DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanA and Ush2a

DIOPT Version :9

Sequence 1:NP_476617.1 Gene:LanA / 38723 FlyBaseID:FBgn0002526 Length:3712 Species:Drosophila melanogaster
Sequence 2:NP_001289148.1 Gene:Ush2a / 289369 RGDID:628777 Length:5191 Species:Rattus norvegicus


Alignment Length:4557 Identity:902/4557 - (19%)
Similarity:1449/4557 - (31%) Gaps:1568/4557 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 ATATCGQDTDGPELY-------------------CKLVGANTEHDHI--------DYSVIQGQVC 76
            :|...||..:|.||:                   .:|...:..|.||        .:..:...|.
  Rat   248 STVLIGQSLNGSELFVGRMQDFRLYNVSLTNREILELFSGDLPHLHIQSHCRCPGSHPRVHPSVQ 312

  Fly    77 DYCDPTVPE--------RNHPPENAI-----DGTEAWWQSPPLSRGMKFNE-VNLTINFEQ-EFH 126
            .||.|...|        |.:|..:.:     |.....|.|...:...:.|: |.::|:.|. ::.
  Rat   313 QYCIPNGVEDTLQHRVSRLNPEAHPLSFINDDDVATSWISHVFTDITQLNQGVAISIDLENGQYQ 377

  Fly   127 VAYLFIRMGNSPRPGLWTLEKSTDYGKTWTPWQHFSDTPADCETYFGKDTYKPITRDDDVICTTE 191
            |..:.||. :||:|....:::.......|..||:|:   .:|..: |......:...:.|.| .:
  Rat   378 VFQITIRF-SSPQPVAMRIQRKKADKSLWEDWQYFA---RNCSVW-GMKNNGDLENPNSVNC-LQ 436

  Fly   192 YSKIVPLENGEIPVMLL----NERPSSTNYFNSTVLQEWTRATNVRIRLLRTKNLLGHLMSVARQ 252
            :...:|..:|.:...||    ..||...:::||::|||:..||.:|:..........|.:.    
  Rat   437 FPDFIPFSHGNVTFDLLTSGQKHRPGDYDFYNSSLLQEFMTATQIRLYFRGLFYPAWHTVD---- 497

  Fly   253 DPTVTRRYFYSIKDISIGGRCMCNGHADTCDVKDPKSPVRILACRCQHH--TCGIQCNECCPGFE 315
                :|..:|::.:|:|.|||.|:|||:|||  ..:.|.:   |.|..|  |.|.||..|.|.:.
  Rat   498 ----SRHRYYAVDEITIIGRCQCHGHAETCD--RTRRPYQ---CLCSPHSFTEGPQCGRCSPLYN 553

  Fly   316 QKKWRQNTNARPFNCEPCNCHGHSNECKYDE-------EVNRKGLSLDIHGHYDGGGVCQNCQHN 373
            .|.:|.......|||:||.||||::.|.||.       |.||           .|||||.:|||:
  Rat   554 DKPFRSGNKVHAFNCKPCQCHGHASSCHYDASMDPFPLEYNR-----------GGGGVCDDCQHH 607

  Fly   374 TVGINCNKCKPKYYRPKGKHWNETDVCSPCQCDYFFSTGH---CEEETGNCECRAAFQPPSCDSC 435
            |.|.||..|:..:|||.|....:.:||..|.|:...:...   |:...|.|:|:.......|..|
  Rat   608 TTGRNCESCQDYFYRPIGADPADPEVCKHCDCNRDGTRNGSLLCDLVGGQCDCKRRVSGRRCFRC 672

  Fly   436 AYGYYGY-----PNCRECECNLNGT--NGYHCEAESGQQCPCKINFAGAYCKQCAEGY-----YG 488
            ..|:||.     ..||.|:||.:||  ....|...|| ||.||.|..|..|.:|:.|:     ..
  Rat   673 HIGFYGLQALDPDGCRPCDCNPSGTVDGDITCHHNSG-QCSCKANVIGLRCDRCSFGFKFLRSLN 736

  Fly   489 FPECKACECNKIGSITNDCNVTTGECKCLTNFGGDNCERCKHGYFNYP--TCSYCDCDNQGTES- 550
            ...|:.|.||..||:...|:..:|:|.|.....|..|:.|:..::..|  .|..|||:..||:: 
  Rat   737 ADGCEPCHCNLHGSVNQLCDPLSGQCVCKKEAKGLRCDVCRENFYGLPWSACEVCDCNRAGTQAG 801

  Fly   551 EICNKQSGQCICREGFGGPRCDQCLPGFYNYPD-----CKPCNCSSTG--SSAITCD-NTGKCNC 607
            .:|:.::|||:|:...||.||.:|..|::|...     |.||||..||  :.::.|| :||:|.|
  Rat   802 TVCDAETGQCVCKPSVGGRRCSECKEGYFNLRQNDSHLCLPCNCEKTGTVNGSLLCDKSTGQCPC 866

  Fly   608 LNNFAGKQCTLCTAGYY-----SYPDCLPCHCDSHGS-QGVSCNS-DGQCLCQPNFDGRQCDSCK 665
            .....|.:|..|....:     :...|..|.|||.|: .|.:|:. .|||||.|:..||:|:.|:
  Rat   867 KLGVTGLRCHQCEPHRFNLTVDNLQGCQACECDSLGTLPGSTCDPVSGQCLCLPHRQGRRCERCQ 931

  Fly   666 EGFYNFP----SCEDCNCDPAGVIDKFAGCGSVPVGELCKCKE-RVTGRICNECKPLYWNLNISN 725
            .|||:.|    .|..|:|..||.:...  |.|| .|: |.|:: ..||:.|::|:..|:..: ..
  Rat   932 PGFYSSPGNATGCLPCSCHTAGAVSHI--CNSV-TGQ-CSCRDPSTTGQSCHQCQDHYFGFD-PR 991

  Fly   726 TEGCEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRDGTFDLDSASLFGCK------- 783
            |..|:.|.|..:|.::  :||...:|||.||....|.:|..|..|...||..:||||.       
  Rat   992 TGRCQPCHCHLEGALN--ETCDVVTGQCFCKEFVTGSKCDICVPGASHLDVNNLFGCSKTPSQQP 1054

  Fly   784 ------DCSCDVGGSWQSVCDKISGQCKCHPRITGLACTQPLTTHFFPTLHQFQYEY-------- 834
                  ..|..:..|| |..|                         ||..|...|..        
  Rat  1055 PPRGRVQSSSAINLSW-SPPD-------------------------FPNAHWLTYTLFRDDSEIY 1093

  Fly   835 -EDGSLPSGTQVRYDYDEAAFPGFSSKGYVVFNAIQNDVRNEVNVFKSSLYRIVLRYVNPNAE-- 896
             .|...|..||  |..|.:..|..:...|:..:.:.:..|:...::|:          .|...  
  Rat  1094 TTDDQHPYYTQ--YFLDTSLSPHTAYSYYIETSNVHSSTRSIPVIYKT----------KPEGSEG 1146

  Fly   897 --NVTATISVTSDN-------------PLEVDQHVKVLLQPT----SEPQFVTVAGPLGVKPSAI 942
              |:|..|.|.||:             |:|     |.:|..|    :|| .|:..||   :.||.
  Rat  1147 HLNLTHIIPVASDSITLVWTGLSNHSGPIE-----KYVLSCTPVDHTEP-CVSYEGP---ETSAT 1202

  Fly   943 V--LDP-GRYVFTTKANKNVMLDYFVLLPAAYYEA-----------------------------G 975
            :  |.| .:|.|:.:...|....|...:.....:|                             |
  Rat  1203 IRNLVPFTQYCFSVQGCTNGSCLYSSPITVTTAQAPPQRQEPPTVWKISPTELKVEWSRPVDSNG 1267

  Fly   976 ILTR-------------------------HISNPCELGNMELCR-------------HYKYA--- 999
            ::.|                         |.::|....:..:.:             |.:||   
  Rat  1268 VIIRYELYMKRWPSTEESLVFESHGWFHSHPASPSANQSENVLQDPQVSTVLSGLDPHTEYAFRV 1332

  Fly  1000 --------------------SVEVF--SPAATPFVIGENSKP-------TNPVETYTDPE----H 1031
                                |..||  :|:.:|.      .|       ..|.|.:|..|    .
  Rat  1333 LAVNMAGSVSSAWASERTGESAPVFMAAPSVSPL------SPYSLSVSWEKPAENFTRGEIIGYK 1391

  Fly  1032 LQIVSHVG---DIPVLSGSQNELHYIVDVPRSGRYIFVIDYISDRNFPDSYYINLKLKDNPDSET 1093
            :.:||...   |:||:....  :|:                   ....|..||..:||  |....
  Rat  1392 ISMVSERSPQRDVPVMCSKL--VHF-------------------AESQDQSYIVQRLK--PYRTY 1433

  Fly  1094 SVLLYPCLYSTICRTSVNEDGMEKSFYINKEDLQPVIISADIEDGSRFPIIS-VTAIPVD-QW-- 1154
            |..:..| ||..|.||...:|.             .:.:|..:  .|.|::: ||:..|. :|  
  Rat  1434 SFTVSLC-YSVGCVTSALGEGQ-------------TLAAAPAQ--LRSPMVTGVTSTTVHIRWLP 1482

  Fly  1155 SIDYINPSPVCVIHDQQCATPKFRSVPDSKKIEF---------ETDHEDRIATNKPPYASLDERV 1210
            ..:...|.|:..:..::...|. .:...:|...|         .|.|.|.|......:..:.|.:
  Rat  1483 PAEVNGPPPLYRLERRESFLPA-ATAARTKGTRFMGDGYCRFPRTAHPDFIGIKASFWTRVPEGL 1546

  Fly  1211 KL--VHLDSQNEATIVIESKVDATKPNLFVILVKYYQP---SHPKYQVYYTLTAG--KNQY-DGK 1267
            .|  :|.|:|.|               .|.:.:|..:|   .:|:..:....||.  ..|| ||:
  Rat  1547 ILLALHPDNQEE---------------YFALQLKSGRPYFLYNPQGSLVEVTTADDHSQQYSDGQ 1596

  Fly  1268 F-DIQHCPSSSGCRGVIRPAGEGSFEIDDEFKFTITTDRSQSVWLDYLVVVPLKQYNDDLLVEET 1331
            : :|.          .||....|...:|:::     ||.|.|:             |...:   |
  Rat  1597 WHEIT----------AIRHQSFGQITLDEQY-----TDSSASL-------------NGSSV---T 1630

  Fly  1332 FDQTKEFIQNCGHDHF------HITHNASDFCKKSVFSLTADYNSGA-LPCNCDYAGSTSFECHP 1389
            ...|:.|:......|.      .|.......|.|.|..|.....||. ||  .|:..|..     
  Rat  1631 GGYTRLFVGGLPQGHTILQKRPEIVRRGFVGCLKDVSILKGSSPSGTWLP--LDWQSSEE----- 1688

  Fly  1390 FGGQCQCKPNVIERTCGACRSRYYGFPDCKPCKCPNSAMCEPTTGECMCPPNVIGDLCEKCAPNT 1454
                   :.||           ::.:..|            ||            ||.|......
  Rat  1689 -------QVNV-----------HHSWEGC------------PT------------DLEEGVQFLG 1711

  Fly  1455 YGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQNIEG---RACDVCSNGYFNFPHCEQCSC 1516
            .||.::......|.....|:. ..|.|..||......|.||   .|.:: .:|..:|    |.:.
  Rat  1712 AGFLELRSDTFHAAKDFEISL-KFQTDQLNGLLLFIHNTEGLDFLAMEL-KSGLLSF----QLNS 1770

  Fly  1517 HKPGTELEVCDKIDGACFCKKNVVGRDCDQCVDGTYNLQESNPDGCTTCFCFGKTSRCDSAYLRV 1581
            .:..|.:||             .:||  ..| ||.:|               ..|.|.:.:.:.|
  Rat  1771 SRILTRVEV-------------RLGR--THC-DGKWN---------------RVTIRREGSMVSV 1804

  Fly  1582 YNVSLLKHVS--------ITTPEFHEESIKFDMWPVPAD-EILLNETTLKADF--TLREVNDERP 1635
            ....|.|..|        :|:|.:        :..:|.: :......||:..|  .::||...|.
  Rat  1805 GVNELTKSTSRAGDQPPLLTSPVY--------LGGIPQELQASYRHLTLEQGFRGCVKEVAFTRG 1861

  Fly  1636 AYFGVL-----------DYLLNQNNHISAYGGD--LAYTLHFTSGFDGKYIVAPDVILFSEHNAL 1687
            |...:.           |..|:.::.::..|.|  |.|.....|.::..  :.|    |:|:...
  Rat  1862 AVVNLASVSSRAVRVNQDGCLSSDSTVNCGGNDSILVYRGSRQSVYESG--LQP----FTEYLYR 1920

  Fly  1688 VHTSYEQPSRNEPFTNRVNI--------VESNFQTISGKPVSRADFMMVLRDLKVIFIRANYW-E 1743
            |..|::..|.:..::....:        ..|..|:|:|..|..|                  | |
  Rat  1921 VTASHKGGSVSSDWSRGRTLGSAPHSVPTPSRAQSINGYSVEVA------------------WNE 1967

  Fly  1744 QTLVTHLSDVYLTLA-DEDADGTGEYQFLAVERCSCPPGYSGHSCE----DCAPGYYRDPSG--P 1801
            ..:|..:.:.|:..| .||               |..|.....|.|    |...|..   :|  |
  Rat  1968 PAMVKGVLEKYILKAYSED---------------SAQPHMPSASTEFNNTDIRTGIL---TGLHP 2014

  Fly  1802 YGGYCIPCECNGHSETCDCATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICACPLPFD 1866
            :..|.:....        |:...|::..........:..............|........| |..
  Rat  2015 FHSYAVTLTA--------CSRAGCTESSRALSISTPQEAPQEVQAPVAEALPNSLSFFWSP-PRQ 2070

  Fly  1867 SNNFATSCEISESGDQIHCECKPGYTGPRCESCANGFYGEPESIGQVCKPCECSGN--------- 1922
            :|...|...:...|..::......||    .:....|.....::| .|....|:.:         
  Rat  2071 ANGIITQYSLYMDGRLVYTGKGQNYT----VTDLRVFTAYEITVG-ACTRAGCTNSSRVILHTAQ 2130

  Fly  1923 -----INPEDQGSCDTRTGE----------------CLRCLNNT---------FGAACNL----- 1952
                 ::|......|:||..                .|..||.|         :.:..||     
  Rat  2131 LPPERVDPPVLAILDSRTVHIQWKQPRQLNGILERYILYTLNPTHNSTVWDVVYNSTENLQTHLL 2195

  Fly  1953 --CAPG-FYGDAIKLKNCQSCDCDDLGTQTCDPFVGVC--TCHENVIGDRCDRCKPDHYGFESGV 2012
              .:|| .|  .|||..|....|     .|.:|...:.  |..|.|...|.....||.:      
  Rat  2196 YHLSPGCLY--LIKLGACTGGGC-----TTSEPSQALMDETVPEGVPAPRAHSHSPDSF------ 2247

  Fly  2013 GCRACDCGAASNSTQCDPHTGHCACKSGVTGRQCDRCAVDHWKYEKDGCTPCNCNQGYSRGFGCN 2077
                       |.:..:|  ||   .:||         :..::...||....|.::.....:|.:
  Rat  2248 -----------NISWTEP--GH---PNGV---------ITTYELYLDGTLIHNSSELSCHAYGFD 2287

  Fly  2078 PN----------TGK-CQCLPGVIGDRCDACPNRWV--LIKDEGCQECNNCHHALLDVTDRMRYQ 2129
            |.          |.| |...|.|.....:|.|...|  .:|.||.:|......|......|:.| 
  Rat  2288 PGSLHTFQVQACTAKGCALGPLVENRTLEAPPEGTVNLFVKPEGSREAAVRWDAPPHPNGRLTY- 2351

  Fly  2130 IDSVLEDFNSVTLAFFTSQKLNYYDQLADELEPKVKLLDPNSVDLSPSKKANSELESD------- 2187
              |||     :|..|       |.||..|           |...||.:|..:|. :.|       
  Rat  2352 --SVL-----ITGNF-------YADQAGD-----------NYTLLSSTKTVHSS-KGDRLWVLVD 2390

  Fly  2188 ----AKSYAKQVNQTLANAFDIRERSSTTLGNITVAYDEAVKSADQAKEAIASVEALSKNLEAAA 2248
                ..:|..|||.:.:....:.:|.|             |:....|.:.:     ||..|.||.
  Rat  2391 RLVPCSNYTVQVNASNSQGSVLSDRVS-------------VEMPPGAPDGL-----LSPRLAAAT 2437

  Fly  2249 STKIDAALE-------------QAQHILGQINGTSIELTPNEQVLEKARKLYEEVNTLVLPIKAQ 2300
            .|.:.....             |.|..........:||.|....|     |..|| |.:.|....
  Rat  2438 PTSLQVVWSTPARNNAPGSPRYQLQMRPDPSTRGLLELFPIPSAL-----LSYEV-TGLQPFTVY 2496

  Fly  2301 NKSLNALKNDIGEFSD-----HLED--------LFN---------WSEASQAKSADVERRNVANQ 2343
            ...|.|.......:||     ..||        :.|         |.:.::...|      :.:.
  Rat  2497 EFRLVATNGFGSAYSDWTPLMTTEDKPGPMDAPVLNVKAGMMSVAWRKPTECNGA------ITHY 2555

  Fly  2344 KAFDNSK-FDTVS---------------EQKLQAEK------NIKDAGNFL---------INGDL 2377
            ..:.:.: :.|||               ..:.|.|.      ::..|...:         |.|..
  Rat  2556 NIYQHGRLYLTVSGGVTNCTVVHLRPHTAYQFQIEACSSKGCSMSPASETVWTLPGTPEGIPGPE 2620

  Fly  2378 TLNQINQKLDNLRDALNELNSFNKNVDEELPVREDQHKEADALTDQAEQKAAELAIKAQDLAAQY 2442
            .|.....|:.........|:...:|:..|..|:|             :::...|.|..:..|.::
  Rat  2621 LLPYTPTKIIVSWQPPTHLDGLVENITIERRVKE-------------QEEVRSLVILPRSQAVRF 2672

  Fly  2443 TDMTASAEPAIKAATAY---------------SGIVEAVEAAQK-----------LSQDAISAAG 2481
            .|    .:||::..|.|               |..||......:           |..||:....
  Rat  2673 ID----NDPALRPWTHYEYRVLGSTLNGGTNSSAWVEVTTRPSRPSGVQPPTVHVLGPDAVEVTW 2733

  Fly  2482 NATDKTDG--IEERAHLAD-----TGSTDLLQRARQSLQKVQDDLEPRLNASAGKVQ-------- 2531
            .|....:|  :.....:.|     |..|..:      |..:...|.|..|.|...|.        
  Rat  2734 KAPLIRNGDIVSYEIRMPDPLIEITNVTSFV------LSHLVKHLIPFTNYSVSIVACSGGHGYL 2792

  Fly  2532 ---KISAVNNATEHQL--KDINKLIDQLPAESQRDM-WK-NSNANASD-ALEILKNVLEILEPVS 2588
               ..|....||.|..  :::..|...|..:|...: |: .|..|..: ..|:|:.  :|.:|::
  Rat  2793 GGCTESLPTFATTHPALPQELTPLSISLLGQSYVGISWQPPSKPNGPNLRYELLRR--KIQQPLA 2855

  Fly  2589 VQTPKELEKAH-------------GINR------------------------------------- 2603
            ...|::|...|             |::|                                     
  Rat  2856 SNPPEDLNLWHNIYSGTRRFYEDKGLSRFTTYEYKLFVHNSLGFTPSQEVTVTTLAGSPERGATV 2920

  Fly  2604 ---DLDLTNKDVSQANKQLDDVEGSVS------------------------KLSELAEDIEEQ-- 2639
               .|:.|..||........|::|.|.                        .:..||.::|.|  
  Rat  2921 TASILNHTAIDVRWKRPTFQDLQGDVEYYTLFWSSGTSVESLKIFPDVDFHVIGHLAPNVEYQVF 2985

  Fly  2640 ------QHRVGS--------------------------QSRQLGQEIENLKAQVEAARQLANS-- 2670
                  .|.:.|                          ..|.:.....|..|.:..:...||:  
  Rat  2986 LLVFNGVHAINSTVVRVTTWEEEPRGMRPPEVVIINSTAVRVIWTSPSNPNAVITESSVYANNEL 3050

  Fly  2671 IKVGV---------NFKPSTILELKTPEKTK---LLATRTNLSTYFRTTEPSGFLLYLGNDNKTA 2723
            .|.|.         :..|.||.:::....||   :.::.|.:||...|  |||..:.:..|..:.
  Rat  3051 HKAGAGAPGSFTLEDLSPFTIYDIQVEVCTKDACVKSSGTQVSTAEDT--PSGISIPIIRDITSR 3113

  Fly  2724 QKNNDFVAV----EIVNGYPIL--TIDLGNGPERIT---------------------------SD 2755
            ....|:.|.    .|:.||.:|  |..|.:..:::|                           ..
  Rat  3114 SLQIDWTAPGNPNGIILGYDVLRKTWRLCSETQKLTDKPRDELCKAVKCQYPGNVCGHTCYSPGT 3178

  Fly  2756 KYVADGRWYQAVVDRMGPNAKLTIREE-----LPNGDVV-----------EHS-KSGY----LEG 2799
            |...||..|.       |....:..||     |||...|           :|. .||:    |.|
  Rat  3179 KVCCDGLLYD-------PQPGYSCCEEKYIALLPNSTGVCCGGRQREAQPDHQCCSGHYIRILPG 3236

  Fly  2800 SQNILHVDKNSRLFVG--------------------------GY--------------------- 2817
             :.....::::|:.||                          ||                     
  Rat  3237 -EICCPDERHNRVSVGFGDACCGTMPYATSGSQVCCAGKLQDGYRRQCCGGEMVSQDFKCCGGGE 3300

  Fly  2818 --------PGI----SDF-NAPPDLTTNSFSGD--------------------IEDLKIGDESVG 2849
                    ||:    .|: |....:..::.|||                    |.:.:...:.||
  Rat  3301 EGMVYSSLPGMLCCGQDYVNMSDTICCSASSGDSKAHVRGSDPMPVRCCHTELIPESQQCCDGVG 3365

  Fly  2850 LWN---FVYGDDNDQG-ARERDVLLEKKKPVTGLRFKGNGYVQLNATSNL--KSRSSIQFSFKAD 2908
             :|   :|..|:...| |.|...:.....|.|.......|....|||:::  .||..:.   ...
  Rat  3366 -YNPVKYVCSDEISAGMATEETRVCATVCPATMRATAHCGQCDFNATTHICTVSRGPLN---PIG 3426

  Fly  2909 KDTSNGLL-----FFYGRDKH---YMSIEMIDGAIF-FNISL--GEGGGVQSGSQDRYNDNQWHK 2962
            |:|:.||.     ..:..|::   ::..::....:: :.:|:  ..|.|.....:....::....
  Rat  3427 KETAEGLCSTAEEIVHSGDENTRSFIDTDLEPSTVYEYRVSVWNSYGRGFSQSVRASTREDVPQG 3491

  Fly  2963 VQAERENRNGLLKVDDIVI------SRTNAPLEADLELPKLRRLYFGGHPRRLNTSISLQP---- 3017
            |.|.|..|.|  ..:|::.      :::|.|:...:.|...|..:.|......:|. .:||    
  Rat  3492 VTAPRWARTG--NHEDVIFLTWKEPTQSNGPITHYILLRDGRERFQGAALSFTDTQ-GIQPLQEY 3553

  Fly  3018 -------NFDGCIDNVVI----NQGVVD----------------------------LTEY---VT 3040
                   ...||.|:..:    .:||::                            :.||   :.
  Rat  3554 SYQLKACTAAGCADSCKVVATATRGVLESVPPPNITAQSPETLHLSWSVPEKRNDAIKEYQLWLD 3618

  Fly  3041 GGGV--EEGCSAKFSTVVSYAPH-EYGF-----LRMNNVSSDNNL----------------HVVL 3081
            |.|:  .:....:..||....|| .|.|     ..:...||:.::                |:::
  Rat  3619 GKGLIYTDTNDRRQHTVTGLQPHTNYSFTLSACTSVGCTSSEPSVGQTLQAAPQGVWVTPRHIII 3683

  Fly  3082 HFKTTQ--------PNGV------------LFYAANHDQSSTIGLSLQDGLLKLNSM-------- 3118
            :..|.:        ||||            |......|||.|      |..|:.||.        
  Rat  3684 NSTTVELYWNPPERPNGVISQYRLRRNGSLLLVGGRDDQSFT------DKNLEPNSRYIYTLEAR 3742

  Fly  3119 ---GSQLVIDDRILNDGEDHVV-----TVQHTQGELRLTVDDVDNKRLGSPQP------------ 3163
               ||.|         .|:::|     |.:.......:||...|:..:..|.|            
  Rat  3743 TGGGSSL---------SEEYLVQMPMWTPEDVHPPCNVTVLGSDSIFVAWPAPGILLPKIPVEYS 3798

  Fly  3164 LILEGGDI----FFAGLPDN-YRTPRNALASLAYF------------VGCISDVTVNEEIINFAN 3211
            ::|.||::    |..||..: |      |.:||.|            |||               
  Rat  3799 ILLSGGNMMLLTFSVGLRQSAY------LKNLAPFTQYEIRIQACQEVGC--------------- 3842

  Fly  3212 SAEKKNGNINGCPP--HVLAYEPSLV----PSYYPSGDNEVESPWSNADTLPPLKPD--IESTLP 3268
                      |..|  ||...|.:.|    |.....|.:.:|..|:     ||.:|:  |.|.:.
  Rat  3843 ----------GVSPGTHVRTLEAAPVGLMPPLLKALGSHCIEVKWT-----PPTRPNGIITSYVI 3892

  Fly  3269 PTTPTTTTTTTTT-TTSTTTTSTTTTTTTPSPIVIDEEKEIEAKTPQKILTTRPPAKLNLPSDER 3332
            ...|..|...:.. ..|......|..|.|..|..:.|.: :.|...:.::               
  Rat  3893 HRRPADTEEESLLFVWSEGALEFTDDTDTLRPFTLYEYR-VRAWNSKGVV--------------- 3941

  Fly  3333 CKLPEQPNFDVDFTEAGYRFYGLREQRLQINSLP---VKVRRHHDIGISF-RTERPNGLL----- 3388
                :.|...|...||            ....||   |:|...|.:.::: ..|.||||:     
  Rat  3942 ----DSPWSSVQTLEA------------PPQDLPAPWVQVTSAHSVLLNWTEPEAPNGLISQYHV 3990

  Fly  3389 IYAGSKQRDDFIA-------------------VYLLDGRVTYEIRVGAQLQA-KITTEAELNDGT 3433
            ||   ::|.|..|                   ::.|:...||.|.|.|..:| |:::       .
  Rat  3991 IY---QERPDEAAPGSSTVHAFTVKGSSRQAHLFGLEPFTTYHIGVAAVNRAGKVSS-------P 4045

  Fly  3434 WHTVEVVRTQRKVSLLIDKLEQPGSVDLNAERSAP-----------VLAVELPIYLGGVNKFLES 3487
            |..::.:.:.....:.....::.|...|..:.|.|           |.:..||.|.|...:||..
  Rat  4046 WTLIKTLESAPSGLMNFTAEQREGGRALLLQWSEPVRTNGVIKAYNVFSDGLPEYSGLGRQFLFR 4110

  Fly  3488 EVKNLTDF--KTEVPYFNGCLKNIKFDAMDLETPPEEFGVVPCSEQVERGLFFNNQKAFVKIFDH 3550
            .:...|.:  ..|.....||..::.......|.||:. .:.|..:.||                 
  Rat  4111 RLAPFTLYILTLEACTAAGCAHSVPQTLWTEEAPPDS-QMAPTIQSVE----------------- 4157

  Fly  3551 FDVGTEMKISFDFRPRDPNGLLFSVHGKNSYAILELVDNTLY------FTVKTDLKNIVSTNYKL 3609
               .|.:::.:. :|.:|||.:..         .|::...|.      .||:.| :|.|.|.|..
  Rat  4158 ---PTSVRLHWS-QPANPNGKIIR---------YEVIRRRLQGEDWGNRTVQAD-ENTVFTEYNT 4208

  Fly  3610 PNNESFC 3616
            ..|...|
  Rat  4209 EGNGWVC 4215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanANP_476617.1 LamNT 18..271 CDD:214532 57/277 (21%)
EGF_Lam 272..>314 CDD:238012 19/43 (44%)
EGF_Lam 332..389 CDD:238012 26/63 (41%)
EGF_Lam 402..443 CDD:238012 11/48 (23%)
EGF_Lam 448..491 CDD:238012 17/49 (35%)
Laminin_EGF 495..543 CDD:278482 15/49 (31%)
Laminin_EGF 541..589 CDD:278482 20/53 (38%)
Laminin_EGF 587..634 CDD:278482 16/54 (30%)
EGF_Lam 631..673 CDD:238012 21/47 (45%)
Laminin_EGF 677..729 CDD:278482 16/52 (31%)
Laminin_EGF 732..782 CDD:278482 18/49 (37%)
EGF_Lam 785..828 CDD:238012 7/42 (17%)
CBM6-CBM35-CBM36_like 831..966 CDD:271143 36/167 (22%)
Laminin_EGF 1375..1423 CDD:278482 5/47 (11%)
EGF_Lam 1420..1457 CDD:238012 5/36 (14%)
Laminin_EGF 1466..1516 CDD:278482 13/52 (25%)
Laminin_EGF 1514..1562 CDD:278482 9/47 (19%)
LamB 1632..1760 CDD:214597 26/150 (17%)
Laminin_EGF <1775..1801 CDD:278482 7/31 (23%)
EGF_Lam 1808..1851 CDD:238012 2/42 (5%)
EGF_Lam 1859..1907 CDD:214543 8/47 (17%)
EGF_Lam 1916..1968 CDD:238012 17/98 (17%)
EGF_Lam 1969..2015 CDD:238012 9/47 (19%)
EGF_Lam 2016..>2054 CDD:238012 6/37 (16%)
EGF_Lam 2063..>2097 CDD:238012 8/44 (18%)
Laminin_I 2129..2385 CDD:283627 58/332 (17%)
Tar 2278..2662 CDD:223910 90/596 (15%)
Laminin_II 2566..2700 CDD:283628 37/259 (14%)
LamG 2674..2843 CDD:238058 52/314 (17%)
LamG 2878..3029 CDD:238058 31/184 (17%)
LamG 3078..3205 CDD:214598 40/191 (21%)
LamG 3349..3512 CDD:238058 39/204 (19%)
LamG 3535..3689 CDD:238058 16/88 (18%)
Ush2aNP_001289148.1 LamGL 144..279 CDD:214722 6/30 (20%)
Laminin_N 312..512 CDD:295486 46/213 (22%)
Laminin_EGF 514..561 CDD:278482 20/51 (39%)
EGF_Lam 570..635 CDD:238012 30/75 (40%)
EGF_Lam 637..688 CDD:238012 11/50 (22%)
Laminin_EGF 690..740 CDD:278482 17/50 (34%)
EGF_Lam 742..787 CDD:238012 13/44 (30%)
Laminin_EGF 791..840 CDD:278482 17/48 (35%)
Laminin_EGF 843..893 CDD:278482 14/49 (29%)
EGF_Lam 895..944 CDD:238012 21/48 (44%)
EGF_Lam 946..996 CDD:238012 16/54 (30%)
EGF_Lam 997..>1034 CDD:238012 13/38 (34%)
fn3 1054..1127 CDD:278470 17/100 (17%)
FN3 1152..1234 CDD:238020 22/90 (24%)
FN3 1238..1350 CDD:238020 7/111 (6%)
FN3 1361..1444 CDD:214495 23/112 (21%)
Laminin_G_2 1540..1668 CDD:280389 34/173 (20%)
LamG 1706..1856 CDD:238058 36/194 (19%)
FN3 1946..2041 CDD:238020 24/138 (17%)
FN3 2044..2125 CDD:238020 12/86 (14%)
FN3 2133..2223 CDD:238020 20/96 (21%)
FN3 2231..2303 CDD:238020 17/102 (17%)
FN3 2319..2418 CDD:238020 30/138 (22%)
FN3 2422..2518 CDD:238020 22/106 (21%)
FN3 2530..2608 CDD:238020 9/83 (11%)
FN3 2610..2708 CDD:238020 20/114 (18%)
FN3 2713..2788 CDD:238020 14/80 (18%)
FN3 2810..2909 CDD:238020 15/100 (15%)
FN3 2914..3004 CDD:238020 13/89 (15%)
FN3 <3439..3484 CDD:238020 4/44 (9%)
FN3 3487..3564 CDD:238020 14/79 (18%)
FN3 3584..3662 CDD:238020 12/77 (16%)
FN3 3670..3748 CDD:238020 16/83 (19%)
FN3 3762..3852 CDD:238020 23/120 (19%)
FN3 3865..3950 CDD:238020 19/109 (17%)
FN3 3954..4051 CDD:238020 24/106 (23%)
FN3 4151..4248 CDD:238020 19/96 (20%)
FN3 4258..4341 CDD:238020
FN3 4346..4418 CDD:238020
FN3 4433..4517 CDD:238020
FN3 4519..4617 CDD:238020
FN3 4643..4710 CDD:238020
FN3 4722..4798 CDD:238020
FN3 4815..4916 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1836
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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