Sequence 1: | NP_476617.1 | Gene: | LanA / 38723 | FlyBaseID: | FBgn0002526 | Length: | 3712 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_037106.1 | Gene: | Lamb2 / 25473 | RGDID: | 2988 | Length: | 1801 | Species: | Rattus norvegicus |
Alignment Length: | 2879 | Identity: | 561/2879 - (19%) |
---|---|---|---|
Similarity: | 836/2879 - (29%) | Gaps: | 1327/2879 - (46%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 IGALLVILAISYCQ-----------AELTPPYFNLATGR--KIYATATCGQDTDGPELYCKLVGA 59
Fly 60 NTEHDHIDYSVIQGQVCDYCDPTVP--ERNHPPENAIDGT---------EAWWQSPPLSRGMKFN 113
Fly 114 EVNLTINFEQEFHVAYLFIRMGNSPRPGLWTLEKSTDYGKTWTPWQHFSDTPADCETYFGKDTYK 178
Fly 179 PITRDDDVICTTEYSKIVPLENGEIPVMLLNER-PSSTNYFNSTVLQEWTRATNVRIRLLRTKNL 242
Fly 243 LGHLMSVARQDPTVTRRYFYSIKDISIGGRCMCNGHADTCDVKDPKSPVRIL-----ACRCQHHT 302
Fly 303 CGIQCNECCPGFEQKKWRQNTNARPFNCEPCNCHGHSNECKYDEEVNRKGLSLDIHGHYDGGGVC 367
Fly 368 QNCQHNTVGINCNKCKPKYYRPKGKHWNETDVCSPCQCDYFFSTGHCEEETGNCECRAAFQPPSC 432
Fly 433 DSCAYGYYGYPNCRECECNLNGTNGYHCEAESGQQCPCKINFAGAYCKQCAEGYYGFPECKACEC 497
Fly 498 NKIGSITNDCNVTTGECKCLTNFGGDNCERCKHGYFNYPTCSYCDCDNQGTESEICNKQSGQCIC 562
Fly 563 REGFGGPRCDQCLPGFYNYPDCKPCNCSSTGSSAITCDNTGKCNCLNNFAGKQCTLCTAGYYSYP 627
Fly 628 DCLPCHCDSHGSQGVSCNSDGQCLCQPNFDGRQCDSCKEGFYNFPSCEDCNCDPA-GVIDKFAGC 691
Fly 692 GSVPVGELCKCKERVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPCK 756
Fly 757 PHTQGRRCQECRDGTFDLDSASLFGCKDCSCDVGGSWQSVCDKISGQCKCHPRITGLACTQPLTT 821
Fly 822 HFFPTLHQFQYEYEDGSLPSGTQVRYDYDEAAFPGFSSKGYVVFNAIQNDVRNEVNVFKSSL--- 883
Fly 884 --YRIVLRYVNPNAENVTATISVTSDNP------------LEVDQHVKVLLQPTSEPQFVTVAGP 934
Fly 935 LGVKPSAIVLDPGRYVFTTKANKNVMLDYFVLLPAAYYEAGILTRHISNPCELGNMELCRHYKYA 999
Fly 1000 SVEVFSPAATPFVIGENSKPTNPVETYTDPEHLQIVSHVGDIPVLSGSQNELHYIVDVPRSGRYI 1064
Fly 1065 FVIDYISDRNFPDSYYINLKLKDNPDSETSVLLYPCLYSTICRTSVNEDGMEKSFYINKEDLQPV 1129
Fly 1130 IISADIEDGSRFPIISVTAIPVDQWSIDYINPSPVCVIHDQQCATPKFRSVPDSKKIEFETD--- 1191
Fly 1192 ---HEDRIATNKPPYASLDERVKLVHLDSQNEATIVIESKVDATKPNLFVILVKYYQPSHPKYQV 1253
Fly 1254 YYTLTAGKNQYDGKFDIQHCPSSSGCRGVIRPAGEGSFEIDDEFKFTITTDRSQSVWLDYLVVVP 1318
Fly 1319 LKQYNDDLLVEETFDQTKEFIQNCGHDHFHITHNASDFCKKSVFSLTADYNSGALPCNCDYAGST 1383
Fly 1384 SFECHPFGGQCQCKPNVIERTCGACRSRYYGFPDCKPCKCPNSAMCEPTTGECMCPPNVIGDLCE 1448
Fly 1449 KCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQNIEGRACDVCSNGYFNFPHCEQ 1513
Fly 1514 CSCHKPGTELEVCDKIDGACFCKKNVVGRDCDQCVDGTYNLQESNPDGCTTCFCFGKTSRCDSAY 1578
Fly 1579 LRVYNVSLLKHVSITTPEFHEESIKFDMWPVPADEILLNETTLKADFTLREVNDERPAYFGVLDY 1643
Fly 1644 LLNQNNHISAYGGDLAYTLHFTSGFDGKYIVAPDVILFSEHNALVHTSYEQPSRNEPFTNRVNIV 1708
Fly 1709 ESNFQTISGKPVSRADFMMVLRDLKVIFIRANYWEQTLVTHLSDVYLTLADEDADGTGEYQFLAV 1773
Fly 1774 ERCSCPPGYSGHSCEDCAPGYYRDPSGPYGGYCIPCECNGHSETCDCATGICSKCQHGTEGDHCE 1838
Fly 1839 RCVSGYYGNATNGTPGDCMICACPL-PFDSNNFATSCEISESGDQIHCECKPGYTGPRCESCANG 1902
Fly 1903 FYGEPESIGQVCKPCECSGNINPEDQGSCDTRTGECLRCLNNTFGAACNLCAPGFYGDAIKLKNC 1967
Fly 1968 QSCDCDDLGTQT----------CDPFVGVCTCHENVIGDRCDRCKPDHYGFESGVGCRACDC-GA 2021
Fly 2022 ASNSTQCDPHTGHCACKSGVTGRQCDRCAVDHWKYEKDGCTPCNCNQGYSRGFG---CNPNTGKC 2083
Fly 2084 QCLPGVIGDRCDACPNRWVLIKDEGCQECNNCHHALLDVTDRMRYQIDSVLEDFNSVTLAFFTSQ 2148
Fly 2149 KLNYYDQLADELEPKVKLLDPNSVDLSPSKKANSELESDAKSYAKQVNQT-LANAFDIRERSSTT 2212
Fly 2213 LGNITVAYDEAVKSADQAKEAIASVEALSKNLEAAASTKIDAALEQAQHILGQINGTSIELTPNE 2277
Fly 2278 QVLEKARKLYEEVNTLVLPIKAQNKSLNALKND-------IGEFSDHLEDLFN------------ 2323
Fly 2324 -WSEASQAK----------------SADVERR---------------NVANQKAFDNSKFDT--- 2353
Fly 2354 ----VSEQKLQA------------------EKNIKDAGNFLING-----DLTLNQINQKLDNLRD 2391
Fly 2392 ALNELNSFNKNVDEELPVREDQHKEADALTD----------QAEQKAAELAIKAQD--------- 2437
Fly 2438 -----LAAQYTDMTASAEP------AIKAATAYSGIVEA----------VEAAQKLSQDA----- 2476
Fly 2477 -----------ISAAGNATDKTDGIEE---RAHLADTGSTDLLQRARQSLQKVQDDL---EPRLN 2524
Fly 2525 ASAGKVQKISAVNNATEHQLKDINKLIDQLPAESQRDMWKNSNANASDALEILKNVLEILEPV-- 2587
Fly 2588 SVQTPKEL--EKAHGINRDLDLTNKDVSQANKQLDDVEGSVSKLSELAEDIEEQQHRVGSQSRQL 2650
Fly 2651 GQEIENLKAQVEAARQLAN 2669 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanA | NP_476617.1 | LamNT | 18..271 | CDD:214532 | 73/277 (26%) |
EGF_Lam | 272..>314 | CDD:238012 | 16/46 (35%) | ||
EGF_Lam | 332..389 | CDD:238012 | 21/56 (38%) | ||
EGF_Lam | 402..443 | CDD:238012 | 1/40 (3%) | ||
EGF_Lam | 448..491 | CDD:238012 | 0/42 (0%) | ||
Laminin_EGF | 495..543 | CDD:278482 | 0/47 (0%) | ||
Laminin_EGF | 541..589 | CDD:278482 | 0/47 (0%) | ||
Laminin_EGF | 587..634 | CDD:278482 | 3/46 (7%) | ||
EGF_Lam | 631..673 | CDD:238012 | 12/41 (29%) | ||
Laminin_EGF | 677..729 | CDD:278482 | 15/52 (29%) | ||
Laminin_EGF | 732..782 | CDD:278482 | 18/49 (37%) | ||
EGF_Lam | 785..828 | CDD:238012 | 18/42 (43%) | ||
CBM6-CBM35-CBM36_like | 831..966 | CDD:271143 | 28/151 (19%) | ||
Laminin_EGF | 1375..1423 | CDD:278482 | 25/47 (53%) | ||
EGF_Lam | 1420..1457 | CDD:238012 | 0/36 (0%) | ||
Laminin_EGF | 1466..1516 | CDD:278482 | 17/49 (35%) | ||
Laminin_EGF | 1514..1562 | CDD:278482 | 0/47 (0%) | ||
LamB | 1632..1760 | CDD:214597 | 0/127 (0%) | ||
Laminin_EGF | <1775..1801 | CDD:278482 | 0/25 (0%) | ||
EGF_Lam | 1808..1851 | CDD:238012 | 20/42 (48%) | ||
EGF_Lam | 1859..1907 | CDD:214543 | 24/48 (50%) | ||
EGF_Lam | 1916..1968 | CDD:238012 | 28/51 (55%) | ||
EGF_Lam | 1969..2015 | CDD:238012 | 22/55 (40%) | ||
EGF_Lam | 2016..>2054 | CDD:238012 | 12/38 (32%) | ||
EGF_Lam | 2063..>2097 | CDD:238012 | 16/36 (44%) | ||
Laminin_I | 2129..2385 | CDD:283627 | 56/337 (17%) | ||
Tar | 2278..2662 | CDD:223910 | 100/530 (19%) | ||
Laminin_II | 2566..2700 | CDD:283628 | 24/108 (22%) | ||
LamG | 2674..2843 | CDD:238058 | |||
LamG | 2878..3029 | CDD:238058 | |||
LamG | 3078..3205 | CDD:214598 | |||
LamG | 3349..3512 | CDD:238058 | |||
LamG | 3535..3689 | CDD:238058 | |||
Lamb2 | NP_037106.1 | Laminin_N | 60..284 | CDD:278484 | 70/250 (28%) |
EGF_Lam | 286..338 | CDD:238012 | 17/52 (33%) | ||
EGF_Lam | 350..402 | CDD:238012 | 22/58 (38%) | ||
Laminin_EGF | 413..470 | CDD:278482 | 26/97 (27%) | ||
EGF_Lam | 472..523 | CDD:238012 | 19/51 (37%) | ||
EGF_Lam | 524..565 | CDD:238012 | 17/40 (43%) | ||
EGF_Lam | 786..831 | CDD:214543 | 25/87 (29%) | ||
Laminin_EGF | 834..882 | CDD:278482 | 19/344 (6%) | ||
Laminin_EGF | 880..927 | CDD:278482 | 20/46 (43%) | ||
EGF_Lam | 929..987 | CDD:238012 | 26/57 (46%) | ||
Laminin_EGF | 989..>1031 | CDD:278482 | 26/41 (63%) | ||
Laminin_EGF | 1041..1095 | CDD:278482 | 21/53 (40%) | ||
Laminin_EGF | 1098..1146 | CDD:278482 | 15/47 (32%) | ||
Laminin_EGF | 1146..>1185 | CDD:278482 | 17/41 (41%) | ||
Domain II | 1193..1412 | 52/301 (17%) | |||
Domain alpha | 1413..1445 | 3/31 (10%) | |||
Domain I | 1446..1801 | 75/367 (20%) | |||
DUF4398 | <1446..1516 | CDD:291044 | 17/69 (25%) | ||
flagell_FliJ | 1477..1617 | CDD:131526 | 26/139 (19%) | ||
HrpJ | 1485..1673 | CDD:301626 | 38/193 (20%) | ||
MscS_porin | 1582..1776 | CDD:289559 | 43/210 (20%) | ||
ATP-synt_B | <1684..1795 | CDD:304375 | 25/118 (21%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1684..1703 | 3/18 (17%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |