL 1644
Fly 1645 LNQNNHISAYGGDLAYTLHF-------TSGFDGK-------------YIVAPDVILFSEHNALVH 1689
Fly 1690 TSYEQPSRNEPFTNRVNIVESNFQTISGKPVSRADFMMVLRDLKVIFIRANYWEQTLVTHLSDVY 1754
Fly 1755 LTLADEDADGTGEYQF-LAVERCSCPPGYSGHSCEDCAPGYYR----DPSG----PYGGYCIPCE 1810
Fly 1811 CNGHSETCDCATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICACP--LPFDSNNFATS 1873
Fly 1874 CEISESGDQIHCE-CKPGYTGPRCESCANGFYGEPESIGQVCKPCECSGNINPEDQGSCDTRTGE 1937
Fly 1938 CLRCLNNTFGAACNLCAPGFYGDAIKLKNCQSCDCDDLGTQTCDPFVGVCTCHENVIGDRCDRCK 2002
Fly 2003 PDHYGFESGVGCRACDCGAASNSTQCDPHTGHCACKSGVTGRQCDRCAVDHWKYEKDGCTPCNCN 2067
Fly 2068 QGYSRGFGCNPNTGKCQCLPGVIGDRCDACPNRWVLIKDEGCQECNN-CHHALLDVTDRMRYQID 2131
Fly 2132 SVLEDFNSVTLAFFTSQKLNYYDQLADELEPKVK-----LLDPNSVDLSPSKKANSE-----LES 2186
Fly 2187 DAKSYAKQVNQTLANAFDIR---ERSSTTLGNITVAYDEAVKSADQAKEAIA------------- 2235
Fly 2236 --SVEALSKNLEAAASTKIDAALEQAQHILGQINGTSIELTPNEQVLEKARKLYEEVNTLVLPIK 2298
Fly 2299 AQNKSLNALKNDIGEFSDHLEDLFNWSEASQAKSADVERRNV------ANQKAFDNSKFDTVSEQ 2357
Fly 2358 KL------QAEKNIKDAGNFLINGDLTLNQINQKLDNLRDALNELNSFNKNVDEELPVREDQHKE 2416
Fly 2417 ADALTDQAEQKAAELAIKAQDLAAQYTDMTASAEPAIKAATAYSGIVEAVEAAQKLSQDAISAAG 2481
Fly 2482 NATDKTDGIEERAHLADTGSTDLLQRARQSLQKVQDDLEPRLNASAGKVQKISAVNNATEHQLKD 2546
Fly 2547 INKLIDQLPAESQRDMWKNSNANASDALEIL-----------KNVLEILEPVSVQTPKELEKAHG 2600
Fly 2601 INRDLDLTNKDVSQAN---KQLDDVEGSVSKLSELA----EDIEEQQHRVGSQSRQLGQEIENL- 2657
Fly 2658 ------KAQVEAARQLANSIKVGVNFKPSTILELKTPEKTKLLATRTNLSTYF---RTTEPSGFL 2713
Fly 2714 LYLGNDNKTAQKNNDFVAVEIVNGYPILTIDLGNGPERIT-SDKYVADGRWYQAVVDRMGPNAKL 2777
Fly 2778 TIREELPNGD-VVEHSKSGYLEGSQNILHVDKNSRLFVGGYPGISDFNAPPDLTTNSFSGDIEDL 2841
Fly 2842 KIGDESVGLWNFV---------YGDDNDQGARERDVLLEKKKPVTGLRFKGNGY-VQLNATSNLK 2896
Fly 2897 SRSSIQFSFKADKDTSNGLLFFYGRD--KHYMSIEMIDGAIFFNISLGEGGGVQSGSQDRYNDNQ 2959
Fly 2960 WHKVQAERENRNGLLKVDDIVISRTNAPLEADL-----ELPKLRR--LYFGG--HPRRLNTSISL 3015
Fly 3016 QPNFDGCIDNVVINQGVVDLTEYVTGGGVEEGCSAKFSTVVSYAPHEYGFLRMNNVSSDNNLHVV 3080
Fly 3081 LHFKTTQPNGVLFYAANHDQ--------------------------SSTIGLSLQDGLLKLNSMG 3119
Fly 3120 SQLVIDDRILNDGEDHVVTVQHTQGELRLTVDDVDNKRLGSPQPL----ILEG-----GDIFFAG 3175
Fly 3176 LPDNYRTPRNALASLAYFVGCISDVTVNEEIINFANSAEKKNGNINGCPPHVLAYEPSLVPSYYP 3240
Fly 3241 SGDNEVESPWSNADTLPPLKPDIESTLPPTTPTTTTTTTTTTTSTTTTSTTTTTTTPSPIVIDEE 3305
Fly 3306 KEIEAKTPQKILTTRPPAKLNLPSDERCKLPEQPNFDVDFTEAGYRFYGLREQRLQINS---LPV 3367
Fly 3368 K---VRRHHDIGISFRTERPNGLLIYAGSKQRDDFIAVYLLDGRVTYEIRVGAQLQAKITTEAEL 3429
Fly 3430 NDGTWHTVEVVRTQRKVSLLIDKLEQPGSVDLNAERSAPVLAVELPIYLGGVNKFLESEVKNLTD 3494
Fly 3495 FKTEVPYFNGCLKNIKFDA--MDLETPPEEFGVVPCSEQVERGLFFNNQKAFVKIFDHFDVGTEM 3557
Fly 3558 KISFDFRPRDPNGLLFSVHGKNSYAI-LELVDNTLYFTVKTDLKNIVSTNYKLPNNESFCDGKTR 3621
Fly 3622 NVQAIKSKFVINIAVDFISSNPGVGNEGSVITRTNRPLFLGGHVAFQRAPGIKTKKSFKGCISKV 3686
Fly 3687 EVNQ----RMINITPNMVVGDIWQGYCP 3710 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanA | NP_476617.1 | LamNT | 18..271 | CDD:214532 | 112/265 (42%) |
EGF_Lam | 272..>314 | CDD:238012 | 17/41 (41%) | ||
EGF_Lam | 332..389 | CDD:238012 | 28/56 (50%) | ||
EGF_Lam | 402..443 | CDD:238012 | 16/52 (31%) | ||
EGF_Lam | 448..491 | CDD:238012 | 14/43 (33%) | ||
Laminin_EGF | 495..543 | CDD:278482 | 14/110 (13%) | ||
Laminin_EGF | 541..589 | CDD:278482 | 17/135 (13%) | ||
Laminin_EGF | 587..634 | CDD:278482 | 19/53 (36%) | ||
EGF_Lam | 631..673 | CDD:238012 | 15/59 (25%) | ||
Laminin_EGF | 677..729 | CDD:278482 | 16/53 (30%) | ||
Laminin_EGF | 732..782 | CDD:278482 | 7/49 (14%) | ||
EGF_Lam | 785..828 | CDD:238012 | 14/42 (33%) | ||
CBM6-CBM35-CBM36_like | 831..966 | CDD:271143 | 2/134 (1%) | ||
Laminin_EGF | 1375..1423 | CDD:278482 | 20/49 (41%) | ||
EGF_Lam | 1420..1457 | CDD:238012 | 15/37 (41%) | ||
Laminin_EGF | 1466..1516 | CDD:278482 | 19/49 (39%) | ||
Laminin_EGF | 1514..1562 | CDD:278482 | 21/56 (38%) | ||
LamB | 1632..1760 | CDD:214597 | 35/147 (24%) | ||
Laminin_EGF | <1775..1801 | CDD:278482 | 18/33 (55%) | ||
EGF_Lam | 1808..1851 | CDD:238012 | 23/42 (55%) | ||
EGF_Lam | 1859..1907 | CDD:214543 | 19/50 (38%) | ||
EGF_Lam | 1916..1968 | CDD:238012 | 2/51 (4%) | ||
EGF_Lam | 1969..2015 | CDD:238012 | 5/45 (11%) | ||
EGF_Lam | 2016..>2054 | CDD:238012 | 11/37 (30%) | ||
EGF_Lam | 2063..>2097 | CDD:238012 | 0/33 (0%) | ||
Laminin_I | 2129..2385 | CDD:283627 | 58/295 (20%) | ||
Tar | 2278..2662 | CDD:223910 | 94/420 (22%) | ||
Laminin_II | 2566..2700 | CDD:283628 | 35/158 (22%) | ||
LamG | 2674..2843 | CDD:238058 | 46/173 (27%) | ||
LamG | 2878..3029 | CDD:238058 | 44/162 (27%) | ||
LamG | 3078..3205 | CDD:214598 | 33/161 (20%) | ||
LamG | 3349..3512 | CDD:238058 | 43/168 (26%) | ||
LamG | 3535..3689 | CDD:238058 | 44/154 (29%) | ||
Lama1 | NP_001101707.2 | LamNT | 25..275 | CDD:214532 | 112/263 (43%) |
EGF_Lam | 277..324 | CDD:238012 | 22/49 (45%) | ||
Laminin_EGF | 404..463 | CDD:278482 | 19/58 (33%) | ||
Laminin_EGF | 461..507 | CDD:278482 | 15/49 (31%) | ||
Laminin_B | 575..703 | CDD:278481 | 9/128 (7%) | ||
EGF_Lam | <715..739 | CDD:214543 | 10/23 (43%) | ||
EGF_Lam | 748..796 | CDD:238012 | 17/50 (34%) | ||
Laminin_EGF | 798..853 | CDD:278482 | 14/59 (24%) | ||
EGF_Lam | 855..907 | CDD:238012 | 23/108 (21%) | ||
Laminin_EGF | 909..955 | CDD:278482 | 20/586 (3%) | ||
Laminin_EGF | 958..1005 | CDD:278482 | 18/47 (38%) | ||
EGF_Lam | 1004..1049 | CDD:238012 | 17/44 (39%) | ||
Laminin_EGF | 1051..1099 | CDD:278482 | 19/49 (39%) | ||
Laminin_EGF | 1097..1154 | CDD:278482 | 21/56 (38%) | ||
Laminin_B | 1225..1351 | CDD:278481 | 33/141 (23%) | ||
Laminin_EGF | 1410..1456 | CDD:278482 | 25/46 (54%) | ||
Laminin_EGF | 1459..1513 | CDD:278482 | 23/110 (21%) | ||
Laminin_EGF | 1516..>1553 | CDD:278482 | 16/82 (20%) | ||
Laminin_I | 1574..1825 | CDD:283627 | 54/276 (20%) | ||
SPEC | 1613..1861 | CDD:295325 | 50/272 (18%) | ||
Laminin_I | 1838..2092 | CDD:283627 | 64/285 (22%) | ||
Laminin_II | 2018..2152 | CDD:283628 | 33/139 (24%) | ||
LamG | 2136..2285 | CDD:238058 | 44/164 (27%) | ||
LamG | 2314..2470 | CDD:238058 | 44/161 (27%) | ||
LamG | 2495..2659 | CDD:238058 | 38/182 (21%) | ||
Laminin_G_1 | 2751..2880 | CDD:278483 | 34/137 (25%) | ||
LamG | 2900..3053 | CDD:238058 | 43/153 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 87 | 1.000 | Domainoid score | I7820 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |