Sequence 1: | NP_476617.1 | Gene: | LanA / 38723 | FlyBaseID: | FBgn0002526 | Length: | 3712 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001289148.1 | Gene: | Ush2a / 289369 | RGDID: | 628777 | Length: | 5191 | Species: | Rattus norvegicus |
Alignment Length: | 4557 | Identity: | 902/4557 - (19%) |
---|---|---|---|
Similarity: | 1449/4557 - (31%) | Gaps: | 1568/4557 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 39 ATATCGQDTDGPELY-------------------CKLVGANTEHDHI--------DYSVIQGQVC 76
Fly 77 DYCDPTVPE--------RNHPPENAI-----DGTEAWWQSPPLSRGMKFNE-VNLTINFEQ-EFH 126
Fly 127 VAYLFIRMGNSPRPGLWTLEKSTDYGKTWTPWQHFSDTPADCETYFGKDTYKPITRDDDVICTTE 191
Fly 192 YSKIVPLENGEIPVMLL----NERPSSTNYFNSTVLQEWTRATNVRIRLLRTKNLLGHLMSVARQ 252
Fly 253 DPTVTRRYFYSIKDISIGGRCMCNGHADTCDVKDPKSPVRILACRCQHH--TCGIQCNECCPGFE 315
Fly 316 QKKWRQNTNARPFNCEPCNCHGHSNECKYDE-------EVNRKGLSLDIHGHYDGGGVCQNCQHN 373
Fly 374 TVGINCNKCKPKYYRPKGKHWNETDVCSPCQCDYFFSTGH---CEEETGNCECRAAFQPPSCDSC 435
Fly 436 AYGYYGY-----PNCRECECNLNGT--NGYHCEAESGQQCPCKINFAGAYCKQCAEGY-----YG 488
Fly 489 FPECKACECNKIGSITNDCNVTTGECKCLTNFGGDNCERCKHGYFNYP--TCSYCDCDNQGTES- 550
Fly 551 EICNKQSGQCICREGFGGPRCDQCLPGFYNYPD-----CKPCNCSSTG--SSAITCD-NTGKCNC 607
Fly 608 LNNFAGKQCTLCTAGYY-----SYPDCLPCHCDSHGS-QGVSCNS-DGQCLCQPNFDGRQCDSCK 665
Fly 666 EGFYNFP----SCEDCNCDPAGVIDKFAGCGSVPVGELCKCKE-RVTGRICNECKPLYWNLNISN 725
Fly 726 TEGCEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRDGTFDLDSASLFGCK------- 783
Fly 784 ------DCSCDVGGSWQSVCDKISGQCKCHPRITGLACTQPLTTHFFPTLHQFQYEY-------- 834
Fly 835 -EDGSLPSGTQVRYDYDEAAFPGFSSKGYVVFNAIQNDVRNEVNVFKSSLYRIVLRYVNPNAE-- 896
Fly 897 --NVTATISVTSDN-------------PLEVDQHVKVLLQPT----SEPQFVTVAGPLGVKPSAI 942
Fly 943 V--LDP-GRYVFTTKANKNVMLDYFVLLPAAYYEA-----------------------------G 975
Fly 976 ILTR-------------------------HISNPCELGNMELCR-------------HYKYA--- 999
Fly 1000 --------------------SVEVF--SPAATPFVIGENSKP-------TNPVETYTDPE----H 1031
Fly 1032 LQIVSHVG---DIPVLSGSQNELHYIVDVPRSGRYIFVIDYISDRNFPDSYYINLKLKDNPDSET 1093
Fly 1094 SVLLYPCLYSTICRTSVNEDGMEKSFYINKEDLQPVIISADIEDGSRFPIIS-VTAIPVD-QW-- 1154
Fly 1155 SIDYINPSPVCVIHDQQCATPKFRSVPDSKKIEF---------ETDHEDRIATNKPPYASLDERV 1210
Fly 1211 KL--VHLDSQNEATIVIESKVDATKPNLFVILVKYYQP---SHPKYQVYYTLTAG--KNQY-DGK 1267
Fly 1268 F-DIQHCPSSSGCRGVIRPAGEGSFEIDDEFKFTITTDRSQSVWLDYLVVVPLKQYNDDLLVEET 1331
Fly 1332 FDQTKEFIQNCGHDHF------HITHNASDFCKKSVFSLTADYNSGA-LPCNCDYAGSTSFECHP 1389
Fly 1390 FGGQCQCKPNVIERTCGACRSRYYGFPDCKPCKCPNSAMCEPTTGECMCPPNVIGDLCEKCAPNT 1454
Fly 1455 YGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQNIEG---RACDVCSNGYFNFPHCEQCSC 1516
Fly 1517 HKPGTELEVCDKIDGACFCKKNVVGRDCDQCVDGTYNLQESNPDGCTTCFCFGKTSRCDSAYLRV 1581
Fly 1582 YNVSLLKHVS--------ITTPEFHEESIKFDMWPVPAD-EILLNETTLKADF--TLREVNDERP 1635
Fly 1636 AYFGVL-----------DYLLNQNNHISAYGGD--LAYTLHFTSGFDGKYIVAPDVILFSEHNAL 1687
Fly 1688 VHTSYEQPSRNEPFTNRVNI--------VESNFQTISGKPVSRADFMMVLRDLKVIFIRANYW-E 1743
Fly 1744 QTLVTHLSDVYLTLA-DEDADGTGEYQFLAVERCSCPPGYSGHSCE----DCAPGYYRDPSG--P 1801
Fly 1802 YGGYCIPCECNGHSETCDCATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICACPLPFD 1866
Fly 1867 SNNFATSCEISESGDQIHCECKPGYTGPRCESCANGFYGEPESIGQVCKPCECSGN--------- 1922
Fly 1923 -----INPEDQGSCDTRTGE----------------CLRCLNNT---------FGAACNL----- 1952
Fly 1953 --CAPG-FYGDAIKLKNCQSCDCDDLGTQTCDPFVGVC--TCHENVIGDRCDRCKPDHYGFESGV 2012
Fly 2013 GCRACDCGAASNSTQCDPHTGHCACKSGVTGRQCDRCAVDHWKYEKDGCTPCNCNQGYSRGFGCN 2077
Fly 2078 PN----------TGK-CQCLPGVIGDRCDACPNRWV--LIKDEGCQECNNCHHALLDVTDRMRYQ 2129
Fly 2130 IDSVLEDFNSVTLAFFTSQKLNYYDQLADELEPKVKLLDPNSVDLSPSKKANSELESD------- 2187
Fly 2188 ----AKSYAKQVNQTLANAFDIRERSSTTLGNITVAYDEAVKSADQAKEAIASVEALSKNLEAAA 2248
Fly 2249 STKIDAALE-------------QAQHILGQINGTSIELTPNEQVLEKARKLYEEVNTLVLPIKAQ 2300
Fly 2301 NKSLNALKNDIGEFSD-----HLED--------LFN---------WSEASQAKSADVERRNVANQ 2343
Fly 2344 KAFDNSK-FDTVS---------------EQKLQAEK------NIKDAGNFL---------INGDL 2377
Fly 2378 TLNQINQKLDNLRDALNELNSFNKNVDEELPVREDQHKEADALTDQAEQKAAELAIKAQDLAAQY 2442
Fly 2443 TDMTASAEPAIKAATAY---------------SGIVEAVEAAQK-----------LSQDAISAAG 2481
Fly 2482 NATDKTDG--IEERAHLAD-----TGSTDLLQRARQSLQKVQDDLEPRLNASAGKVQ-------- 2531
Fly 2532 ---KISAVNNATEHQL--KDINKLIDQLPAESQRDM-WK-NSNANASD-ALEILKNVLEILEPVS 2588
Fly 2589 VQTPKELEKAH-------------GINR------------------------------------- 2603
Fly 2604 ---DLDLTNKDVSQANKQLDDVEGSVS------------------------KLSELAEDIEEQ-- 2639
Fly 2640 ------QHRVGS--------------------------QSRQLGQEIENLKAQVEAARQLANS-- 2670
Fly 2671 IKVGV---------NFKPSTILELKTPEKTK---LLATRTNLSTYFRTTEPSGFLLYLGNDNKTA 2723
Fly 2724 QKNNDFVAV----EIVNGYPIL--TIDLGNGPERIT---------------------------SD 2755
Fly 2756 KYVADGRWYQAVVDRMGPNAKLTIREE-----LPNGDVV-----------EHS-KSGY----LEG 2799
Fly 2800 SQNILHVDKNSRLFVG--------------------------GY--------------------- 2817
Fly 2818 --------PGI----SDF-NAPPDLTTNSFSGD--------------------IEDLKIGDESVG 2849
Fly 2850 LWN---FVYGDDNDQG-ARERDVLLEKKKPVTGLRFKGNGYVQLNATSNL--KSRSSIQFSFKAD 2908
Fly 2909 KDTSNGLL-----FFYGRDKH---YMSIEMIDGAIF-FNISL--GEGGGVQSGSQDRYNDNQWHK 2962
Fly 2963 VQAERENRNGLLKVDDIVI------SRTNAPLEADLELPKLRRLYFGGHPRRLNTSISLQP---- 3017
Fly 3018 -------NFDGCIDNVVI----NQGVVD----------------------------LTEY---VT 3040
Fly 3041 GGGV--EEGCSAKFSTVVSYAPH-EYGF-----LRMNNVSSDNNL----------------HVVL 3081
Fly 3082 HFKTTQ--------PNGV------------LFYAANHDQSSTIGLSLQDGLLKLNSM-------- 3118
Fly 3119 ---GSQLVIDDRILNDGEDHVV-----TVQHTQGELRLTVDDVDNKRLGSPQP------------ 3163
Fly 3164 LILEGGDI----FFAGLPDN-YRTPRNALASLAYF------------VGCISDVTVNEEIINFAN 3211
Fly 3212 SAEKKNGNINGCPP--HVLAYEPSLV----PSYYPSGDNEVESPWSNADTLPPLKPD--IESTLP 3268
Fly 3269 PTTPTTTTTTTTT-TTSTTTTSTTTTTTTPSPIVIDEEKEIEAKTPQKILTTRPPAKLNLPSDER 3332
Fly 3333 CKLPEQPNFDVDFTEAGYRFYGLREQRLQINSLP---VKVRRHHDIGISF-RTERPNGLL----- 3388
Fly 3389 IYAGSKQRDDFIA-------------------VYLLDGRVTYEIRVGAQLQA-KITTEAELNDGT 3433
Fly 3434 WHTVEVVRTQRKVSLLIDKLEQPGSVDLNAERSAP-----------VLAVELPIYLGGVNKFLES 3487
Fly 3488 EVKNLTDF--KTEVPYFNGCLKNIKFDAMDLETPPEEFGVVPCSEQVERGLFFNNQKAFVKIFDH 3550
Fly 3551 FDVGTEMKISFDFRPRDPNGLLFSVHGKNSYAILELVDNTLY------FTVKTDLKNIVSTNYKL 3609
Fly 3610 PNNESFC 3616 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanA | NP_476617.1 | LamNT | 18..271 | CDD:214532 | 57/277 (21%) |
EGF_Lam | 272..>314 | CDD:238012 | 19/43 (44%) | ||
EGF_Lam | 332..389 | CDD:238012 | 26/63 (41%) | ||
EGF_Lam | 402..443 | CDD:238012 | 11/48 (23%) | ||
EGF_Lam | 448..491 | CDD:238012 | 17/49 (35%) | ||
Laminin_EGF | 495..543 | CDD:278482 | 15/49 (31%) | ||
Laminin_EGF | 541..589 | CDD:278482 | 20/53 (38%) | ||
Laminin_EGF | 587..634 | CDD:278482 | 16/54 (30%) | ||
EGF_Lam | 631..673 | CDD:238012 | 21/47 (45%) | ||
Laminin_EGF | 677..729 | CDD:278482 | 16/52 (31%) | ||
Laminin_EGF | 732..782 | CDD:278482 | 18/49 (37%) | ||
EGF_Lam | 785..828 | CDD:238012 | 7/42 (17%) | ||
CBM6-CBM35-CBM36_like | 831..966 | CDD:271143 | 36/167 (22%) | ||
Laminin_EGF | 1375..1423 | CDD:278482 | 5/47 (11%) | ||
EGF_Lam | 1420..1457 | CDD:238012 | 5/36 (14%) | ||
Laminin_EGF | 1466..1516 | CDD:278482 | 13/52 (25%) | ||
Laminin_EGF | 1514..1562 | CDD:278482 | 9/47 (19%) | ||
LamB | 1632..1760 | CDD:214597 | 26/150 (17%) | ||
Laminin_EGF | <1775..1801 | CDD:278482 | 7/31 (23%) | ||
EGF_Lam | 1808..1851 | CDD:238012 | 2/42 (5%) | ||
EGF_Lam | 1859..1907 | CDD:214543 | 8/47 (17%) | ||
EGF_Lam | 1916..1968 | CDD:238012 | 17/98 (17%) | ||
EGF_Lam | 1969..2015 | CDD:238012 | 9/47 (19%) | ||
EGF_Lam | 2016..>2054 | CDD:238012 | 6/37 (16%) | ||
EGF_Lam | 2063..>2097 | CDD:238012 | 8/44 (18%) | ||
Laminin_I | 2129..2385 | CDD:283627 | 58/332 (17%) | ||
Tar | 2278..2662 | CDD:223910 | 90/596 (15%) | ||
Laminin_II | 2566..2700 | CDD:283628 | 37/259 (14%) | ||
LamG | 2674..2843 | CDD:238058 | 52/314 (17%) | ||
LamG | 2878..3029 | CDD:238058 | 31/184 (17%) | ||
LamG | 3078..3205 | CDD:214598 | 40/191 (21%) | ||
LamG | 3349..3512 | CDD:238058 | 39/204 (19%) | ||
LamG | 3535..3689 | CDD:238058 | 16/88 (18%) | ||
Ush2a | NP_001289148.1 | LamGL | 144..279 | CDD:214722 | 6/30 (20%) |
Laminin_N | 312..512 | CDD:295486 | 46/213 (22%) | ||
Laminin_EGF | 514..561 | CDD:278482 | 20/51 (39%) | ||
EGF_Lam | 570..635 | CDD:238012 | 30/75 (40%) | ||
EGF_Lam | 637..688 | CDD:238012 | 11/50 (22%) | ||
Laminin_EGF | 690..740 | CDD:278482 | 17/50 (34%) | ||
EGF_Lam | 742..787 | CDD:238012 | 13/44 (30%) | ||
Laminin_EGF | 791..840 | CDD:278482 | 17/48 (35%) | ||
Laminin_EGF | 843..893 | CDD:278482 | 14/49 (29%) | ||
EGF_Lam | 895..944 | CDD:238012 | 21/48 (44%) | ||
EGF_Lam | 946..996 | CDD:238012 | 16/54 (30%) | ||
EGF_Lam | 997..>1034 | CDD:238012 | 13/38 (34%) | ||
fn3 | 1054..1127 | CDD:278470 | 17/100 (17%) | ||
FN3 | 1152..1234 | CDD:238020 | 22/90 (24%) | ||
FN3 | 1238..1350 | CDD:238020 | 7/111 (6%) | ||
FN3 | 1361..1444 | CDD:214495 | 23/112 (21%) | ||
Laminin_G_2 | 1540..1668 | CDD:280389 | 34/173 (20%) | ||
LamG | 1706..1856 | CDD:238058 | 36/194 (19%) | ||
FN3 | 1946..2041 | CDD:238020 | 24/138 (17%) | ||
FN3 | 2044..2125 | CDD:238020 | 12/86 (14%) | ||
FN3 | 2133..2223 | CDD:238020 | 20/96 (21%) | ||
FN3 | 2231..2303 | CDD:238020 | 17/102 (17%) | ||
FN3 | 2319..2418 | CDD:238020 | 30/138 (22%) | ||
FN3 | 2422..2518 | CDD:238020 | 22/106 (21%) | ||
FN3 | 2530..2608 | CDD:238020 | 9/83 (11%) | ||
FN3 | 2610..2708 | CDD:238020 | 20/114 (18%) | ||
FN3 | 2713..2788 | CDD:238020 | 14/80 (18%) | ||
FN3 | 2810..2909 | CDD:238020 | 15/100 (15%) | ||
FN3 | 2914..3004 | CDD:238020 | 13/89 (15%) | ||
FN3 | <3439..3484 | CDD:238020 | 4/44 (9%) | ||
FN3 | 3487..3564 | CDD:238020 | 14/79 (18%) | ||
FN3 | 3584..3662 | CDD:238020 | 12/77 (16%) | ||
FN3 | 3670..3748 | CDD:238020 | 16/83 (19%) | ||
FN3 | 3762..3852 | CDD:238020 | 23/120 (19%) | ||
FN3 | 3865..3950 | CDD:238020 | 19/109 (17%) | ||
FN3 | 3954..4051 | CDD:238020 | 24/106 (23%) | ||
FN3 | 4151..4248 | CDD:238020 | 19/96 (20%) | ||
FN3 | 4258..4341 | CDD:238020 | |||
FN3 | 4346..4418 | CDD:238020 | |||
FN3 | 4433..4517 | CDD:238020 | |||
FN3 | 4519..4617 | CDD:238020 | |||
FN3 | 4643..4710 | CDD:238020 | |||
FN3 | 4722..4798 | CDD:238020 | |||
FN3 | 4815..4916 | CDD:238020 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |