DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanA and Ush2a

DIOPT Version :10

Sequence 1:NP_476617.1 Gene:LanA / 38723 FlyBaseID:FBgn0002526 Length:3712 Species:Drosophila melanogaster
Sequence 2:NP_001289148.1 Gene:Ush2a / 289369 RGDID:628777 Length:5191 Species:Rattus norvegicus


Alignment Length:4557 Identity:902/4557 - (19%)
Similarity:1449/4557 - (31%) Gaps:1568/4557 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 ATATCGQDTDGPELY-------------------CKLVGANTEHDHI--------DYSVIQGQVC 76
            :|...||..:|.||:                   .:|...:..|.||        .:..:...|.
  Rat   248 STVLIGQSLNGSELFVGRMQDFRLYNVSLTNREILELFSGDLPHLHIQSHCRCPGSHPRVHPSVQ 312

  Fly    77 DYCDPTVPE--------RNHPPENAI-----DGTEAWWQSPPLSRGMKFNE-VNLTINFEQ-EFH 126
            .||.|...|        |.:|..:.:     |.....|.|...:...:.|: |.::|:.|. ::.
  Rat   313 QYCIPNGVEDTLQHRVSRLNPEAHPLSFINDDDVATSWISHVFTDITQLNQGVAISIDLENGQYQ 377

  Fly   127 VAYLFIRMGNSPRPGLWTLEKSTDYGKTWTPWQHFSDTPADCETYFGKDTYKPITRDDDVICTTE 191
            |..:.||. :||:|....:::.......|..||:|:   .:|..: |......:...:.|.| .:
  Rat   378 VFQITIRF-SSPQPVAMRIQRKKADKSLWEDWQYFA---RNCSVW-GMKNNGDLENPNSVNC-LQ 436

  Fly   192 YSKIVPLENGEIPVMLL----NERPSSTNYFNSTVLQEWTRATNVRIRLLRTKNLLGHLMSVARQ 252
            :...:|..:|.:...||    ..||...:::||::|||:..||.:|:..........|.:.    
  Rat   437 FPDFIPFSHGNVTFDLLTSGQKHRPGDYDFYNSSLLQEFMTATQIRLYFRGLFYPAWHTVD---- 497

  Fly   253 DPTVTRRYFYSIKDISIGGRCMCNGHADTCDVKDPKSPVRILACRCQHH--TCGIQCNECCPGFE 315
                :|..:|::.:|:|.|||.|:|||:|||  ..:.|.:   |.|..|  |.|.||..|.|.:.
  Rat   498 ----SRHRYYAVDEITIIGRCQCHGHAETCD--RTRRPYQ---CLCSPHSFTEGPQCGRCSPLYN 553

  Fly   316 QKKWRQNTNARPFNCEPCNCHGHSNECKYDE-------EVNRKGLSLDIHGHYDGGGVCQNCQHN 373
            .|.:|.......|||:||.||||::.|.||.       |.||           .|||||.:|||:
  Rat   554 DKPFRSGNKVHAFNCKPCQCHGHASSCHYDASMDPFPLEYNR-----------GGGGVCDDCQHH 607

  Fly   374 TVGINCNKCKPKYYRPKGKHWNETDVCSPCQCDYFFSTGH---CEEETGNCECRAAFQPPSCDSC 435
            |.|.||..|:..:|||.|....:.:||..|.|:...:...   |:...|.|:|:.......|..|
  Rat   608 TTGRNCESCQDYFYRPIGADPADPEVCKHCDCNRDGTRNGSLLCDLVGGQCDCKRRVSGRRCFRC 672

  Fly   436 AYGYYGY-----PNCRECECNLNGT--NGYHCEAESGQQCPCKINFAGAYCKQCAEGY-----YG 488
            ..|:||.     ..||.|:||.:||  ....|...|| ||.||.|..|..|.:|:.|:     ..
  Rat   673 HIGFYGLQALDPDGCRPCDCNPSGTVDGDITCHHNSG-QCSCKANVIGLRCDRCSFGFKFLRSLN 736

  Fly   489 FPECKACECNKIGSITNDCNVTTGECKCLTNFGGDNCERCKHGYFNYP--TCSYCDCDNQGTES- 550
            ...|:.|.||..||:...|:..:|:|.|.....|..|:.|:..::..|  .|..|||:..||:: 
  Rat   737 ADGCEPCHCNLHGSVNQLCDPLSGQCVCKKEAKGLRCDVCRENFYGLPWSACEVCDCNRAGTQAG 801

  Fly   551 EICNKQSGQCICREGFGGPRCDQCLPGFYNYPD-----CKPCNCSSTG--SSAITCD-NTGKCNC 607
            .:|:.::|||:|:...||.||.:|..|::|...     |.||||..||  :.::.|| :||:|.|
  Rat   802 TVCDAETGQCVCKPSVGGRRCSECKEGYFNLRQNDSHLCLPCNCEKTGTVNGSLLCDKSTGQCPC 866

  Fly   608 LNNFAGKQCTLCTAGYY-----SYPDCLPCHCDSHGS-QGVSCNS-DGQCLCQPNFDGRQCDSCK 665
            .....|.:|..|....:     :...|..|.|||.|: .|.:|:. .|||||.|:..||:|:.|:
  Rat   867 KLGVTGLRCHQCEPHRFNLTVDNLQGCQACECDSLGTLPGSTCDPVSGQCLCLPHRQGRRCERCQ 931

  Fly   666 EGFYNFP----SCEDCNCDPAGVIDKFAGCGSVPVGELCKCKE-RVTGRICNECKPLYWNLNISN 725
            .|||:.|    .|..|:|..||.:...  |.|| .|: |.|:: ..||:.|::|:..|:..: ..
  Rat   932 PGFYSSPGNATGCLPCSCHTAGAVSHI--CNSV-TGQ-CSCRDPSTTGQSCHQCQDHYFGFD-PR 991

  Fly   726 TEGCEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRDGTFDLDSASLFGCK------- 783
            |..|:.|.|..:|.::  :||...:|||.||....|.:|..|..|...||..:||||.       
  Rat   992 TGRCQPCHCHLEGALN--ETCDVVTGQCFCKEFVTGSKCDICVPGASHLDVNNLFGCSKTPSQQP 1054

  Fly   784 ------DCSCDVGGSWQSVCDKISGQCKCHPRITGLACTQPLTTHFFPTLHQFQYEY-------- 834
                  ..|..:..|| |..|                         ||..|...|..        
  Rat  1055 PPRGRVQSSSAINLSW-SPPD-------------------------FPNAHWLTYTLFRDDSEIY 1093

  Fly   835 -EDGSLPSGTQVRYDYDEAAFPGFSSKGYVVFNAIQNDVRNEVNVFKSSLYRIVLRYVNPNAE-- 896
             .|...|..||  |..|.:..|..:...|:..:.:.:..|:...::|:          .|...  
  Rat  1094 TTDDQHPYYTQ--YFLDTSLSPHTAYSYYIETSNVHSSTRSIPVIYKT----------KPEGSEG 1146

  Fly   897 --NVTATISVTSDN-------------PLEVDQHVKVLLQPT----SEPQFVTVAGPLGVKPSAI 942
              |:|..|.|.||:             |:|     |.:|..|    :|| .|:..||   :.||.
  Rat  1147 HLNLTHIIPVASDSITLVWTGLSNHSGPIE-----KYVLSCTPVDHTEP-CVSYEGP---ETSAT 1202

  Fly   943 V--LDP-GRYVFTTKANKNVMLDYFVLLPAAYYEA-----------------------------G 975
            :  |.| .:|.|:.:...|....|...:.....:|                             |
  Rat  1203 IRNLVPFTQYCFSVQGCTNGSCLYSSPITVTTAQAPPQRQEPPTVWKISPTELKVEWSRPVDSNG 1267

  Fly   976 ILTR-------------------------HISNPCELGNMELCR-------------HYKYA--- 999
            ::.|                         |.::|....:..:.:             |.:||   
  Rat  1268 VIIRYELYMKRWPSTEESLVFESHGWFHSHPASPSANQSENVLQDPQVSTVLSGLDPHTEYAFRV 1332

  Fly  1000 --------------------SVEVF--SPAATPFVIGENSKP-------TNPVETYTDPE----H 1031
                                |..||  :|:.:|.      .|       ..|.|.:|..|    .
  Rat  1333 LAVNMAGSVSSAWASERTGESAPVFMAAPSVSPL------SPYSLSVSWEKPAENFTRGEIIGYK 1391

  Fly  1032 LQIVSHVG---DIPVLSGSQNELHYIVDVPRSGRYIFVIDYISDRNFPDSYYINLKLKDNPDSET 1093
            :.:||...   |:||:....  :|:                   ....|..||..:||  |....
  Rat  1392 ISMVSERSPQRDVPVMCSKL--VHF-------------------AESQDQSYIVQRLK--PYRTY 1433

  Fly  1094 SVLLYPCLYSTICRTSVNEDGMEKSFYINKEDLQPVIISADIEDGSRFPIIS-VTAIPVD-QW-- 1154
            |..:..| ||..|.||...:|.             .:.:|..:  .|.|::: ||:..|. :|  
  Rat  1434 SFTVSLC-YSVGCVTSALGEGQ-------------TLAAAPAQ--LRSPMVTGVTSTTVHIRWLP 1482

  Fly  1155 SIDYINPSPVCVIHDQQCATPKFRSVPDSKKIEF---------ETDHEDRIATNKPPYASLDERV 1210
            ..:...|.|:..:..::...|. .:...:|...|         .|.|.|.|......:..:.|.:
  Rat  1483 PAEVNGPPPLYRLERRESFLPA-ATAARTKGTRFMGDGYCRFPRTAHPDFIGIKASFWTRVPEGL 1546

  Fly  1211 KL--VHLDSQNEATIVIESKVDATKPNLFVILVKYYQP---SHPKYQVYYTLTAG--KNQY-DGK 1267
            .|  :|.|:|.|               .|.:.:|..:|   .:|:..:....||.  ..|| ||:
  Rat  1547 ILLALHPDNQEE---------------YFALQLKSGRPYFLYNPQGSLVEVTTADDHSQQYSDGQ 1596

  Fly  1268 F-DIQHCPSSSGCRGVIRPAGEGSFEIDDEFKFTITTDRSQSVWLDYLVVVPLKQYNDDLLVEET 1331
            : :|.          .||....|...:|:::     ||.|.|:             |...:   |
  Rat  1597 WHEIT----------AIRHQSFGQITLDEQY-----TDSSASL-------------NGSSV---T 1630

  Fly  1332 FDQTKEFIQNCGHDHF------HITHNASDFCKKSVFSLTADYNSGA-LPCNCDYAGSTSFECHP 1389
            ...|:.|:......|.      .|.......|.|.|..|.....||. ||  .|:..|..     
  Rat  1631 GGYTRLFVGGLPQGHTILQKRPEIVRRGFVGCLKDVSILKGSSPSGTWLP--LDWQSSEE----- 1688

  Fly  1390 FGGQCQCKPNVIERTCGACRSRYYGFPDCKPCKCPNSAMCEPTTGECMCPPNVIGDLCEKCAPNT 1454
                   :.||           ::.:..|            ||            ||.|......
  Rat  1689 -------QVNV-----------HHSWEGC------------PT------------DLEEGVQFLG 1711

  Fly  1455 YGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQNIEG---RACDVCSNGYFNFPHCEQCSC 1516
            .||.::......|.....|:. ..|.|..||......|.||   .|.:: .:|..:|    |.:.
  Rat  1712 AGFLELRSDTFHAAKDFEISL-KFQTDQLNGLLLFIHNTEGLDFLAMEL-KSGLLSF----QLNS 1770

  Fly  1517 HKPGTELEVCDKIDGACFCKKNVVGRDCDQCVDGTYNLQESNPDGCTTCFCFGKTSRCDSAYLRV 1581
            .:..|.:||             .:||  ..| ||.:|               ..|.|.:.:.:.|
  Rat  1771 SRILTRVEV-------------RLGR--THC-DGKWN---------------RVTIRREGSMVSV 1804

  Fly  1582 YNVSLLKHVS--------ITTPEFHEESIKFDMWPVPAD-EILLNETTLKADF--TLREVNDERP 1635
            ....|.|..|        :|:|.:        :..:|.: :......||:..|  .::||...|.
  Rat  1805 GVNELTKSTSRAGDQPPLLTSPVY--------LGGIPQELQASYRHLTLEQGFRGCVKEVAFTRG 1861

  Fly  1636 AYFGVL-----------DYLLNQNNHISAYGGD--LAYTLHFTSGFDGKYIVAPDVILFSEHNAL 1687
            |...:.           |..|:.::.::..|.|  |.|.....|.::..  :.|    |:|:...
  Rat  1862 AVVNLASVSSRAVRVNQDGCLSSDSTVNCGGNDSILVYRGSRQSVYESG--LQP----FTEYLYR 1920

  Fly  1688 VHTSYEQPSRNEPFTNRVNI--------VESNFQTISGKPVSRADFMMVLRDLKVIFIRANYW-E 1743
            |..|::..|.:..::....:        ..|..|:|:|..|..|                  | |
  Rat  1921 VTASHKGGSVSSDWSRGRTLGSAPHSVPTPSRAQSINGYSVEVA------------------WNE 1967

  Fly  1744 QTLVTHLSDVYLTLA-DEDADGTGEYQFLAVERCSCPPGYSGHSCE----DCAPGYYRDPSG--P 1801
            ..:|..:.:.|:..| .||               |..|.....|.|    |...|..   :|  |
  Rat  1968 PAMVKGVLEKYILKAYSED---------------SAQPHMPSASTEFNNTDIRTGIL---TGLHP 2014

  Fly  1802 YGGYCIPCECNGHSETCDCATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICACPLPFD 1866
            :..|.:....        |:...|::..........:..............|........| |..
  Rat  2015 FHSYAVTLTA--------CSRAGCTESSRALSISTPQEAPQEVQAPVAEALPNSLSFFWSP-PRQ 2070

  Fly  1867 SNNFATSCEISESGDQIHCECKPGYTGPRCESCANGFYGEPESIGQVCKPCECSGN--------- 1922
            :|...|...:...|..::......||    .:....|.....::| .|....|:.:         
  Rat  2071 ANGIITQYSLYMDGRLVYTGKGQNYT----VTDLRVFTAYEITVG-ACTRAGCTNSSRVILHTAQ 2130

  Fly  1923 -----INPEDQGSCDTRTGE----------------CLRCLNNT---------FGAACNL----- 1952
                 ::|......|:||..                .|..||.|         :.:..||     
  Rat  2131 LPPERVDPPVLAILDSRTVHIQWKQPRQLNGILERYILYTLNPTHNSTVWDVVYNSTENLQTHLL 2195

  Fly  1953 --CAPG-FYGDAIKLKNCQSCDCDDLGTQTCDPFVGVC--TCHENVIGDRCDRCKPDHYGFESGV 2012
              .:|| .|  .|||..|....|     .|.:|...:.  |..|.|...|.....||.:      
  Rat  2196 YHLSPGCLY--LIKLGACTGGGC-----TTSEPSQALMDETVPEGVPAPRAHSHSPDSF------ 2247

  Fly  2013 GCRACDCGAASNSTQCDPHTGHCACKSGVTGRQCDRCAVDHWKYEKDGCTPCNCNQGYSRGFGCN 2077
                       |.:..:|  ||   .:||         :..::...||....|.::.....:|.:
  Rat  2248 -----------NISWTEP--GH---PNGV---------ITTYELYLDGTLIHNSSELSCHAYGFD 2287

  Fly  2078 PN----------TGK-CQCLPGVIGDRCDACPNRWV--LIKDEGCQECNNCHHALLDVTDRMRYQ 2129
            |.          |.| |...|.|.....:|.|...|  .:|.||.:|......|......|:.| 
  Rat  2288 PGSLHTFQVQACTAKGCALGPLVENRTLEAPPEGTVNLFVKPEGSREAAVRWDAPPHPNGRLTY- 2351

  Fly  2130 IDSVLEDFNSVTLAFFTSQKLNYYDQLADELEPKVKLLDPNSVDLSPSKKANSELESD------- 2187
              |||     :|..|       |.||..|           |...||.:|..:|. :.|       
  Rat  2352 --SVL-----ITGNF-------YADQAGD-----------NYTLLSSTKTVHSS-KGDRLWVLVD 2390

  Fly  2188 ----AKSYAKQVNQTLANAFDIRERSSTTLGNITVAYDEAVKSADQAKEAIASVEALSKNLEAAA 2248
                ..:|..|||.:.:....:.:|.|             |:....|.:.:     ||..|.||.
  Rat  2391 RLVPCSNYTVQVNASNSQGSVLSDRVS-------------VEMPPGAPDGL-----LSPRLAAAT 2437

  Fly  2249 STKIDAALE-------------QAQHILGQINGTSIELTPNEQVLEKARKLYEEVNTLVLPIKAQ 2300
            .|.:.....             |.|..........:||.|....|     |..|| |.:.|....
  Rat  2438 PTSLQVVWSTPARNNAPGSPRYQLQMRPDPSTRGLLELFPIPSAL-----LSYEV-TGLQPFTVY 2496

  Fly  2301 NKSLNALKNDIGEFSD-----HLED--------LFN---------WSEASQAKSADVERRNVANQ 2343
            ...|.|.......:||     ..||        :.|         |.:.::...|      :.:.
  Rat  2497 EFRLVATNGFGSAYSDWTPLMTTEDKPGPMDAPVLNVKAGMMSVAWRKPTECNGA------ITHY 2555

  Fly  2344 KAFDNSK-FDTVS---------------EQKLQAEK------NIKDAGNFL---------INGDL 2377
            ..:.:.: :.|||               ..:.|.|.      ::..|...:         |.|..
  Rat  2556 NIYQHGRLYLTVSGGVTNCTVVHLRPHTAYQFQIEACSSKGCSMSPASETVWTLPGTPEGIPGPE 2620

  Fly  2378 TLNQINQKLDNLRDALNELNSFNKNVDEELPVREDQHKEADALTDQAEQKAAELAIKAQDLAAQY 2442
            .|.....|:.........|:...:|:..|..|:|             :::...|.|..:..|.::
  Rat  2621 LLPYTPTKIIVSWQPPTHLDGLVENITIERRVKE-------------QEEVRSLVILPRSQAVRF 2672

  Fly  2443 TDMTASAEPAIKAATAY---------------SGIVEAVEAAQK-----------LSQDAISAAG 2481
            .|    .:||::..|.|               |..||......:           |..||:....
  Rat  2673 ID----NDPALRPWTHYEYRVLGSTLNGGTNSSAWVEVTTRPSRPSGVQPPTVHVLGPDAVEVTW 2733

  Fly  2482 NATDKTDG--IEERAHLAD-----TGSTDLLQRARQSLQKVQDDLEPRLNASAGKVQ-------- 2531
            .|....:|  :.....:.|     |..|..:      |..:...|.|..|.|...|.        
  Rat  2734 KAPLIRNGDIVSYEIRMPDPLIEITNVTSFV------LSHLVKHLIPFTNYSVSIVACSGGHGYL 2792

  Fly  2532 ---KISAVNNATEHQL--KDINKLIDQLPAESQRDM-WK-NSNANASD-ALEILKNVLEILEPVS 2588
               ..|....||.|..  :::..|...|..:|...: |: .|..|..: ..|:|:.  :|.:|::
  Rat  2793 GGCTESLPTFATTHPALPQELTPLSISLLGQSYVGISWQPPSKPNGPNLRYELLRR--KIQQPLA 2855

  Fly  2589 VQTPKELEKAH-------------GINR------------------------------------- 2603
            ...|::|...|             |::|                                     
  Rat  2856 SNPPEDLNLWHNIYSGTRRFYEDKGLSRFTTYEYKLFVHNSLGFTPSQEVTVTTLAGSPERGATV 2920

  Fly  2604 ---DLDLTNKDVSQANKQLDDVEGSVS------------------------KLSELAEDIEEQ-- 2639
               .|:.|..||........|::|.|.                        .:..||.::|.|  
  Rat  2921 TASILNHTAIDVRWKRPTFQDLQGDVEYYTLFWSSGTSVESLKIFPDVDFHVIGHLAPNVEYQVF 2985

  Fly  2640 ------QHRVGS--------------------------QSRQLGQEIENLKAQVEAARQLANS-- 2670
                  .|.:.|                          ..|.:.....|..|.:..:...||:  
  Rat  2986 LLVFNGVHAINSTVVRVTTWEEEPRGMRPPEVVIINSTAVRVIWTSPSNPNAVITESSVYANNEL 3050

  Fly  2671 IKVGV---------NFKPSTILELKTPEKTK---LLATRTNLSTYFRTTEPSGFLLYLGNDNKTA 2723
            .|.|.         :..|.||.:::....||   :.::.|.:||...|  |||..:.:..|..:.
  Rat  3051 HKAGAGAPGSFTLEDLSPFTIYDIQVEVCTKDACVKSSGTQVSTAEDT--PSGISIPIIRDITSR 3113

  Fly  2724 QKNNDFVAV----EIVNGYPIL--TIDLGNGPERIT---------------------------SD 2755
            ....|:.|.    .|:.||.:|  |..|.:..:::|                           ..
  Rat  3114 SLQIDWTAPGNPNGIILGYDVLRKTWRLCSETQKLTDKPRDELCKAVKCQYPGNVCGHTCYSPGT 3178

  Fly  2756 KYVADGRWYQAVVDRMGPNAKLTIREE-----LPNGDVV-----------EHS-KSGY----LEG 2799
            |...||..|.       |....:..||     |||...|           :|. .||:    |.|
  Rat  3179 KVCCDGLLYD-------PQPGYSCCEEKYIALLPNSTGVCCGGRQREAQPDHQCCSGHYIRILPG 3236

  Fly  2800 SQNILHVDKNSRLFVG--------------------------GY--------------------- 2817
             :.....::::|:.||                          ||                     
  Rat  3237 -EICCPDERHNRVSVGFGDACCGTMPYATSGSQVCCAGKLQDGYRRQCCGGEMVSQDFKCCGGGE 3300

  Fly  2818 --------PGI----SDF-NAPPDLTTNSFSGD--------------------IEDLKIGDESVG 2849
                    ||:    .|: |....:..::.|||                    |.:.:...:.||
  Rat  3301 EGMVYSSLPGMLCCGQDYVNMSDTICCSASSGDSKAHVRGSDPMPVRCCHTELIPESQQCCDGVG 3365

  Fly  2850 LWN---FVYGDDNDQG-ARERDVLLEKKKPVTGLRFKGNGYVQLNATSNL--KSRSSIQFSFKAD 2908
             :|   :|..|:...| |.|...:.....|.|.......|....|||:::  .||..:.   ...
  Rat  3366 -YNPVKYVCSDEISAGMATEETRVCATVCPATMRATAHCGQCDFNATTHICTVSRGPLN---PIG 3426

  Fly  2909 KDTSNGLL-----FFYGRDKH---YMSIEMIDGAIF-FNISL--GEGGGVQSGSQDRYNDNQWHK 2962
            |:|:.||.     ..:..|::   ::..::....:: :.:|:  ..|.|.....:....::....
  Rat  3427 KETAEGLCSTAEEIVHSGDENTRSFIDTDLEPSTVYEYRVSVWNSYGRGFSQSVRASTREDVPQG 3491

  Fly  2963 VQAERENRNGLLKVDDIVI------SRTNAPLEADLELPKLRRLYFGGHPRRLNTSISLQP---- 3017
            |.|.|..|.|  ..:|::.      :::|.|:...:.|...|..:.|......:|. .:||    
  Rat  3492 VTAPRWARTG--NHEDVIFLTWKEPTQSNGPITHYILLRDGRERFQGAALSFTDTQ-GIQPLQEY 3553

  Fly  3018 -------NFDGCIDNVVI----NQGVVD----------------------------LTEY---VT 3040
                   ...||.|:..:    .:||::                            :.||   :.
  Rat  3554 SYQLKACTAAGCADSCKVVATATRGVLESVPPPNITAQSPETLHLSWSVPEKRNDAIKEYQLWLD 3618

  Fly  3041 GGGV--EEGCSAKFSTVVSYAPH-EYGF-----LRMNNVSSDNNL----------------HVVL 3081
            |.|:  .:....:..||....|| .|.|     ..:...||:.::                |:::
  Rat  3619 GKGLIYTDTNDRRQHTVTGLQPHTNYSFTLSACTSVGCTSSEPSVGQTLQAAPQGVWVTPRHIII 3683

  Fly  3082 HFKTTQ--------PNGV------------LFYAANHDQSSTIGLSLQDGLLKLNSM-------- 3118
            :..|.:        ||||            |......|||.|      |..|:.||.        
  Rat  3684 NSTTVELYWNPPERPNGVISQYRLRRNGSLLLVGGRDDQSFT------DKNLEPNSRYIYTLEAR 3742

  Fly  3119 ---GSQLVIDDRILNDGEDHVV-----TVQHTQGELRLTVDDVDNKRLGSPQP------------ 3163
               ||.|         .|:::|     |.:.......:||...|:..:..|.|            
  Rat  3743 TGGGSSL---------SEEYLVQMPMWTPEDVHPPCNVTVLGSDSIFVAWPAPGILLPKIPVEYS 3798

  Fly  3164 LILEGGDI----FFAGLPDN-YRTPRNALASLAYF------------VGCISDVTVNEEIINFAN 3211
            ::|.||::    |..||..: |      |.:||.|            |||               
  Rat  3799 ILLSGGNMMLLTFSVGLRQSAY------LKNLAPFTQYEIRIQACQEVGC--------------- 3842

  Fly  3212 SAEKKNGNINGCPP--HVLAYEPSLV----PSYYPSGDNEVESPWSNADTLPPLKPD--IESTLP 3268
                      |..|  ||...|.:.|    |.....|.:.:|..|:     ||.:|:  |.|.:.
  Rat  3843 ----------GVSPGTHVRTLEAAPVGLMPPLLKALGSHCIEVKWT-----PPTRPNGIITSYVI 3892

  Fly  3269 PTTPTTTTTTTTT-TTSTTTTSTTTTTTTPSPIVIDEEKEIEAKTPQKILTTRPPAKLNLPSDER 3332
            ...|..|...:.. ..|......|..|.|..|..:.|.: :.|...:.::               
  Rat  3893 HRRPADTEEESLLFVWSEGALEFTDDTDTLRPFTLYEYR-VRAWNSKGVV--------------- 3941

  Fly  3333 CKLPEQPNFDVDFTEAGYRFYGLREQRLQINSLP---VKVRRHHDIGISF-RTERPNGLL----- 3388
                :.|...|...||            ....||   |:|...|.:.::: ..|.||||:     
  Rat  3942 ----DSPWSSVQTLEA------------PPQDLPAPWVQVTSAHSVLLNWTEPEAPNGLISQYHV 3990

  Fly  3389 IYAGSKQRDDFIA-------------------VYLLDGRVTYEIRVGAQLQA-KITTEAELNDGT 3433
            ||   ::|.|..|                   ::.|:...||.|.|.|..:| |:::       .
  Rat  3991 IY---QERPDEAAPGSSTVHAFTVKGSSRQAHLFGLEPFTTYHIGVAAVNRAGKVSS-------P 4045

  Fly  3434 WHTVEVVRTQRKVSLLIDKLEQPGSVDLNAERSAP-----------VLAVELPIYLGGVNKFLES 3487
            |..::.:.:.....:.....::.|...|..:.|.|           |.:..||.|.|...:||..
  Rat  4046 WTLIKTLESAPSGLMNFTAEQREGGRALLLQWSEPVRTNGVIKAYNVFSDGLPEYSGLGRQFLFR 4110

  Fly  3488 EVKNLTDF--KTEVPYFNGCLKNIKFDAMDLETPPEEFGVVPCSEQVERGLFFNNQKAFVKIFDH 3550
            .:...|.:  ..|.....||..::.......|.||:. .:.|..:.||                 
  Rat  4111 RLAPFTLYILTLEACTAAGCAHSVPQTLWTEEAPPDS-QMAPTIQSVE----------------- 4157

  Fly  3551 FDVGTEMKISFDFRPRDPNGLLFSVHGKNSYAILELVDNTLY------FTVKTDLKNIVSTNYKL 3609
               .|.:::.:. :|.:|||.:..         .|::...|.      .||:.| :|.|.|.|..
  Rat  4158 ---PTSVRLHWS-QPANPNGKIIR---------YEVIRRRLQGEDWGNRTVQAD-ENTVFTEYNT 4208

  Fly  3610 PNNESFC 3616
            ..|...|
  Rat  4209 EGNGWVC 4215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanANP_476617.1 LamNT 18..271 CDD:214532 57/277 (21%)
EGF_Lam 272..>314 CDD:238012 19/43 (44%)
EGF_Lam 332..389 CDD:238012 26/63 (41%)
EGF_Lam 402..443 CDD:238012 11/48 (23%)
Laminin_EGF 448..497 CDD:395007 19/55 (35%)
Laminin_EGF 495..543 CDD:395007 15/49 (31%)
Laminin_EGF 541..589 CDD:395007 20/53 (38%)
Laminin_EGF 587..634 CDD:395007 16/54 (30%)
Laminin_EGF 632..679 CDD:395007 23/52 (44%)
Laminin_EGF 677..729 CDD:395007 16/52 (31%)
Laminin_EGF 732..782 CDD:395007 18/49 (37%)
EGF_Lam 785..828 CDD:238012 7/42 (17%)
CBM6-CBM35-CBM36_like 831..966 CDD:271143 36/167 (22%)
Laminin_EGF 1375..1423 CDD:395007 5/47 (11%)
EGF_Lam 1420..1457 CDD:238012 5/36 (14%)
Laminin_EGF 1466..1516 CDD:395007 13/52 (25%)
Laminin_EGF 1514..1562 CDD:395007 9/47 (19%)
LamB 1632..1760 CDD:214597 26/150 (17%)
Laminin_EGF <1775..1801 CDD:395007 7/31 (23%)
EGF_Lam 1808..1851 CDD:238012 2/42 (5%)
EGF_Lam 1859..1907 CDD:214543 8/47 (17%)
EGF_Lam 1916..1968 CDD:238012 17/98 (17%)
EGF_Lam 1969..2015 CDD:238012 9/47 (19%)
EGF_Lam 2016..>2054 CDD:238012 6/37 (16%)
EGF_Lam 2063..>2097 CDD:238012 8/44 (18%)
Laminin_I 2134..2385 CDD:310534 56/327 (17%)
SMC_prok_B 2356..>2705 CDD:274008 84/537 (16%)
Laminin_II 2566..2700 CDD:368703 37/259 (14%)
LamG 2674..2843 CDD:238058 52/314 (17%)
LamG 2878..3029 CDD:238058 31/184 (17%)
LamG 3078..3205 CDD:214598 40/191 (21%)
LamG 3349..3512 CDD:238058 39/204 (19%)
LamG 3535..3689 CDD:238058 16/88 (18%)
Ush2aNP_001289148.1 LamGL 144..279 CDD:214722 6/30 (20%)
Laminin_N 312..512 CDD:470680 46/213 (22%)
Laminin_EGF 514..561 CDD:395007 20/51 (39%)
EGF_Lam 570..635 CDD:238012 30/75 (40%)
EGF_Lam 637..688 CDD:238012 11/50 (22%)
Laminin_EGF 690..740 CDD:395007 17/50 (34%)
EGF_Lam 742..787 CDD:238012 13/44 (30%)
Laminin_EGF 791..840 CDD:395007 17/48 (35%)
Laminin_EGF 843..893 CDD:395007 14/49 (29%)
EGF_Lam 895..944 CDD:238012 21/48 (44%)
EGF_Lam 946..996 CDD:238012 16/54 (30%)
EGF_Lam 997..>1034 CDD:238012 13/38 (34%)
FN3 1054..1127 CDD:473895 17/100 (17%)
FN3 1152..1234 CDD:238020 22/90 (24%)
FN3 1238..1350 CDD:238020 7/111 (6%)
FN3 1361..1444 CDD:214495 23/112 (21%)
LamG 1512..1668 CDD:238058 39/201 (19%)
LamG 1706..1856 CDD:238058 36/194 (19%)
FN3 1802..>2117 CDD:442628 62/378 (16%)
FN3 2133..2223 CDD:238020 20/96 (21%)
FN3 2227..2749 CDD:442628 112/626 (18%)
FN3 <2674..3048 CDD:442628 58/385 (15%)
FN3 <3453..3756 CDD:442628 53/320 (17%)
FN3 3762..3852 CDD:238020 23/120 (19%)
FN3 <3876..4330 CDD:442628 80/419 (19%)
FN3 <4186..>4558 CDD:442628 9/31 (29%)
FN3 <4486..>4755 CDD:442628
fn3 4724..4798 CDD:394996
FN3 4815..4916 CDD:238020
Blue background indicates that the domain is not in the aligned region.

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