DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanA and Lama3

DIOPT Version :9

Sequence 1:NP_476617.1 Gene:LanA / 38723 FlyBaseID:FBgn0002526 Length:3712 Species:Drosophila melanogaster
Sequence 2:NP_001380677.1 Gene:Lama3 / 307582 RGDID:628776 Length:3333 Species:Rattus norvegicus


Alignment Length:3899 Identity:1159/3899 - (29%)
Similarity:1759/3899 - (45%) Gaps:785/3899 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLVILAISYC-----------QAELTPPYFNLATGRKIYATATCGQ-----DTDGPELYCKLVGA 59
            ||::|.:|.|           :..|.|||||||...||:||||||:     ....|||:|||||.
  Rat    19 LLLLLRMSPCWSVVAQDPPAARLSLHPPYFNLAQAAKIWATATCGERGLDVSRPRPELFCKLVGG 83

  Fly    60 NTE--HDHIDYSVIQGQVCDYCDPTVPERNHPPENAIDGTEAWWQSPPLSRGMKFNEVNLTINFE 122
            .|.  ..|    .||||.||||:.....:.||..:||||:|.||||||||.|.::|:||||::..
  Rat    84 PTAPGSGH----TIQGQFCDYCNSEDSRKAHPAIHAIDGSERWWQSPPLSSGTQYNKVNLTLDLG 144

  Fly   123 QEFHVAYLFIRMGNSPRPGLWTLEKSTDYGKTWTPWQHFSDTPADCETYFGKDTYKPITRDDDVI 187
            |.|||||:.|:..|||||.||.||:|.|:|.|::|||:|:.:..||...||::....:||||.|:
  Rat   145 QLFHVAYILIKFANSPRPDLWVLERSVDFGNTYSPWQYFAHSRGDCLQQFGQEANMAVTRDDQVL 209

  Fly   188 CTTEYSKIVPLENGEIPVMLLNERPSSTNYFNSTVLQEWTRATNVRIRLLRTKNLLGHLMSVARQ 252
            |.||||:|||||||||.|.|:|.||.:.::..|..|:|:|:|||:|:|.|||..|||||:|.|.:
  Rat   210 CVTEYSRIVPLENGEIVVSLINGRPGAKHFAFSDTLREFTKATNIRLRFLRTNTLLGHLISKAER 274

  Fly   253 DPTVTRRYFYSIKDISIGGRCMCNGHADTCDVKDPKSPVRILACRCQHHTCGIQCNECCPGFEQK 317
            ||||||||:|||||||:||||:|||||:.|...:|:...|   |:|||||||..||.||.|:.|:
  Rat   275 DPTVTRRYYYSIKDISVGGRCVCNGHAEACSADNPEKQFR---CKCQHHTCGDTCNRCCAGYNQR 336

  Fly   318 KWRQNTNARPFNCEPCNCHGHSNECKYDEEVNRKGLSLDIHGHYDGGGVCQNCQHNTVGINCNKC 382
            .||.....:...||.||||||:.:|.|||.|:|:..||:..|.|.|||||.:|||||.|:||.||
  Rat   337 PWRPAAQDQHNECEACNCHGHAVDCYYDEAVSRQQASLNSKGVYTGGGVCIDCQHNTAGVNCEKC 401

  Fly   383 KPKYYRPKGKHWNETDVCSPCQCDYFFSTGHCEEETGNCECRAAFQPPSCDSCAYGYYGYPNCRE 447
            ...|:||.|........|.||.||                      |...|.|..|         
  Rat   402 AKGYFRPHGVPVEALHGCIPCSCD----------------------PDRADECDQG--------- 435

  Fly   448 CECNLNGTNGYHCEAESGQQCPCKINFAGAYCKQCAEGYYGFPECKACECNKIGSITNDCNVTTG 512
                            || :|.||.||:|.:|:.||:|||.||.|...      .:..|..:.. 
  Rat   436 ----------------SG-RCHCKPNFSGDFCETCADGYYNFPFCLRI------PVFPDYTLNP- 476

  Fly   513 ECKCLTNFGGDNCERCKHGYFNYPTCSYCDCDNQGTESEICNKQSGQCICREGFGGPRCDQCLPG 577
            |.....|..|                  |||:.:|...|||:.: |:|:||.|..|||||.|..|
  Rat   477 EDPMAGNIKG------------------CDCNLEGVLPEICDDR-GRCLCRPGVEGPRCDSCRSG 522

  Fly   578 FYNYPDCKPCNCSSTGSSAITCD-NTGKCNCLNNFAGKQCTLCTAGYYSYPDCLPCHCDSHGSQG 641
            .|::|.|:.|.||::||..:.|| .||:|.||                                 
  Rat   523 SYSFPICQACQCSTSGSYPVPCDPETGQCECL--------------------------------- 554

  Fly   642 VSCNSDGQCLCQPNFDGRQCDSCKEGFYNFPSCEDCN--CDPAGVIDKFAGCGSVPVGELCKCKE 704
                        |...||:||.|..|.|:||.|:..:  |||||.:|...|        .|:||.
  Rat   555 ------------PGVTGRRCDRCLSGAYDFPYCQGSSSVCDPAGTMDSSLG--------YCQCKL 599

  Fly   705 RVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRD 769
            .||...|:.||||||:|...|..||..|.|...||:|.:..|..:.|.|.||.|..|..|..|.|
  Rat   600 HVTSPTCSVCKPLYWDLAKENPRGCSECQCHEAGTVSGIGECGQEDGDCSCKAHVTGDACDTCAD 664

  Fly   770 GTFDLDSASLFGCKDCSCDVGGSWQSVCDKISGQCKCHPRITGLACTQPLTTHFFPTLHQFQYEY 834
            |.|.|:.::.|||:.|.||:||:..::|...||:|:|...|.|..|.:|.:..:||.||..:||.
  Rat   665 GYFSLEKSNYFGCQGCQCDIGGALTTMCSGPSGECQCREHIEGKQCQRPESNCYFPDLHHMKYEV 729

  Fly   835 EDGSLPSGTQVRYDYDEAAFPGFSSKGYVVFNAIQNDVRNEVNVFKS--SLYRIVLRYVNPNAEN 897
            |.|:.|:|..:|:.:|...||.||.:|||...::||:|:..:.|.||  ||:||:|||:||..|.
  Rat   730 EGGTGPNGRDLRFGFDPLEFPEFSWRGYVPMTSVQNEVKVRLTVRKSSLSLFRIILRYINPGMEE 794

  Fly   898 VTATISV-TSDNPLEVDQHVKVLLQPTSEPQFVTVAGPLGVKPSAIVLDPGRYVFTTKANKNVML 961
            |:..|:| :|....:..|..::...|:.||.||||.|.....|.:|.  ||.::...:. :.|:|
  Rat   795 VSGRITVYSSRGKSDASQSKEITFPPSKEPAFVTVPGNGFADPFSIT--PGTWIACIQV-EGVLL 856

  Fly   962 DYFVLLPAAYYEAGILTRHISNPC-ELGN-MELCRHYKYASVEVFSPA----ATPFVIGENSKP- 1019
            ||.||||..||||..|...::.|| ..|: .:.|..|::..:..||..    ||.|:|....:| 
  Rat   857 DYLVLLPRDYYEAFALQVPVTEPCAHTGSPQDNCLLYQHLPLTRFSCTLACEATHFLIDGERRPL 921

  Fly  1020 --TNPVETYTDPEHLQIVSHVGDIPVLSGSQNELHYIVDVPRSGRYIFVIDYISDRNFPDSYYIN 1082
              ..|:     |.|..:|.       |||::.|||..:.||:.|.|:.:::|.::  ....:.::
  Rat   922 AVRQPM-----PTHPAMVD-------LSGTEVELHLRLRVPQIGHYVVMLEYATE--VDQLFVVD 972

  Fly  1083 LKLKDNPDSETS--VLLYPCLYSTICRTSVNEDGMEKSFYINKEDLQPVIISADIE---DGSRFP 1142
            :.|| :|:|..:  |.:|.|.||.:||:.|.:.       :::..:..::..||::   ..:||.
  Rat   973 VNLK-SPESALAGQVNIYSCKYSILCRSVVIDS-------LSRTAVYELLADADVQLKVHAARFL 1029

  Fly  1143 IISVTAIPVDQWSIDYINPSPVCVIHDQQCATPKFRSVPDSKKIEFETDHEDRIATNKPPYASLD 1207
            :..:..||.:::|.:|:.|...|:....|.|.|....|        ...||      .||.|.:.
  Rat  1030 LHHICVIPAEEFSTEYLRPQVHCIASYGQSANPSASCV--------SVTHE------TPPTALIL 1080

  Fly  1208 ERVK------LVHLDS--------------QNEATIVIESKVDATKPNL--FVILVKYYQPSHPK 1250
            :...      |.|..|              ||:.|:      ....|:|  .|.:|.:||..||.
  Rat  1081 DATSGGHFSPLPHEPSSPADVTNGVTLKAPQNQVTL------RGLIPHLGRHVFVVHFYQAEHPG 1139

  Fly  1251 YQVYYTLTAGKNQYDGKFDIQHCPSSSGCRGVIRPAGEGSFEIDD-EFKFTITTDRSQSVWLDYL 1314
            :.....:..|: ::.|.|....||...||:..:...|:..|:|.: :...|:.....:|:.|..:
  Rat  1140 FPTEVVVDGGR-RWSGSFRASFCPHLLGCQDQVISEGQVEFDISEADVAVTVKIPDGKSLTLVRV 1203

  Fly  1315 VVVPLKQYNDDLLVEETFDQTKEFIQNCGHDHFHI-THNASDFCKKSVFSLTADYNSGALPCNCD 1378
            :|||.:.|:..:|...:.|::.|||.:||.|.|:| ...||.|||.|..||.|.|::||:||.|.
  Rat  1204 LVVPAEDYDYHILHRTSVDKSSEFISSCGGDSFYIDPQAASGFCKNSARSLVAFYHNGAVPCECH 1268

  Fly  1379 YAGSTSFECHPFGGQCQCKPNVIERTCGACRSRYYGFPDCKPCKCPNSAMCEPTTGECMCPPNVI 1443
            .||:....|.|.||||.|:||||.|.|..|.:.|||||.||||.| ...:||..||:|:||||.:
  Rat  1269 PAGAAVHHCSPEGGQCPCRPNVIGRQCTRCATGYYGFPHCKPCNC-GRRLCEEVTGKCLCPPNTV 1332

  Fly  1444 GDLCEKCAPNTYGFHQVIGCEECACNPMG-IANGNSQCDLFNGTCECRQNIEGRACDVCSNGYFN 1507
            ...||.|..|::.||.|.|||.|.|:..| :....|:||..:|.|.|:..:.|:.||.|:.|:::
  Rat  1333 RPQCEVCEMNSFNFHPVAGCEVCNCSRKGTVEAAVSECDRDSGQCRCKPRVTGQQCDKCAPGFYH 1397

  Fly  1508 FPHCEQCSCHKPGTELEVCDKIDGACFCKKNVVGRDCDQCVDGTYNLQESNPDGCTTCFCFGKTS 1572
            ||.|..|||::.|||..|||...|||.||:||.|..|..|.:|::.|..:||:|||.|||||..:
  Rat  1398 FPECVPCSCNRDGTEPGVCDPGTGACMCKENVEGPQCQFCREGSFYLDSANPEGCTRCFCFGVNT 1462

  Fly  1573 RCDSAYLRVYNVSLLKHVSITTPEFHEESIKF-DM--WPVPADE-----ILLNETTLKADFTLRE 1629
            .|.|:                    |:...|| ||  |.:...:     :..|.::......|:|
  Rat  1463 DCRSS--------------------HKRRAKFVDMMGWRLETADGVDVPVSFNPSSNSVVADLQE 1507

  Fly  1630 VNDE--------RPAYFGVLDYLLNQNNHISAYGGDLAYTLHFTSGFDGKYIV---APDVILFSE 1683
            :...        .|:|.|         :.:|:|||.|.|... :.|..|..::   .|||.|..:
  Rat  1508 LPSSVHSASWVAPPSYLG---------DKVSSYGGYLTYQAK-SFGLPGDMVLLEKQPDVQLIGQ 1562

  Fly  1684 HNALVHTSYEQPSRNEPFTNRVNIVESNFQTI-SGKPVSRADFMMVLRDLKVIFIRANYWEQTLV 1747
            |.:::|.....|..:.|...||.:||.||:.. :..||||.:.|.||..|:.:.||..::.:|..
  Rat  1563 HMSIIHAEPSDPRPDRPHHGRVQVVEGNFRHAGNSAPVSREELMAVLSSLEGLHIRGLHFTETQR 1627

  Fly  1748 THLSDVYLTLADEDADGTGEYQFLAVERCSCPPGYSGHSCEDCAPGYYRDPSGPYGGYCIPCECN 1812
            ..|.:|.|..|.:...|...:   .||.|:|||.|:|.||:.|.||||||......|.|:||.||
  Rat  1628 LTLGEVGLEEASDTGSGPRAH---LVEMCTCPPDYTGDSCQGCRPGYYRDIKSFPAGRCVPCNCN 1689

  Fly  1813 GHSETCDCATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICACPLPFDSNNFATSCEIS 1877
            |||..|...:|:|..|||.|.|:|||||..||||:|.:|:   |.:|.||   .:|:|||.|.: 
  Rat  1690 GHSNRCQDGSGVCINCQHNTAGEHCERCQEGYYGSAIHGS---CRVCPCP---HTNSFATGCAV- 1747

  Fly  1878 ESGDQIHCECKPGYTGPRCESCANGFYGEPESIGQVCKPCECSGNINPEDQGSCDTRTGECLRCL 1942
             .|..:.|.|||||||.:||.||.|::|.|:..|..|:||.|:.|                    
  Rat  1748 -DGGAVRCACKPGYTGAQCERCAPGYFGNPQKFGGSCQPCNCNSN-------------------- 1791

  Fly  1943 NNTFGAACNLCAPGFYGDAIKLKNCQSCDCDDLGTQTCDPFVGVCTCHENVIGDRCDRCKPDHYG 2007
                         |.:|                   ||||..|.|...|                
  Rat  1792 -------------GQFG-------------------TCDPLTGDCVSQE---------------- 1808

  Fly  2008 FESGVGCRACDCGAASNSTQCDPHTGHCACKSGVTGRQCDRCAVDHWKYEKDGCTPCNCNQGYSR 2072
                                                             .||| :|.        
  Rat  1809 -------------------------------------------------PKDG-SPA-------- 1815

  Fly  2073 GFGCNPNTGKCQCLPGVIGDRCDACPNRWVLIKDEGCQECNNCHHALLDVTDRMRYQIDSVLEDF 2137
                                              |.|.:|::|...||:....|..::..|....
  Rat  1816 ----------------------------------EECDDCDSCVMTLLNDLVSMGEELRLVKSRL 1846

  Fly  2138 NSVTLAFFTSQKLNYYDQLADELEPKVKLLDPNSVDLSPSKKANSELESDAKSYAKQVNQTLANA 2202
            ..::::....:::.:.:..|.:|  :.:||...|...|...|.:. ||.:. |:..|..:||...
  Rat  1847 QGLSVSTGALEQIRHVEMQAKDL--RNQLLGFRSAISSHGSKMDG-LEKEL-SHLNQEFETLQEK 1907

  Fly  2203 FDIRERSSTTLGNITVAYDEAVKSADQ----AKEAIASVEALSKNLEAAASTKID-------AAL 2256
            ..:..|.:.||.|   ..|:.:::|.:    .|..|.:|..|.|.:.......:|       ..|
  Rat  1908 AQVNSRKAQTLYN---NIDQTIQNAKELDMKIKNIIQNVHILLKQIARPGGEGMDLPVGDWSREL 1969

  Fly  2257 EQAQHILGQINGTSIELTPNEQVLEK--ARKLYEEVNTLVLPIKAQNKSLNALKN---DIGEFSD 2316
            .:||.:|.::.|...:....|...:|  |:.|...:.|.:...:.:|..|  |||   .:.::..
  Rat  1970 AEAQRMLRELRGRDFKKHLQEAEAQKMEAQLLLNRIRTWLESHQVENNGL--LKNIRDSLNDYEA 2032

  Fly  2317 HLEDLFNWSEASQAKSADVERRNVANQKAFDNSKFDTVSEQKLQAEKNIKDAGNFLINGDLTLNQ 2381
            .|:||.:..:.:.|:.......|..|:     .....:..|..:.:....|....|...|.:|.|
  Rat  2033 KLQDLRSVLQEAAAQGKQATGLNHENE-----GVLGAIQRQMKEMDSLKNDLTEHLATADASLLQ 2092

  Fly  2382 INQKLDNLRDALNE-------LNSFNKNVDEELPVREDQHKEADA-LTDQAEQKAAELAIKAQDL 2438
            .|..|..:..:..|       ||...:.::::  |||.......| |..:||:.|..|    |:|
  Rat  2093 TNSLLQRMDTSQKEYESLAAALNGARQELNDQ--VRELSRSGGKAPLVAEAEKHAQSL----QEL 2151

  Fly  2439 AAQYTDMTASAEP------AIKAATAYSGIVEAVEAAQKLSQDAISAAGNA--TDKTDGIEERAH 2495
            |.|..::..:...      |:.|||||..|:.|:.||:..:..|.||:.:|  |...:.:..||.
  Rat  2152 AKQLEEIKRNTSGDELVRCAVDAATAYESILNAIRAAEDAAGKAASASESAFQTVIKEDLPRRAK 2216

  Fly  2496 LADTGSTDLLQRARQSLQKVQDDLEPRLNA-----SAGKVQK------ISAVNNATEH-QLKDIN 2548
            ...:.|.:||..|:.:.:::|.::.|.||:     ....|||      ::||.|.... |..||:
  Rat  2217 TLSSDSEELLNEAKMTRKRLQQEINPALNSLQQTLKTVSVQKDLLDANVTAVRNDLRGIQRGDID 2281

  Fly  2549 KLIDQLPAESQRDMWKNSNANASDALEILKNVLEILEPVSVQTPKELEKAHGINRDLDLTNKDVS 2613
            .::     ...:.|.:.:|.       |...||:.|.|:.....: ::.::|..|..|.      
  Rat  2282 SVV-----SGAKSMVRKANG-------ITSEVLDGLSPIQTDLGR-IKDSYGSTRHEDF------ 2327

  Fly  2614 QANKQLDDVEGSVSKLSELAEDIEEQQHRVGSQSRQLG---QEIENLKAQVEAARQLANSIKVGV 2675
              ||.|.|...||.||::...|:..:...:..|...||   ..::.::..::.||..||.:.:.:
  Rat  2328 --NKALIDANNSVKKLTKKLPDLFVKIESINQQLLPLGNISDNVDRIRELIQQARDAANKVAIPM 2390

  Fly  2676 NFKPSTILELKTPEKTKLLATRTNLSTYFR---TTEPSG----FLLYLGNDNKTAQKNNDFVAVE 2733
            .|...:.:|::.|...:.|...|:||.:.:   ..|..|    |::|||  ||.|.|  |::.:.
  Rat  2391 RFNGKSGVEVRLPNDLEDLKGYTSLSLFLQRPDLRENGGTEDMFVMYLG--NKDASK--DYIGMA 2451

  Fly  2734 IVNGYPILTIDLGNGPERITSDKYVADGRWYQAVVDRMG-----PNAKLTIREEL----PNGDVV 2789
            :|:|......:||:....:..|:.:.:....:||:||:.     ..|||...:|.    |....|
  Rat  2452 VVDGQLTCVYNLGDREAEVQIDQVLTESESQEAVMDRVKFQRIYQFAKLNYTKEATSNKPKAPAV 2516

  Fly  2790 EHSKSGYLEGSQNILHVDKNSRLF-VGGYPGISDFNAPPDLTTNSFSGDIEDLKIGDESVGLWNF 2853
            ...:.|   .|..:|::|....:| |||||  .||..|..|....:.|.||...:.:..:.|:||
  Rat  2517 YDLEGG---SSNTLLNLDPEDAVFYVGGYP--PDFELPSRLRFPPYKGCIELDDLNENVLSLYNF 2576

  Fly  2854 VYGDDNDQGARERDVLLEKKKPVTGLRFKGNGYVQLNATSNLKSRSSIQFSFKADKDTSNGLLFF 2918
              ....:....|.:....:|:......|:|.||.::....|....:.||   ........|||||
  Rat  2577 --KTTFNLNTTEVEPCRRRKEESDKNYFEGTGYARIPTQPNAPFPNFIQ---TIQTTVDRGLLFF 2636

  Fly  2919 YGRDKHYMSIEMIDGAIFFNISLGEGGGVQSGSQDRYNDNQWHKVQAERENRNGLLKVDD----- 2978
            .....:::|:.:.||.:.....|......:.|.:|..||.:.|.:         |:.:..     
  Rat  2637 AENQDNFISLNIEDGNLMVRYKLNSEPPKEKGIRDTINDGKDHSI---------LITIGKLQKRM 2692

  Fly  2979 -IVISRTNAPLEADLELPKLRRLYFGGHP----RRLNTSISLQPNFDGCIDNVVINQGVVDLTEY 3038
             |.::..:..:|.  |:......|.||.|    .|.|.|   .|.|.||:.|:....|||.|.:.
  Rat  2693 WINVNERSVRIEG--EIFDFSTYYLGGIPIAIRERFNIS---TPAFQGCMKNLKKTSGVVRLNDT 2752

  Fly  3039 VTGGGVEEGCSAKFSTVVSYAPHEYGFLRMNN--VSSDNNLHVVLHFKTTQPNGVLFYAANHD-Q 3100
            |   ||.:.||..:..|.:.:....|.:...|  |.|.:...:...|:|.||:|.|.   ||. :
  Rat  2753 V---GVTKKCSEDWKLVRTASFSRGGQMSFTNLDVPSTDRFQLSFGFQTFQPSGTLL---NHQTR 2811

  Fly  3101 SSTIGLSLQDGLLKLNSMGSQLVI-------DDRILNDGEDHVVTVQHTQGELRLTVDDV---DN 3155
            :|::.::|:||.::|::..|.:.|       .|.:|:    ||..:..|.| |||.:||.   .|
  Rat  2812 TSSLLVTLEDGHIELSTRDSNIPIFKSPGTYMDGLLH----HVSVISDTSG-LRLLIDDQVLRRN 2871

  Fly  3156 KRLGS----PQPLILEGGDIFFAGLPDNYRTPRNALASLAYFVGCISDVTV-----NEEIINFAN 3211
            :||.|    .|.|.|.||                      :|.||||:|.|     :.|:::.|:
  Rat  2872 QRLPSFSNAQQSLRLGGG----------------------HFEGCISNVLVQRFSQSPEVLDLAS 2914

  Fly  3212 SAEKKNGNINGC----PPHVLAYEPSLVPSYYPSGD----NEVESPWSNADTLPPLKPDIESTLP 3268
            .:.||:.::.||    ||.::.::.   |..:..|.    |::......|........|..|.||
  Rat  2915 KSTKKDASLGGCSLNKPPFLMLFKS---PKRFNKGRIFNVNQLMQDAPQATRSTEAWQDGRSCLP 2976

  Fly  3269 PTTPTTTTTTTTTTTSTTTTSTTTTTTTPSPIVIDEEKEIEAKTPQKILTTRPPAKLNLPSDERC 3333
            |.              .|..|........||     ...:..|.||::|..|....|::      
  Rat  2977 PL--------------NTKASHRALQFGDSP-----TSHLLFKLPQELLKPRSQFSLDI------ 3016

  Fly  3334 KLPEQPNFDVDFTEAGYRFYGLREQRLQINSLPVKVRRHHDIGISFRTERPNGLLIYAGSKQRDD 3398
                                                          :|..|.||:.|.|:|  |.
  Rat  3017 ----------------------------------------------QTTSPKGLVFYTGTK--DS 3033

  Fly  3399 FIAVYLLDGRVTYEIRVGAQLQAKITTEAELNDGTWHTVEVVRTQRKVSLLIDKLE-QPGSVDLN 3462
            |:|:|:.||||.:.:..|.: :.::.::...:||.||||.......|..|::|.|. |.||:..|
  Rat  3034 FLALYVADGRVVFALGAGGK-KLRLRSKERYHDGKWHTVVFGLNGGKARLVVDGLRAQEGSLPGN 3097

  Fly  3463 AERSAPVLAVELPIYLGGVNKFLESEVKNLTDFKTEVPYFNGCLKNIKFDAMDLETPPEEFGVVP 3527
            :     .::....:|||   ..|..:.|:|....     |.|||::.:.::..|::|...|||.|
  Rat  3098 S-----TISPREQVYLG---LPLSRKPKSLPQHS-----FVGCLRDFQLNSKPLDSPSARFGVSP 3149

  Fly  3528 C-SEQVERGLFFNNQKAFVKIFDHFDVGTEMKISFDFRPRDPNGLLFSVHGKNSYAILELVD-NT 3590
            | ...:|:|::|:.....|.:.:...:|.|:|::|..|||...|:|..|..::...:...:: ..
  Rat  3150 CLGGSLEKGIYFSQGGGHVILANSVSLGPELKLTFSIRPRSLTGVLIHVGSQSGQRLSVYMEAGK 3214

  Fly  3591 LYFTVKTDLKNIVSTNYKLPNNESFCDGKTRNVQAIKSKFVINIAVDFISS--------NPGVGN 3647
            :..:|.:|....|::   :...:|.|||:..:|.....:.::::.:|..||        :|    
  Rat  3215 VTTSVSSDAGGSVTS---ITPKQSLCDGQWHSVAVSIKQRILHLELDTDSSYTVAPLSFSP---- 3272

  Fly  3648 EGSVITRTNRPLFLGGHVAFQRAPGIKTKKSFKGCISKVEVNQRMINIT-PNMVVGDIWQGYCP 3710
                 ..|...|.:||.....:...:....||.||:..::||...:.|| ...|.|.:....||
  Rat  3273 -----NSTRGSLHVGGVPDKLKMLTLPVWNSFFGCLKNIQVNHVPVPITEATEVQGSVSLNGCP 3331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanANP_476617.1 LamNT 18..271 CDD:214532 143/270 (53%)
EGF_Lam 272..>314 CDD:238012 22/41 (54%)
EGF_Lam 332..389 CDD:238012 32/56 (57%)
EGF_Lam 402..443 CDD:238012 8/40 (20%)
EGF_Lam 448..491 CDD:238012 15/42 (36%)
Laminin_EGF 495..543 CDD:278482 5/47 (11%)
Laminin_EGF 541..589 CDD:278482 23/47 (49%)
Laminin_EGF 587..634 CDD:278482 12/47 (26%)
EGF_Lam 631..673 CDD:238012 9/41 (22%)
Laminin_EGF 677..729 CDD:278482 21/53 (40%)
Laminin_EGF 732..782 CDD:278482 19/49 (39%)
EGF_Lam 785..828 CDD:238012 16/42 (38%)
CBM6-CBM35-CBM36_like 831..966 CDD:271143 52/137 (38%)
Laminin_EGF 1375..1423 CDD:278482 27/47 (57%)
EGF_Lam 1420..1457 CDD:238012 16/36 (44%)
Laminin_EGF 1466..1516 CDD:278482 18/50 (36%)
Laminin_EGF 1514..1562 CDD:278482 23/47 (49%)
LamB 1632..1760 CDD:214597 40/139 (29%)
Laminin_EGF <1775..1801 CDD:278482 15/25 (60%)
EGF_Lam 1808..1851 CDD:238012 25/42 (60%)
EGF_Lam 1859..1907 CDD:214543 23/47 (49%)
EGF_Lam 1916..1968 CDD:238012 6/51 (12%)
EGF_Lam 1969..2015 CDD:238012 7/45 (16%)
EGF_Lam 2016..>2054 CDD:238012 0/37 (0%)
EGF_Lam 2063..>2097 CDD:238012 1/33 (3%)
Laminin_I 2129..2385 CDD:283627 54/271 (20%)
Tar 2278..2662 CDD:223910 95/419 (23%)
Laminin_II 2566..2700 CDD:283628 30/136 (22%)
LamG 2674..2843 CDD:238058 50/185 (27%)
LamG 2878..3029 CDD:238058 37/160 (23%)
LamG 3078..3205 CDD:214598 42/146 (29%)
LamG 3349..3512 CDD:238058 40/163 (25%)
LamG 3535..3689 CDD:238058 33/162 (20%)
Lama3NP_001380677.1 LamNT 42..293 CDD:214532 141/254 (56%)
EGF_Lam 294..340 CDD:238012 25/48 (52%)
EGF_Lam 351..419 CDD:238012 35/67 (52%)
EGF_Lam 421..461 CDD:238012 22/87 (25%)
Laminin_EGF 487..534 CDD:395007 23/47 (49%)
EGF_Lam 531..573 CDD:238012 20/86 (23%)
Laminin_EGF 627..677 CDD:395007 19/49 (39%)
EGF_Lam 680..723 CDD:238012 16/42 (38%)
Laminin_EGF 1265..1313 CDD:395007 27/47 (57%)
EGF_Lam 1310..1353 CDD:238012 20/43 (47%)
EGF_Lam 1355..1400 CDD:238012 15/44 (34%)
EGF_Lam 1403..1453 CDD:238012 24/49 (49%)
Laminin_B 1517..1651 CDD:395006 41/146 (28%)
EGF_Lam 1685..1731 CDD:238012 26/48 (54%)
EGF_Lam 1733..1784 CDD:238012 25/55 (45%)
Laminin_I 1846..2103 CDD:310534 54/270 (20%)
SMC_prok_B 2031..>2387 CDD:274008 90/387 (23%)
Laminin_II 2287..2415 CDD:368703 31/143 (22%)
LamG 2434..2569 CDD:214598 41/143 (29%)
LamG 2601..2741 CDD:238058 37/156 (24%)
LamG 2768..2900 CDD:238058 45/161 (28%)
LamG 2992..3134 CDD:238058 48/214 (22%)
LamG 3158..3309 CDD:238058 33/162 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 60 1.000 Domainoid score I10319
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1919at33208
OrthoFinder 1 1.000 - - FOG0003375
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3259
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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