Sequence 1: | NP_476617.1 | Gene: | LanA / 38723 | FlyBaseID: | FBgn0002526 | Length: | 3712 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038954896.1 | Gene: | Lama2 / 309368 | RGDID: | 1308889 | Length: | 3121 | Species: | Rattus norvegicus |
Alignment Length: | 4088 | Identity: | 950/4088 - (23%) |
---|---|---|---|
Similarity: | 1449/4088 - (35%) | Gaps: | 1410/4088 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 LLVILAI----------------SYCQAELTPPYFNLATGRKIYATATCGQDTDGPELYCKLVGA 59
Fly 60 NTEHDHIDYSVIQGQVCDYC--DPTVPERNHPPENAIDGTEAWWQSPPLSRGMKFNEVNLTINFE 122
Fly 123 QEFHVAYLFIRMGNSPRPGLWTLEKSTDYGKTWTPWQHFSDTPADCETYF------GKDTYKPIT 181
Fly 182 RDDDVICTTEYSKIVPLENGEIPVMLLNERPSSTNYFNSTVLQEWTRATNVRIRLLRTKNLLGHL 246
Fly 247 MSVARQ-----DPTVTRRYFYSIKDISIGGRCMCNGHADTCDVKDP---KSPVRILACRCQHHTC 303
Fly 304 GIQCNECCPGFEQKKWRQNTNARPFNCEPCNCHGHSNECKYDEEVNRKGLSLDIHGHYDGGGVCQ 368
Fly 369 NCQHNTVGINCNKCKPKYYRPKGKHWNETDVCSPCQCDYFFSTGH-C---EEET------GNCEC 423
Fly 424 RAAFQPPSCDSCAYGYYGYPNCRECECN-LNGTNGYHCEAESGQQCPCKINFAGAYCKQCAEGYY 487
Fly 488 GFPE-----CKACEC-------------------------------------------------- 497
Fly 498 ----------------------NKIGSI------------------------------TNDCNVT 510
Fly 511 TG--------------------------------------------------------------- 512
Fly 513 ----------------------ECKCLTNFGGDNCERC--KHGYFNYP----TCSYCDCDNQGTE 549
Fly 550 SEICNKQSGQCI-CREGFGGPRCDQCLPGFYNYP------DCKPCNCSSTGSSAITCDNTGKCNC 607
Fly 608 LNNFAGKQCTLCTAGYYSYPDCLPCHCDSHGSQGVSCNSDGQCLCQPNFDGRQCDSCKEGFYNFP 672
Fly 673 SCEDCNCDPAGVIDKFAGCGSVPVGELCKCKERVTGRICNECKPLYWNLNISNTEGCEICDCWTD 737
Fly 738 GTISALDTCTSKSGQC-PCKPHTQGRRCQECRDGTFDLDSASLFGCKDCSCDVGGSWQSVCDKIS 801
Fly 802 GQCKCHPRITGLACTQPLTTHFFPTLHQFQYEYEDGSLPSGTQVRYDYDEAAFPGFSSKGYVVFN 866
Fly 867 AIQNDVRNEVNVFKSSLYRIVLRYVNPNAENVTATISVTSDNPLEVDQHVKVLLQPTSEPQFVTV 931
Fly 932 AGPLGVKPSAIVLDPGRYVFTTKANKNVMLDYFVLLPAAYYEAGILTRHISNPCELGNMELCRHY 996
Fly 997 KYASVEVFSPAATPFVIGENSKPTNPVETYTDPEHLQIVSHVGDIPVLSGSQNELHYIVDVPRSG 1061
Fly 1062 RYIFVIDYISDRNFPDSYYINLKLKDNPDSETSVLLYPCLYSTICRTSVNEDGMEKSFYINKEDL 1126
Fly 1127 QPVIISADIEDGSRFPIISVTAIPVDQWSIDYINPSPVCVIHDQQCATPKFRSVPDSKKIEFETD 1191
Fly 1192 HEDRIATNKPPYASLDERVKLVHLDSQNEATIVIESKVDATKPNLFVILVKYYQPSHPKYQVYYT 1256
Fly 1257 LTAGKNQYDGKFDIQHCPSSSGCRGVIRPAGEGSFEIDDEFKFTITTDRSQSVWLDYLVVVPLKQ 1321
Fly 1322 YNDDLLVEETFDQTKEFIQNCGHDHFHITHNASDFCKKSVFSLTADYNSGALPCNCDYAGSTSFE 1386
Fly 1387 CHPFGGQCQCKPNVIERTCGACRSRYYGFPD--CKPCKCPN-SAMCEPTTGECMCPPNVIGDLCE 1448
Fly 1449 KCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQNIEGRACDVCSNGYFNFPHCEQ 1513
Fly 1514 CSCHKPGTELEVCDK---------IDGACFCKKNVVGRDCDQCVDGTYNLQESNPDGCTTCFCFG 1569
Fly 1570 KTSRCDSAYLRVYNVSLLKHVSITTPEFHEESIKFDMWPVPADEILLNETTLKADFTLREV---N 1631
Fly 1632 DE-------RPAYFGVLDYLLNQNNHISAYGGDLAYTLHFTSGFD-GKYIVAPDVIL---FSEHN 1685
Fly 1686 ALVHTSYEQPSRNEPFTNRVNIVESNFQTISGKP-----VSRADFMMVLRDLKVIFIRANYWEQT 1745
Fly 1746 LVTHLSDVYLTLADEDADGTGEYQFLAVERCSCPPGYSGHSCEDCAPGYYRDPSGPYG------- 1803
Fly 1804 GYCIPCECNGHSETCDCATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICACPLPFDSN 1868
Fly 1869 NFATSCEISESGDQIHCECKPGYTGPRCESCANGFYGEPESIGQVCKPCECSGNINPEDQGSCDT 1933
Fly 1934 RTGECLRCLNNTFGAACNLCAPGFYGDAIKLKNCQSCDCDDLGTQTCDPFVGVCTCHENVIGDRC 1998
Fly 1999 DRCKPDHYGFESGVGCRACDCGAASNSTQCDPHTGHCACKSGVTGRQCDRCAVDHWKYEKDGCTP 2063
Fly 2064 CNCNQGYSRGFGCNPNTGKCQCLPGVIGDRCDACPNRWVLIKDEGCQECNNCHHALLDVTDRMRY 2128
Fly 2129 QIDSVLEDFNSVTLAFFTSQKLNY-YDQLADELEPKVKLLDPNSVDLSPSKKANSEL----ESDA 2188
Fly 2189 KSYAKQVNQTLANAFDI----------RERSSTTLGNI------TVAYDEAV-KSADQAKEAIAS 2236
Fly 2237 VEALSKNLEAAASTKIDAALEQ--AQHILGQINGTSIELTPNEQVLEKARKLYEEVNTLVLPIKA 2299
Fly 2300 QNKSLNA-LKNDIGEFSDHLEDLFNWSEASQAKSADVERRNVANQKAFD--NSKFDTVSEQKLQA 2361
Fly 2362 EKNIKDAGNFLINGDLTLNQINQKLDNLRDALNELNSFNKNVDEELPVREDQHKEADALTDQ-AE 2425
Fly 2426 QKAAELAIKAQDLAAQYTDMTASAE-----------PAIKAATAYSGIVEAVEAAQKLSQDAISA 2479
Fly 2480 AGNATDKTDGIEERAHLADTGSTDLLQRARQSLQ----------KVQDDLEPRLNASAGKVQKIS 2534
Fly 2535 AVNNATEHQLKDINKLIDQLPA---------ESQRDMWKNSNANASDALEILKNVLEILEPVSVQ 2590
Fly 2591 TPK---ELEKAHGINRDLDLTNKDVSQANKQLDDVEGSVSKLSELAEDIEEQQHRVGSQSRQLGQ 2652
Fly 2653 EIENLKAQVEAARQLANSIKVGVNFKPSTILELKTPEKTKLLATRTNLSTYFRTTEPSGFLLYLG 2717
Fly 2718 NDNKTAQKNNDFVAVEIVNGYPILTIDLGNGPERIT-SDKYVADGRWYQAVVDRMGPNAKLTIRE 2781
Fly 2782 -ELPNGDVV---EHSKS--GYLEGSQNILHVDKNSRLFVGGYPG-ISDFNAPPDLTTNSFSGDIE 2839
Fly 2840 DLKIGDESVGLWNFVYGDDNDQGARERDVLLEKKKPVTGLRFKGNGYVQLNATSNLKSR------ 2898
Fly 2899 --SSIQFSFKADKDTSNGLLFFYG-RD-KHYMSIEMIDGAIFFNISLGEGGGVQSGSQDRYNDNQ 2959
Fly 2960 WHKVQAERENRNGLLKVDDI------VISRTNAPLEADLELPKLRRLYFGGHPRRLNTSISLQP- 3017
Fly 3018 ----NFDGCIDNVVINQ---GVVDLTEYVTGGGVEEGCSAKFSTVVSYAPHEYGFLRMNNVSSDN 3075
Fly 3076 NLHVVLHFKTTQPNGVLFYAA-----------NHDQSSTIGLSLQDGLLKLN-SMGS----QLVI 3124
Fly 3125 --DDRILNDGEDHVVTVQHTQGELRLTVDDVDNKR----LGSPQPLILEGGDIFFAGLPDNYRTP 3183
Fly 3184 RNALASLAYFVGCISDVTVNEEIINFANSAEKKNGNINGCPPHVLAYEPSLVPSYYPSGDNEVES 3248
Fly 3249 PWSNADTLPPLKPDIESTLPPTTPTTTTTTTTTTTSTTTTSTTTTTTTPSPIVIDEEKEIEAKTP 3313
Fly 3314 QKILTTRPPAKLNLPSDERCKLPEQPNFDVDFTEAGYRFYGL-REQRLQINSLPVKVRRHHDIGI 3377
Fly 3378 SFRTERPNGLLIYAGSKQRDDFIAVYLLDGRVTYEIRVGA-QLQAKITTEAELNDGTWHTVEVVR 3441
Fly 3442 TQRKVSLLIDKLEQPGSVDLNAERSAPVLAVELPIYLGGVNKFLESEVKNLTDFKTEVPY-FNGC 3505
Fly 3506 LKNIKFD--AMDLETPPEEFGVVPCSEQVERGLFFNNQKAFVKIFDHFDVGTEMKISFDFRPRDP 3568
Fly 3569 NGLLFSVHGKNSYAI-LELVDNTLYFTVKTDLKNIVSTNYKLPNNESFCDGKTRNVQAIKSKFVI 3632
Fly 3633 NIAVDFISSNPGVGNEGSVITRTNRPLFLGGHVAFQRAPGIKTKKSFKGCISKVEVNQ 3690 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanA | NP_476617.1 | LamNT | 18..271 | CDD:214532 | 108/265 (41%) |
EGF_Lam | 272..>314 | CDD:238012 | 20/44 (45%) | ||
EGF_Lam | 332..389 | CDD:238012 | 33/56 (59%) | ||
EGF_Lam | 402..443 | CDD:238012 | 18/50 (36%) | ||
EGF_Lam | 448..491 | CDD:238012 | 14/43 (33%) | ||
Laminin_EGF | 495..543 | CDD:278482 | 16/240 (7%) | ||
Laminin_EGF | 541..589 | CDD:278482 | 23/54 (43%) | ||
Laminin_EGF | 587..634 | CDD:278482 | 7/46 (15%) | ||
EGF_Lam | 631..673 | CDD:238012 | 12/41 (29%) | ||
Laminin_EGF | 677..729 | CDD:278482 | 7/51 (14%) | ||
Laminin_EGF | 732..782 | CDD:278482 | 16/50 (32%) | ||
EGF_Lam | 785..828 | CDD:238012 | 13/42 (31%) | ||
CBM6-CBM35-CBM36_like | 831..966 | CDD:271143 | 0/134 (0%) | ||
Laminin_EGF | 1375..1423 | CDD:278482 | 20/49 (41%) | ||
EGF_Lam | 1420..1457 | CDD:238012 | 18/37 (49%) | ||
Laminin_EGF | 1466..1516 | CDD:278482 | 17/49 (35%) | ||
Laminin_EGF | 1514..1562 | CDD:278482 | 21/56 (38%) | ||
LamB | 1632..1760 | CDD:214597 | 32/143 (22%) | ||
Laminin_EGF | <1775..1801 | CDD:278482 | 19/25 (76%) | ||
EGF_Lam | 1808..1851 | CDD:238012 | 24/42 (57%) | ||
EGF_Lam | 1859..1907 | CDD:214543 | 22/47 (47%) | ||
EGF_Lam | 1916..1968 | CDD:238012 | 3/51 (6%) | ||
EGF_Lam | 1969..2015 | CDD:238012 | 3/45 (7%) | ||
EGF_Lam | 2016..>2054 | CDD:238012 | 15/37 (41%) | ||
EGF_Lam | 2063..>2097 | CDD:238012 | 4/33 (12%) | ||
Laminin_I | 2129..2385 | CDD:283627 | 56/282 (20%) | ||
Tar | 2278..2662 | CDD:223910 | 86/420 (20%) | ||
Laminin_II | 2566..2700 | CDD:283628 | 32/136 (24%) | ||
LamG | 2674..2843 | CDD:238058 | 52/176 (30%) | ||
LamG | 2878..3029 | CDD:238058 | 45/171 (26%) | ||
LamG | 3078..3205 | CDD:214598 | 34/148 (23%) | ||
LamG | 3349..3512 | CDD:238058 | 43/165 (26%) | ||
LamG | 3535..3689 | CDD:238058 | 43/154 (28%) | ||
Lama2 | XP_038954896.1 | Laminin_N | 39..284 | CDD:395009 | 106/258 (41%) |
EGF_Lam | 286..333 | CDD:238012 | 26/52 (50%) | ||
Laminin_EGF | 413..470 | CDD:395007 | 21/56 (38%) | ||
Laminin_EGF | 468..514 | CDD:395007 | 15/49 (31%) | ||
Laminin_B | 582..721 | CDD:395006 | 4/138 (3%) | ||
EGF_Lam | 755..804 | CDD:238012 | 20/51 (39%) | ||
EGF_Lam | 805..862 | CDD:238012 | 21/93 (23%) | ||
EGF_Lam | 863..915 | CDD:238012 | 23/102 (23%) | ||
EGF_Lam | 916..963 | CDD:238012 | 18/587 (3%) | ||
EGF_Lam | 966..1010 | CDD:214543 | 18/44 (41%) | ||
EGF_Lam | 1012..1057 | CDD:238012 | 21/44 (48%) | ||
Laminin_EGF | 1059..1107 | CDD:395007 | 17/49 (35%) | ||
Laminin_EGF | 1105..1162 | CDD:395007 | 21/56 (38%) | ||
LamB | 1228..1363 | CDD:214597 | 30/136 (22%) | ||
EGF_Lam | <1378..1406 | CDD:238012 | 20/27 (74%) | ||
Laminin_EGF | 1419..1465 | CDD:395007 | 25/46 (54%) | ||
Laminin_EGF | 1468..1523 | CDD:395007 | 25/54 (46%) | ||
EGF_Lam | 1526..>1563 | CDD:238012 | 21/135 (16%) | ||
Laminin_I | 1593..1851 | CDD:310534 | 56/283 (20%) | ||
SMC_prok_B | <1675..>2033 | CDD:274008 | 82/384 (21%) | ||
Laminin_II | 2036..2171 | CDD:368703 | 33/145 (23%) | ||
Laminin_G_1 | 2173..2313 | CDD:395008 | 45/152 (30%) | ||
Laminin_G_1 | 2367..2506 | CDD:395008 | 37/141 (26%) | ||
LamG | 2527..2689 | CDD:238058 | 40/169 (24%) | ||
Laminin_G_1 | 2792..2920 | CDD:395008 | 36/139 (26%) | ||
LamG | 2940..3092 | CDD:238058 | 43/153 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 87 | 1.000 | Domainoid score | I7820 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |