Sequence 1: | NP_476617.1 | Gene: | LanA / 38723 | FlyBaseID: | FBgn0002526 | Length: | 3712 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001380677.1 | Gene: | Lama3 / 307582 | RGDID: | 628776 | Length: | 3333 | Species: | Rattus norvegicus |
Alignment Length: | 3899 | Identity: | 1159/3899 - (29%) |
---|---|---|---|
Similarity: | 1759/3899 - (45%) | Gaps: | 785/3899 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 LLVILAISYC-----------QAELTPPYFNLATGRKIYATATCGQ-----DTDGPELYCKLVGA 59
Fly 60 NTE--HDHIDYSVIQGQVCDYCDPTVPERNHPPENAIDGTEAWWQSPPLSRGMKFNEVNLTINFE 122
Fly 123 QEFHVAYLFIRMGNSPRPGLWTLEKSTDYGKTWTPWQHFSDTPADCETYFGKDTYKPITRDDDVI 187
Fly 188 CTTEYSKIVPLENGEIPVMLLNERPSSTNYFNSTVLQEWTRATNVRIRLLRTKNLLGHLMSVARQ 252
Fly 253 DPTVTRRYFYSIKDISIGGRCMCNGHADTCDVKDPKSPVRILACRCQHHTCGIQCNECCPGFEQK 317
Fly 318 KWRQNTNARPFNCEPCNCHGHSNECKYDEEVNRKGLSLDIHGHYDGGGVCQNCQHNTVGINCNKC 382
Fly 383 KPKYYRPKGKHWNETDVCSPCQCDYFFSTGHCEEETGNCECRAAFQPPSCDSCAYGYYGYPNCRE 447
Fly 448 CECNLNGTNGYHCEAESGQQCPCKINFAGAYCKQCAEGYYGFPECKACECNKIGSITNDCNVTTG 512
Fly 513 ECKCLTNFGGDNCERCKHGYFNYPTCSYCDCDNQGTESEICNKQSGQCICREGFGGPRCDQCLPG 577
Fly 578 FYNYPDCKPCNCSSTGSSAITCD-NTGKCNCLNNFAGKQCTLCTAGYYSYPDCLPCHCDSHGSQG 641
Fly 642 VSCNSDGQCLCQPNFDGRQCDSCKEGFYNFPSCEDCN--CDPAGVIDKFAGCGSVPVGELCKCKE 704
Fly 705 RVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRD 769
Fly 770 GTFDLDSASLFGCKDCSCDVGGSWQSVCDKISGQCKCHPRITGLACTQPLTTHFFPTLHQFQYEY 834
Fly 835 EDGSLPSGTQVRYDYDEAAFPGFSSKGYVVFNAIQNDVRNEVNVFKS--SLYRIVLRYVNPNAEN 897
Fly 898 VTATISV-TSDNPLEVDQHVKVLLQPTSEPQFVTVAGPLGVKPSAIVLDPGRYVFTTKANKNVML 961
Fly 962 DYFVLLPAAYYEAGILTRHISNPC-ELGN-MELCRHYKYASVEVFSPA----ATPFVIGENSKP- 1019
Fly 1020 --TNPVETYTDPEHLQIVSHVGDIPVLSGSQNELHYIVDVPRSGRYIFVIDYISDRNFPDSYYIN 1082
Fly 1083 LKLKDNPDSETS--VLLYPCLYSTICRTSVNEDGMEKSFYINKEDLQPVIISADIE---DGSRFP 1142
Fly 1143 IISVTAIPVDQWSIDYINPSPVCVIHDQQCATPKFRSVPDSKKIEFETDHEDRIATNKPPYASLD 1207
Fly 1208 ERVK------LVHLDS--------------QNEATIVIESKVDATKPNL--FVILVKYYQPSHPK 1250
Fly 1251 YQVYYTLTAGKNQYDGKFDIQHCPSSSGCRGVIRPAGEGSFEIDD-EFKFTITTDRSQSVWLDYL 1314
Fly 1315 VVVPLKQYNDDLLVEETFDQTKEFIQNCGHDHFHI-THNASDFCKKSVFSLTADYNSGALPCNCD 1378
Fly 1379 YAGSTSFECHPFGGQCQCKPNVIERTCGACRSRYYGFPDCKPCKCPNSAMCEPTTGECMCPPNVI 1443
Fly 1444 GDLCEKCAPNTYGFHQVIGCEECACNPMG-IANGNSQCDLFNGTCECRQNIEGRACDVCSNGYFN 1507
Fly 1508 FPHCEQCSCHKPGTELEVCDKIDGACFCKKNVVGRDCDQCVDGTYNLQESNPDGCTTCFCFGKTS 1572
Fly 1573 RCDSAYLRVYNVSLLKHVSITTPEFHEESIKF-DM--WPVPADE-----ILLNETTLKADFTLRE 1629
Fly 1630 VNDE--------RPAYFGVLDYLLNQNNHISAYGGDLAYTLHFTSGFDGKYIV---APDVILFSE 1683
Fly 1684 HNALVHTSYEQPSRNEPFTNRVNIVESNFQTI-SGKPVSRADFMMVLRDLKVIFIRANYWEQTLV 1747
Fly 1748 THLSDVYLTLADEDADGTGEYQFLAVERCSCPPGYSGHSCEDCAPGYYRDPSGPYGGYCIPCECN 1812
Fly 1813 GHSETCDCATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICACPLPFDSNNFATSCEIS 1877
Fly 1878 ESGDQIHCECKPGYTGPRCESCANGFYGEPESIGQVCKPCECSGNINPEDQGSCDTRTGECLRCL 1942
Fly 1943 NNTFGAACNLCAPGFYGDAIKLKNCQSCDCDDLGTQTCDPFVGVCTCHENVIGDRCDRCKPDHYG 2007
Fly 2008 FESGVGCRACDCGAASNSTQCDPHTGHCACKSGVTGRQCDRCAVDHWKYEKDGCTPCNCNQGYSR 2072
Fly 2073 GFGCNPNTGKCQCLPGVIGDRCDACPNRWVLIKDEGCQECNNCHHALLDVTDRMRYQIDSVLEDF 2137
Fly 2138 NSVTLAFFTSQKLNYYDQLADELEPKVKLLDPNSVDLSPSKKANSELESDAKSYAKQVNQTLANA 2202
Fly 2203 FDIRERSSTTLGNITVAYDEAVKSADQ----AKEAIASVEALSKNLEAAASTKID-------AAL 2256
Fly 2257 EQAQHILGQINGTSIELTPNEQVLEK--ARKLYEEVNTLVLPIKAQNKSLNALKN---DIGEFSD 2316
Fly 2317 HLEDLFNWSEASQAKSADVERRNVANQKAFDNSKFDTVSEQKLQAEKNIKDAGNFLINGDLTLNQ 2381
Fly 2382 INQKLDNLRDALNE-------LNSFNKNVDEELPVREDQHKEADA-LTDQAEQKAAELAIKAQDL 2438
Fly 2439 AAQYTDMTASAEP------AIKAATAYSGIVEAVEAAQKLSQDAISAAGNA--TDKTDGIEERAH 2495
Fly 2496 LADTGSTDLLQRARQSLQKVQDDLEPRLNA-----SAGKVQK------ISAVNNATEH-QLKDIN 2548
Fly 2549 KLIDQLPAESQRDMWKNSNANASDALEILKNVLEILEPVSVQTPKELEKAHGINRDLDLTNKDVS 2613
Fly 2614 QANKQLDDVEGSVSKLSELAEDIEEQQHRVGSQSRQLG---QEIENLKAQVEAARQLANSIKVGV 2675
Fly 2676 NFKPSTILELKTPEKTKLLATRTNLSTYFR---TTEPSG----FLLYLGNDNKTAQKNNDFVAVE 2733
Fly 2734 IVNGYPILTIDLGNGPERITSDKYVADGRWYQAVVDRMG-----PNAKLTIREEL----PNGDVV 2789
Fly 2790 EHSKSGYLEGSQNILHVDKNSRLF-VGGYPGISDFNAPPDLTTNSFSGDIEDLKIGDESVGLWNF 2853
Fly 2854 VYGDDNDQGARERDVLLEKKKPVTGLRFKGNGYVQLNATSNLKSRSSIQFSFKADKDTSNGLLFF 2918
Fly 2919 YGRDKHYMSIEMIDGAIFFNISLGEGGGVQSGSQDRYNDNQWHKVQAERENRNGLLKVDD----- 2978
Fly 2979 -IVISRTNAPLEADLELPKLRRLYFGGHP----RRLNTSISLQPNFDGCIDNVVINQGVVDLTEY 3038
Fly 3039 VTGGGVEEGCSAKFSTVVSYAPHEYGFLRMNN--VSSDNNLHVVLHFKTTQPNGVLFYAANHD-Q 3100
Fly 3101 SSTIGLSLQDGLLKLNSMGSQLVI-------DDRILNDGEDHVVTVQHTQGELRLTVDDV---DN 3155
Fly 3156 KRLGS----PQPLILEGGDIFFAGLPDNYRTPRNALASLAYFVGCISDVTV-----NEEIINFAN 3211
Fly 3212 SAEKKNGNINGC----PPHVLAYEPSLVPSYYPSGD----NEVESPWSNADTLPPLKPDIESTLP 3268
Fly 3269 PTTPTTTTTTTTTTTSTTTTSTTTTTTTPSPIVIDEEKEIEAKTPQKILTTRPPAKLNLPSDERC 3333
Fly 3334 KLPEQPNFDVDFTEAGYRFYGLREQRLQINSLPVKVRRHHDIGISFRTERPNGLLIYAGSKQRDD 3398
Fly 3399 FIAVYLLDGRVTYEIRVGAQLQAKITTEAELNDGTWHTVEVVRTQRKVSLLIDKLE-QPGSVDLN 3462
Fly 3463 AERSAPVLAVELPIYLGGVNKFLESEVKNLTDFKTEVPYFNGCLKNIKFDAMDLETPPEEFGVVP 3527
Fly 3528 C-SEQVERGLFFNNQKAFVKIFDHFDVGTEMKISFDFRPRDPNGLLFSVHGKNSYAILELVD-NT 3590
Fly 3591 LYFTVKTDLKNIVSTNYKLPNNESFCDGKTRNVQAIKSKFVINIAVDFISS--------NPGVGN 3647
Fly 3648 EGSVITRTNRPLFLGGHVAFQRAPGIKTKKSFKGCISKVEVNQRMINIT-PNMVVGDIWQGYCP 3710 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanA | NP_476617.1 | LamNT | 18..271 | CDD:214532 | 143/270 (53%) |
EGF_Lam | 272..>314 | CDD:238012 | 22/41 (54%) | ||
EGF_Lam | 332..389 | CDD:238012 | 32/56 (57%) | ||
EGF_Lam | 402..443 | CDD:238012 | 8/40 (20%) | ||
EGF_Lam | 448..491 | CDD:238012 | 15/42 (36%) | ||
Laminin_EGF | 495..543 | CDD:278482 | 5/47 (11%) | ||
Laminin_EGF | 541..589 | CDD:278482 | 23/47 (49%) | ||
Laminin_EGF | 587..634 | CDD:278482 | 12/47 (26%) | ||
EGF_Lam | 631..673 | CDD:238012 | 9/41 (22%) | ||
Laminin_EGF | 677..729 | CDD:278482 | 21/53 (40%) | ||
Laminin_EGF | 732..782 | CDD:278482 | 19/49 (39%) | ||
EGF_Lam | 785..828 | CDD:238012 | 16/42 (38%) | ||
CBM6-CBM35-CBM36_like | 831..966 | CDD:271143 | 52/137 (38%) | ||
Laminin_EGF | 1375..1423 | CDD:278482 | 27/47 (57%) | ||
EGF_Lam | 1420..1457 | CDD:238012 | 16/36 (44%) | ||
Laminin_EGF | 1466..1516 | CDD:278482 | 18/50 (36%) | ||
Laminin_EGF | 1514..1562 | CDD:278482 | 23/47 (49%) | ||
LamB | 1632..1760 | CDD:214597 | 40/139 (29%) | ||
Laminin_EGF | <1775..1801 | CDD:278482 | 15/25 (60%) | ||
EGF_Lam | 1808..1851 | CDD:238012 | 25/42 (60%) | ||
EGF_Lam | 1859..1907 | CDD:214543 | 23/47 (49%) | ||
EGF_Lam | 1916..1968 | CDD:238012 | 6/51 (12%) | ||
EGF_Lam | 1969..2015 | CDD:238012 | 7/45 (16%) | ||
EGF_Lam | 2016..>2054 | CDD:238012 | 0/37 (0%) | ||
EGF_Lam | 2063..>2097 | CDD:238012 | 1/33 (3%) | ||
Laminin_I | 2129..2385 | CDD:283627 | 54/271 (20%) | ||
Tar | 2278..2662 | CDD:223910 | 95/419 (23%) | ||
Laminin_II | 2566..2700 | CDD:283628 | 30/136 (22%) | ||
LamG | 2674..2843 | CDD:238058 | 50/185 (27%) | ||
LamG | 2878..3029 | CDD:238058 | 37/160 (23%) | ||
LamG | 3078..3205 | CDD:214598 | 42/146 (29%) | ||
LamG | 3349..3512 | CDD:238058 | 40/163 (25%) | ||
LamG | 3535..3689 | CDD:238058 | 33/162 (20%) | ||
Lama3 | NP_001380677.1 | LamNT | 42..293 | CDD:214532 | 141/254 (56%) |
EGF_Lam | 294..340 | CDD:238012 | 25/48 (52%) | ||
EGF_Lam | 351..419 | CDD:238012 | 35/67 (52%) | ||
EGF_Lam | 421..461 | CDD:238012 | 22/87 (25%) | ||
Laminin_EGF | 487..534 | CDD:395007 | 23/47 (49%) | ||
EGF_Lam | 531..573 | CDD:238012 | 20/86 (23%) | ||
Laminin_EGF | 627..677 | CDD:395007 | 19/49 (39%) | ||
EGF_Lam | 680..723 | CDD:238012 | 16/42 (38%) | ||
Laminin_EGF | 1265..1313 | CDD:395007 | 27/47 (57%) | ||
EGF_Lam | 1310..1353 | CDD:238012 | 20/43 (47%) | ||
EGF_Lam | 1355..1400 | CDD:238012 | 15/44 (34%) | ||
EGF_Lam | 1403..1453 | CDD:238012 | 24/49 (49%) | ||
Laminin_B | 1517..1651 | CDD:395006 | 41/146 (28%) | ||
EGF_Lam | 1685..1731 | CDD:238012 | 26/48 (54%) | ||
EGF_Lam | 1733..1784 | CDD:238012 | 25/55 (45%) | ||
Laminin_I | 1846..2103 | CDD:310534 | 54/270 (20%) | ||
SMC_prok_B | 2031..>2387 | CDD:274008 | 90/387 (23%) | ||
Laminin_II | 2287..2415 | CDD:368703 | 31/143 (22%) | ||
LamG | 2434..2569 | CDD:214598 | 41/143 (29%) | ||
LamG | 2601..2741 | CDD:238058 | 37/156 (24%) | ||
LamG | 2768..2900 | CDD:238058 | 45/161 (28%) | ||
LamG | 2992..3134 | CDD:238058 | 48/214 (22%) | ||
LamG | 3158..3309 | CDD:238058 | 33/162 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 60 | 1.000 | Domainoid score | I10319 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1919at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003375 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X3259 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.920 |