Sequence 1: | NP_476617.1 | Gene: | LanA / 38723 | FlyBaseID: | FBgn0002526 | Length: | 3712 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001296376.1 | Gene: | Lama4 / 309816 | RGDID: | 1560062 | Length: | 1817 | Species: | Rattus norvegicus |
Alignment Length: | 2082 | Identity: | 498/2082 - (23%) |
---|---|---|---|
Similarity: | 807/2082 - (38%) | Gaps: | 477/2082 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 1779 PPGYSGHSCEDCAPGYYRDPSGPYGGYCIPCECNGHSETCDCATGICSKCQHGTEGDHCERCVSG 1843
Fly 1844 YYGNATNGTPGDCMICACPLPFDSNNFATSCEISESGDQIHCECKPGYTGPRCESCANGFYGEPE 1908
Fly 1909 SIGQVCKPCECSGNINP----EDQGSCDTRTGECLRCLNNTFGAACNLCAPGFYGDAIKLKNCQS 1969
Fly 1970 CDCDDLGTQTCDPFVGVCTCHENVIGDRCDRCKPDHYGFESGVGCRACDCGAASNSTQCDPHTGH 2034
Fly 2035 CACKSGVTGRQCDRCAVDHWKYEKDGCTPCNCNQGYSRGFGCNPNTGKCQCLPGVIGDRCDACPN 2099
Fly 2100 RWVLIKDEGCQECNNCHHALLDVTDRMRYQIDSVLE-------------------DFNSVTLAFF 2145
Fly 2146 T--SQKLNYYDQLADELEPKVKLLDPNSVDLSPSKKANSELESDAKSYAKQVNQTLANAFDIRER 2208
Fly 2209 SSTTLGNITVAYDEAVKSADQAKEAIASVEALSKNLEAAASTKIDAALEQAQHILGQINGTSIEL 2273
Fly 2274 TPNEQVLEKA-------------RKLYEEVNTLVLPIKAQ-----NKSLNALKNDIGEFSDHLED 2320
Fly 2321 LFNWSEASQAKSADVERRNVANQKAFDNSKFDTVSEQKLQAEKNIKDAGNFLINGDLTLNQINQK 2385
Fly 2386 LDN-------LRDALNELNSFNKNVDEELPVREDQHKEADALTDQAEQKAAELAIKAQDLAAQYT 2443
Fly 2444 DMTASAEPAIKAATAYSGIVEAVEAAQKLSQDAISAAGNATDKTDGIEERAHLADTGSTDLLQRA 2508
Fly 2509 RQSLQKVQDDLEPRLNASAGKVQKISAVNNA--TEHQLKD-INKLIDQLPAESQRDMWKNSNANA 2570
Fly 2571 SDALEILKNVLEILEPVS--------VQTPKELEKAHGI-NRDLDLTNKDVSQANKQLDDVEGSV 2626
Fly 2627 SKLSELAEDIEEQQHRVGSQSR---QLGQEIENLKAQVEAARQLANSIKVGVNFKPSTILELKTP 2688
Fly 2689 EKTKLLATRTNLSTYF----RTTEPSG------FLLYLGNDNKTAQKNNDFVAVEIVNGYPILTI 2743
Fly 2744 DLGNGPERITSD-KYVADGRWYQAVV--DRMGPNAK--LTIREELPNGDVVEHSKSGYLEGSQNI 2803
Fly 2804 LHVDKNSRLF-VGGYPGISDFNAPPDLTTNSFSGDIEDLKIGDESVGLWNF--VYGDDNDQGAR- 2864
Fly 2865 ERDVLLEKKKPVTGLRFKGNGY-VQLNATSNLKSRSSIQFSFKADKDTSNGLLFFYGRDKHYMSI 2928
Fly 2929 EMIDGAIFFNISLGEG-------GGVQSG--------SQDRYNDNQWHKVQAERENRNGLLKVDD 2978
Fly 2979 IVISRTNAPLEADLELPKL--RRLYFGGHP------RRLNTSISLQPNFDGCIDNVVINQGVVDL 3035
Fly 3036 TEYVTGGGVEEGCSAKFSTVVSYAPHEYG---FLRMNNVSSDNNLHVVLHFKTTQPNGVLFYAAN 3097
Fly 3098 HDQSSTIGLSLQDGLLKLNSMGSQLVIDDRILNDGEDH--VVTVQHTQGELRLTVDDVDNKRLGS 3160
Fly 3161 PQPLILEG---------GDIFFAGLPDNYRTPRNALASLAYFVGCISDVTVNE-----EIINFAN 3211
Fly 3212 SAEKKNGNINGCP----PHVLAYEP---SLVPSYYPSGDNEVESP-WSNADTLPPLKPDIESTLP 3268
Fly 3269 PTTPTTTTTTTTTTTSTTTTSTTTTTTTPSPIVIDEEKEIEAKTPQKILTTRPPAKLNLPSDERC 3333
Fly 3334 KLPEQPNFDVDFTEAGYRFYGLREQRLQINSLPVKVRRHHDIGISFRTERPNGLLIYAGSKQRDD 3398
Fly 3399 FIAVYLLDGRVTYEIRVGAQLQAKITTEAELNDGTWHTVEVVRTQRKVSLLIDKLEQPGSVDLNA 3463
Fly 3464 ERSAPVLA---VELPIYLGGVNKFLESEVKNLTDFKTEVPYFNGCLKNIKFDAMDLETPPEEFGV 3525
Fly 3526 VPCSE-QVERGLFFNNQKAFVKIFDHFDVGTEMKISFDFRPRDPNGLL----------FSVHGKN 3579
Fly 3580 SYAILELVDNTLYFTVKTDLKNIVSTNYKLPNNESFCDGKTRNVQAIKSKFVINIAVDFISSNPG 3644
Fly 3645 VGNEGSVITRTNRPLFLGGHVAFQRAPGIKTKKSFKGCISKVEVNQRMINIT-PNMVVGDIWQGY 3708
Fly 3709 CP 3710 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanA | NP_476617.1 | LamNT | 18..271 | CDD:214532 | |
EGF_Lam | 272..>314 | CDD:238012 | |||
EGF_Lam | 332..389 | CDD:238012 | |||
EGF_Lam | 402..443 | CDD:238012 | |||
EGF_Lam | 448..491 | CDD:238012 | |||
Laminin_EGF | 495..543 | CDD:278482 | |||
Laminin_EGF | 541..589 | CDD:278482 | |||
Laminin_EGF | 587..634 | CDD:278482 | |||
EGF_Lam | 631..673 | CDD:238012 | |||
Laminin_EGF | 677..729 | CDD:278482 | |||
Laminin_EGF | 732..782 | CDD:278482 | |||
EGF_Lam | 785..828 | CDD:238012 | |||
CBM6-CBM35-CBM36_like | 831..966 | CDD:271143 | |||
Laminin_EGF | 1375..1423 | CDD:278482 | |||
EGF_Lam | 1420..1457 | CDD:238012 | |||
Laminin_EGF | 1466..1516 | CDD:278482 | |||
Laminin_EGF | 1514..1562 | CDD:278482 | |||
LamB | 1632..1760 | CDD:214597 | |||
Laminin_EGF | <1775..1801 | CDD:278482 | 7/21 (33%) | ||
EGF_Lam | 1808..1851 | CDD:238012 | 21/42 (50%) | ||
EGF_Lam | 1859..1907 | CDD:214543 | 24/47 (51%) | ||
EGF_Lam | 1916..1968 | CDD:238012 | 29/55 (53%) | ||
EGF_Lam | 1969..2015 | CDD:238012 | 11/45 (24%) | ||
EGF_Lam | 2016..>2054 | CDD:238012 | 3/37 (8%) | ||
EGF_Lam | 2063..>2097 | CDD:238012 | 0/33 (0%) | ||
Laminin_I | 2129..2385 | CDD:283627 | 56/294 (19%) | ||
Tar | 2278..2662 | CDD:223910 | 90/423 (21%) | ||
Laminin_II | 2566..2700 | CDD:283628 | 31/145 (21%) | ||
LamG | 2674..2843 | CDD:238058 | 50/184 (27%) | ||
LamG | 2878..3029 | CDD:238058 | 37/174 (21%) | ||
LamG | 3078..3205 | CDD:214598 | 41/142 (29%) | ||
LamG | 3349..3512 | CDD:238058 | 46/165 (28%) | ||
LamG | 3535..3689 | CDD:238058 | 38/163 (23%) | ||
Lama4 | NP_001296376.1 | EGF_Lam | 81..130 | CDD:238012 | 23/48 (48%) |
EGF_Lam | 131..185 | CDD:238012 | 27/56 (48%) | ||
EGF_Lam | 187..238 | CDD:238012 | 28/53 (53%) | ||
Laminin_I | 289..547 | CDD:283627 | 54/285 (19%) | ||
SPEC | 314..523 | CDD:295325 | 46/236 (19%) | ||
ApoLp-III_like | 610..798 | CDD:304399 | 46/209 (22%) | ||
Laminin_II | 727..854 | CDD:283628 | 27/131 (21%) | ||
LamG | 853..1008 | CDD:214598 | 46/161 (29%) | ||
LamG | 1044..1202 | CDD:238058 | 37/173 (21%) | ||
LamG | 1232..1372 | CDD:238058 | 43/155 (28%) | ||
LamG | 1483..1618 | CDD:238058 | 43/145 (30%) | ||
LamG | 1642..1793 | CDD:238058 | 38/163 (23%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 60 | 1.000 | Domainoid score | I10319 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1919at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
6 | 5.780 |