Sequence 1: | NP_476617.1 | Gene: | LanA / 38723 | FlyBaseID: | FBgn0002526 | Length: | 3712 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_775382.1 | Gene: | lamb1a / 286830 | ZFINID: | ZDB-GENE-021226-1 | Length: | 1785 | Species: | Danio rerio |
Alignment Length: | 2844 | Identity: | 583/2844 - (20%) |
---|---|---|---|
Similarity: | 865/2844 - (30%) | Gaps: | 1325/2844 - (46%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 PPYFNLATGR--KIYATATCGQDTDGPELYCKLVGANTEHDHIDYSVIQGQ----VCD----YCD 80
Fly 81 PTVPERNHPPENAI-----DGTEAWWQSPPLSRGMKFNEVNLTINFEQEFHVAYLFIRMGNSPRP 140
Fly 141 GLWTLEKSTDYGKTWTPWQHFSDTPADCETYFGKDTYKPITRDDDVICTTEYSKIVPLENGEIPV 205
Fly 206 MLLN-----ERPSSTNYFNSTVLQEWTRATNVRIRLLRTKNLLGHLMSVARQDPTVTRRYFYSIK 265
Fly 266 DISIGGRCMCNGHADTC-DVKDPKSPVRILA---CRCQHHTCGIQCNECCPGFEQKKWR----QN 322
Fly 323 TNARPFNCEPCNCHGHSNECKYDEEVNRKGLSLDIHGHYDGGGVCQNCQHNTVGINCNKCKPKYY 387
Fly 388 RPKGKHWNETDVCSPCQCDYFFSTGHCEEETGNCECRAAFQPPSCDSCAYGYYGYPNCRECECNL 452
Fly 453 NGTNGYHCEAESGQQCPCKINFAGAYCKQCAEGYYGFPECKACECNKIGSITNDCNVTTGECKCL 517
Fly 518 TNFGGDNCERCKHGYFNYPTCSYCDCDNQGTESEICNKQSGQCICREGFGGPRCDQCLPGFYNYP 582
Fly 583 D----CKPCNCSSTGSSAITCDNTGKCNCLNNFAGKQCTLCTAGYYSYPDCLPCHCDSHGSQGVS 643
Fly 644 CNSDGQCLCQPNFDGRQCDSCKEGFYNFPSCEDCNCDPAGVIDKFAGCGSVPVGELCKCKERVTG 708
Fly 709 RICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRDGTFD 773
Fly 774 LDSASLFGCKDCSCDVGGSWQSVCDKISGQCKCHPRITGLACTQPLTTHFFPTLHQFQYEYEDGS 838
Fly 839 L-PSGTQVRYDYDEAAFPGFSSKGYV-----VFNAIQNDVRNEVNVFKSSLYRIVLRYVNPNAEN 897
Fly 898 VTATISVTSDNPLEVDQHVKVLLQPTSEPQFVTVAGPLGVKPSAIVLDPGRYVFTTKANKNVMLD 962
Fly 963 YFVLLPAAYYEAGILTRHISNPCELGNMELCRHYKYASVEVFSPAATPFVIGENSKPTNPVETYT 1027
Fly 1028 DPEHLQIVSHVGDIPVLSGSQNELHYIVDVPRSGRYIFVIDYISDRNFPDSYYINLKLKDNPDSE 1092
Fly 1093 TSVLLYPCLYSTICRTSVNEDGMEKSFYINKEDLQPVIISADIEDGSRFPIISVTAIPVDQWSID 1157
Fly 1158 YINPSPVCVIHDQQCATPKFRSVPDSKKIEFETDHEDRIATNKPPYASLDERVKLVHLDSQNEAT 1222
Fly 1223 IVIESKVDATKPNLFVILVKYYQPSHPKYQVYYTLTAGKNQYDGKFDIQHCP-----SSSGCRG- 1281
Fly 1282 --VIRPAGEGSFEIDDEFKFTITTDRSQSVWLDYLVVVPLKQYNDDLLVEETFDQTKEFIQNCGH 1344
Fly 1345 DHFHITHNASDFCKKSVFSLTADYNSGALPCNCDYAGSTSFECHPFGGQCQCKPNVIERTCGACR 1409
Fly 1410 SRYYGFPDCKPCKCPNSAMCEPTTGECMCPPNVIGDLCEKCAPNTYGFHQVIGCEECACNPMGIA 1474
Fly 1475 NGNSQCDLFNGTCECRQNIEGRACDVCSNGYFNFPHCEQCSCHKPGTELEVCDKIDGACFCKKNV 1539
Fly 1540 VGRDCDQCVDGTYNLQESNPDGCTTCFCFGKTSRCDSAYLRVYNVSLLKHVSITTPEFHEESIKF 1604
Fly 1605 DMWPVPADEILLNETTLKADFTLREVNDERPAYFGVLDYLLNQNNHISAYGGDLAYTLHFTSGFD 1669
Fly 1670 GKYIVAPDVILFSEHNALVHTSYEQPSRNEPFTNRVNIVESNFQTISGKPVSRADFMMVLRDLKV 1734
Fly 1735 IFIRANYWEQTLVTHLSDVYLTLADEDADGTGEYQFLAVERCSCPPGYSGHSCEDCAPGYYRDPS 1799
Fly 1800 GPYGGYCIPCECNGHSETCDCATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICACP-L 1863
Fly 1864 PFDSNNFATSCEISESGDQIHCECKPGYTGPRCESCANGFYGEPESIGQVCKPCECSGNINPEDQ 1928
Fly 1929 GSCDTRTGECLRCLNNTFGAACNLCAPGFYGDAIKLKNCQSCDCDDLGTQ----------TCDPF 1983
Fly 1984 VGVCTCHENVIGDRCDRCKPDHYGFESGVGCRACDCGA-ASNSTQCDPHTGHCACKSGVTGRQCD 2047
Fly 2048 RCAVDHWKYEKDGCTPCNCNQGYSRGFG---CNPNTGKCQCLPGVIGDRCDACPNRWVLIKDEG- 2108
Fly 2109 ---CQECNNCH--------------HALLDVTDRMR-------YQ--IDSVLEDFNSVTLAFFTS 2147
Fly 2148 QKLNYYDQLADELEPKVKLLDPNSVDLSPSKKANSELESD----------AKSYAKQVNQTLANA 2202
Fly 2203 FDIRERSSTTLGNITVAYDEAVKSAD--QAKEAIASVEALSKNLE--AAASTKIDAALEQAQHIL 2263
Fly 2264 GQINGTSIELTPNEQVLEKARKLYEEVNTLVLPIKAQNKSLNALKNDIGEFSDHLE--DLFNWSE 2326
Fly 2327 ASQAKSADVERRNVAN---------------------------------QKAFDNSKFD------ 2352
Fly 2353 ---------TVSEQKLQAEKNIKDAGNFLINGDLTLNQINQKLDNLRDALNELNSF--------- 2399
Fly 2400 ------NKNVDEELP--------VREDQHKEADALTDQAE---QKAAELAIKAQDLAAQYTDMTA 2447
Fly 2448 SAEPAIKAATAYSGIVEAVE------------AAQKLSQDAISAAGNATDKTDGIEERAHLADTG 2500
Fly 2501 STDL-LQRARQSLQKVQDDL----EPRLNASAGKVQKISAVNNATEHQLKDINKLIDQLP----- 2555
Fly 2556 --------------------------AESQRDMWKNSNANASDALEILKNVLEILEPVSVQTPKE 2594
Fly 2595 LEKAHGINRDLDLTNKDVSQANKQLDDVEGSVSKLSELAEDIEEQQHRV 2643 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanA | NP_476617.1 | LamNT | 18..271 | CDD:214532 | 73/264 (28%) |
EGF_Lam | 272..>314 | CDD:238012 | 15/45 (33%) | ||
EGF_Lam | 332..389 | CDD:238012 | 23/56 (41%) | ||
EGF_Lam | 402..443 | CDD:238012 | 4/40 (10%) | ||
EGF_Lam | 448..491 | CDD:238012 | 0/42 (0%) | ||
Laminin_EGF | 495..543 | CDD:278482 | 5/47 (11%) | ||
Laminin_EGF | 541..589 | CDD:278482 | 16/51 (31%) | ||
Laminin_EGF | 587..634 | CDD:278482 | 6/46 (13%) | ||
EGF_Lam | 631..673 | CDD:238012 | 4/41 (10%) | ||
Laminin_EGF | 677..729 | CDD:278482 | 14/51 (27%) | ||
Laminin_EGF | 732..782 | CDD:278482 | 2/49 (4%) | ||
EGF_Lam | 785..828 | CDD:238012 | 15/42 (36%) | ||
CBM6-CBM35-CBM36_like | 831..966 | CDD:271143 | 19/140 (14%) | ||
Laminin_EGF | 1375..1423 | CDD:278482 | 18/47 (38%) | ||
EGF_Lam | 1420..1457 | CDD:238012 | 5/36 (14%) | ||
Laminin_EGF | 1466..1516 | CDD:278482 | 20/49 (41%) | ||
Laminin_EGF | 1514..1562 | CDD:278482 | 0/47 (0%) | ||
LamB | 1632..1760 | CDD:214597 | 0/127 (0%) | ||
Laminin_EGF | <1775..1801 | CDD:278482 | 0/25 (0%) | ||
EGF_Lam | 1808..1851 | CDD:238012 | 23/42 (55%) | ||
EGF_Lam | 1859..1907 | CDD:214543 | 21/48 (44%) | ||
EGF_Lam | 1916..1968 | CDD:238012 | 24/51 (47%) | ||
EGF_Lam | 1969..2015 | CDD:238012 | 20/55 (36%) | ||
EGF_Lam | 2016..>2054 | CDD:238012 | 14/38 (37%) | ||
EGF_Lam | 2063..>2097 | CDD:238012 | 16/36 (44%) | ||
Laminin_I | 2129..2385 | CDD:283627 | 67/321 (21%) | ||
Tar | 2278..2662 | CDD:223910 | 107/490 (22%) | ||
Laminin_II | 2566..2700 | CDD:283628 | 23/78 (29%) | ||
LamG | 2674..2843 | CDD:238058 | |||
LamG | 2878..3029 | CDD:238058 | |||
LamG | 3078..3205 | CDD:214598 | |||
LamG | 3349..3512 | CDD:238058 | |||
LamG | 3535..3689 | CDD:238058 | |||
lamb1a | NP_775382.1 | Laminin_N | 40..266 | CDD:278484 | 71/257 (28%) |
EGF_Lam | 268..320 | CDD:238012 | 16/51 (31%) | ||
Laminin_EGF | <353..382 | CDD:278482 | 15/35 (43%) | ||
EGF_Lam | 394..452 | CDD:238012 | 22/186 (12%) | ||
EGF_Lam | 453..504 | CDD:238012 | 26/196 (13%) | ||
EGF_Lam | 505..548 | CDD:238012 | 15/42 (36%) | ||
CBM6-CBM35-CBM36_like | 552..>612 | CDD:301364 | 14/64 (22%) | ||
EGF_Lam | 769..814 | CDD:214543 | 24/87 (28%) | ||
Laminin_EGF | 817..865 | CDD:278482 | 22/344 (6%) | ||
EGF_Lam | 862..907 | CDD:238012 | 24/44 (55%) | ||
Laminin_EGF | <934..969 | CDD:278482 | 16/34 (47%) | ||
Laminin_EGF | 972..1018 | CDD:278482 | 23/46 (50%) | ||
Laminin_EGF | 1024..1078 | CDD:278482 | 19/53 (36%) | ||
Laminin_EGF | 1081..1129 | CDD:278482 | 16/47 (34%) | ||
Laminin_EGF | 1129..>1168 | CDD:278482 | 17/46 (37%) | ||
Apolipoprotein | 1246..1393 | CDD:279749 | 43/183 (23%) | ||
SynN | 1256..>1374 | CDD:294095 | 32/150 (21%) | ||
COG1340 | 1441..1730 | CDD:224259 | 66/313 (21%) | ||
MCP_signal | 1448..1630 | CDD:304920 | 36/195 (18%) | ||
NusB_Sun | 1530..>1611 | CDD:294154 | 18/88 (20%) | ||
Uso1_p115_C | 1672..1774 | CDD:282695 | 29/128 (23%) | ||
IncA | <1697..>1774 | CDD:282066 | 24/103 (23%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |