Sequence 1: | NP_476617.1 | Gene: | LanA / 38723 | FlyBaseID: | FBgn0002526 | Length: | 3712 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017448655.1 | Gene: | Agrn / 25592 | RGDID: | 2067 | Length: | 2066 | Species: | Rattus norvegicus |
Alignment Length: | 2522 | Identity: | 479/2522 - (18%) |
---|---|---|---|
Similarity: | 731/2522 - (28%) | Gaps: | 999/2522 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 1353 ASDFCKKSVFSLTADYNSGALPCNCDYAGSTSFECHPFGGQCQCKPNVIERTCGACRSRYYGFPD 1417
Fly 1418 CKPCKCPNSAMCEPT----TGECMCPPNVIGDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNS 1478
Fly 1479 QCDLFNGTCECRQNIEGR---ACDVCSNGYFNFPH-C---------------EQCSCHKPGTELE 1524
Fly 1525 VCDKIDGACF---CKKNVVGR------------DC---DQCVDGTYNLQESNPDGCT-TCFCFGK 1570
Fly 1571 TSR---------CDSAYLRV-------YNVSLLKHVSITTPEFHEESIKFDMWPVPADEILLNET 1619
Fly 1620 TLKADFTLREVNDERPAYFGVLDYLLNQNNHIS-AYGGDLAYTLHFTSGFDGKYIVAPDVILFSE 1683
Fly 1684 HNALVHTSYEQPSRNEPFTNRVNIVESNFQTI-SG--KPVSRADFMMVLRDLKVIFIRANYWEQT 1745
Fly 1746 LVTHLSDVYLTLADE-------DADGTGEYQF-----LAVERCSCPP----------GYSGHSCE 1788
Fly 1789 DCAPGYYRDPSGPYGGYCIPCECN---------------GHSETCD---------CATG--ICSK 1827
Fly 1828 CQHGTEGDHCERCVSGYYGNATNGTPGDCMICACPLPFDSNNFATSCEISESGDQIHCECKPGYT 1892
Fly 1893 GPRCE--SCANGFYGEPESIGQVCKP--CECSGNINPEDQGS----CDTRTGECLR---CLNN-- 1944
Fly 1945 TFGAACNL----------------------------------CAPGFYG---------DAIKLKN 1966
Fly 1967 CQS-CDCDDLGTQ--TCDPFVGVCTCHENVIGDRCDRCKPDHYGFESGV-----GCRACDC---G 2020
Fly 2021 AASNSTQCDPHTGHCACKSGVTGRQCDRC----AVDHWKYEKDGCTPCNCNQGYSR-GFGCNPNT 2080
Fly 2081 GKCQCLPGVIGDRCDACP--NRWVLIKDEGCQECNNCHHALLDVTDRMRYQIDSVLEDFNSVTL- 2142
Fly 2143 AFFTSQKLNYYDQLADELEPKVKLLDPNSVDLSPSKKANSELESDAKSYAKQVNQTLANAFDIRE 2207
Fly 2208 RSSTTLGNITVAYDEAVKSADQAKEAIASVEALSKNLEAAASTKIDAALEQAQHILGQINGT-SI 2271
Fly 2272 ELTPNEQV-------LEKARKLYEEVNTLVLPIKAQNKSLNALKNDIGEFSDHLEDLFNWSEASQ 2329
Fly 2330 AKSADVERRNVANQKAFDN-SKFDTVSEQKLQAEKNIKDAGNFLINGDLTLNQINQKLDNLRDAL 2393
Fly 2394 NELNSFNKNVDEELPVREDQHKEADALTDQAEQKAAELAIKAQDLAAQYTDMTASAEPAIKAATA 2458
Fly 2459 YSGIVEAVEAAQKLSQDAISAAGNATDKTDGIEERAHLAD------------TGSTDLLQRARQS 2511
Fly 2512 LQKVQDDLEPRLNASAGKVQKISAVNNATEHQLKDINKLIDQLPAESQRDMWKNSNANASDALEI 2576
Fly 2577 LKNVLEILEPVSVQTPKELEKAHGINRDLDLTNKD------VSQANKQLDDVEGSVSKLSELAED 2635
Fly 2636 IEEQQHRVGSQSRQLGQEIENLKAQVEAARQLANSIKVGVN------FKPSTILELKTPEKTKLL 2694
Fly 2695 ATRT-NLSTYFRTTEPSGFLLYLGNDNKTAQKNNDFVAVEIVNGYPILTIDLGNGPERITSDKYV 2758
Fly 2759 ADGRWYQAVVDRMGPNAKLTIREELPNGDVVEHSKSGYLEGSQNILHVDKNSRLFVGGYP----- 2818
Fly 2819 --------GISDFNAPPDLTTNSFSGDIEDLKIGDESVGL--WNFVYGDDNDQG----------- 2862
Fly 2863 --------ARERDVLL-------------EKKKP------------------------------- 2875
Fly 2876 -------VTGLR-----FKGNGYVQLNA----TSNLKSRSSIQFSFKADKDTSNGLLFFYGRDK- 2923
Fly 2924 ---HYMSIEMIDGAIFFNISLGEGGGVQSGSQDRYNDNQWHKVQAERENRNGLLKVDDIVISRTN 2985
Fly 2986 APLEADLELPKLRR-----------LYFGGHPRRLNTSISLQPNFDGCIDNVVINQGVVDLTEYV 3039
Fly 3040 TGGGVEEGCSAKFSTVVSYAPHEYGFLRMNNVSSDNNLHVVLHFKTTQPNGVLFYAANHDQSSTI 3104
Fly 3105 GLSLQDGLLKLNSM-GSQLVIDDRILNDGE-----DHVVTVQHTQGELRLTVDDVDNKRLGSPQP 3163
Fly 3164 LILEGGDIFFAGLPDNYRTPRNALASLAYFVGC---ISDVTVNEEIINFANSAEKKNGNINGCPP 3225
Fly 3226 HVLAYEPSLVPSYYPSGDNEVESPWSNADTLPPLKPDIESTLPPTTPTTTTTTTTTTTSTTTTST 3290
Fly 3291 TTTTTTPSPIVIDEEKEIEAKTPQKILTTRPPAKLNLPSDERCKLPEQPNFDVDFTEAGYRFYGL 3355
Fly 3356 REQRLQINSLPVKVRRHHDIGISFRTERPNGLLIYAG-SKQRDDFIAVYLLDGRVTYEIRVGAQL 3419
Fly 3420 QAKITTEAELNDGTWHTVEVVRTQRKVSLLIDKLEQP--GSVDLNAERSAPVLAVELPIYLGGVN 3482
Fly 3483 KFLESEVKNLTDFKTEVPYFNGCLKNIKFDAMDLE------TPPEEFGVVPC 3528 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanA | NP_476617.1 | LamNT | 18..271 | CDD:214532 | |
EGF_Lam | 272..>314 | CDD:238012 | |||
EGF_Lam | 332..389 | CDD:238012 | |||
EGF_Lam | 402..443 | CDD:238012 | |||
EGF_Lam | 448..491 | CDD:238012 | |||
Laminin_EGF | 495..543 | CDD:278482 | |||
Laminin_EGF | 541..589 | CDD:278482 | |||
Laminin_EGF | 587..634 | CDD:278482 | |||
EGF_Lam | 631..673 | CDD:238012 | |||
Laminin_EGF | 677..729 | CDD:278482 | |||
Laminin_EGF | 732..782 | CDD:278482 | |||
EGF_Lam | 785..828 | CDD:238012 | |||
CBM6-CBM35-CBM36_like | 831..966 | CDD:271143 | |||
Laminin_EGF | 1375..1423 | CDD:278482 | 13/47 (28%) | ||
EGF_Lam | 1420..1457 | CDD:238012 | 10/40 (25%) | ||
Laminin_EGF | 1466..1516 | CDD:278482 | 14/68 (21%) | ||
Laminin_EGF | 1514..1562 | CDD:278482 | 12/65 (18%) | ||
LamB | 1632..1760 | CDD:214597 | 19/131 (15%) | ||
Laminin_EGF | <1775..1801 | CDD:278482 | 7/35 (20%) | ||
EGF_Lam | 1808..1851 | CDD:238012 | 13/68 (19%) | ||
EGF_Lam | 1859..1907 | CDD:214543 | 12/49 (24%) | ||
EGF_Lam | 1916..1968 | CDD:238012 | 18/105 (17%) | ||
EGF_Lam | 1969..2015 | CDD:238012 | 22/53 (42%) | ||
EGF_Lam | 2016..>2054 | CDD:238012 | 14/44 (32%) | ||
EGF_Lam | 2063..>2097 | CDD:238012 | 7/34 (21%) | ||
Laminin_I | 2129..2385 | CDD:283627 | 49/265 (18%) | ||
Tar | 2278..2662 | CDD:223910 | 58/409 (14%) | ||
Laminin_II | 2566..2700 | CDD:283628 | 24/146 (16%) | ||
LamG | 2674..2843 | CDD:238058 | 54/188 (29%) | ||
LamG | 2878..3029 | CDD:238058 | 39/174 (22%) | ||
LamG | 3078..3205 | CDD:214598 | 22/135 (16%) | ||
LamG | 3349..3512 | CDD:238058 | 41/165 (25%) | ||
LamG | 3535..3689 | CDD:238058 | |||
Agrn | XP_017448655.1 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |