DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanA and eea-1

DIOPT Version :10

Sequence 1:NP_476617.1 Gene:LanA / 38723 FlyBaseID:FBgn0002526 Length:3712 Species:Drosophila melanogaster
Sequence 2:NP_001024127.1 Gene:eea-1 / 179832 WormBaseID:WBGene00011696 Length:1205 Species:Caenorhabditis elegans


Alignment Length:694 Identity:145/694 - (20%)
Similarity:280/694 - (40%) Gaps:169/694 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  2126 MRYQIDSVLEDFNSVTLAFF--------TSQKLNYYDQLADELEPKVKLL-----------DPNS 2171
            |..||..:..|...||..|.        .|::|....|...:|..|:|.:           :...
 Worm   144 MAQQIQVLTADKGMVTRQFLELEKESGQQSRELQQVKQERGDLMAKLKQMSVTMREITDESESGK 208

  Fly  2172 VDLSPSKKANSELESDAKSYAKQVNQTLANAFDIRERSS------TTLGNITVAYDEAVKSAD-Q 2229
            |::...|:....::||...|..:|:: |....|.|....      |.|.|.....|...:..| :
 Worm   209 VEMEDLKRELKVVKSDVVRYEIEVSR-LEKMLDQRPSEDDVNVLRTELVNAQKLMDAISQEKDIE 272

  Fly  2230 AKEAIASVEALS----------KNLEAAASTKIDAALEQAQHILGQINGTSIELTP-NEQVLEKA 2283
            .||.:.|:..||          :|||    .||....|..:.:....:..|.||.. ||:|::..
 Worm   273 IKEHLNSIRNLSMEREKQHIVNENLE----KKIGEGEETVKQLQISYDAQSEELKQRNERVVQLE 333

  Fly  2284 RKLYEEVNTLVLPIKAQNK-SLNALKNDIGEFSDHLEDLFNWSEASQAKSADVE---RRNVANQK 2344
            .::.|.|..|     ::|| ::..|::.:.|..|.|:.|.|.:.:::.:...:.   .||.|.:|
 Worm   334 ARIEENVFEL-----SENKQNVKRLEDKVQESQDALQMLSNINGSNEEQMISLNSKFERNTAERK 393

  Fly  2345 AFDNSKFDTVSEQKLQAE-KNIKDAGNFLINGDLTLNQINQKLDNLRDALNELNSFNKNVDEELP 2408
                 :.:.|.|:|:..: :.:|           ||...|      .|..|||.|....:|:|..
 Worm   394 -----RIEAVFEEKVTVQGERLK-----------TLEMAN------LDLTNELASMGSLLDKERS 436

  Fly  2409 VREDQHK---EADALTDQAEQKAAELAIKA--------------QDLAAQYTDMTASAEPAIKAA 2456
            :.|:::|   |.|:..:..::|.||...||              ::|..|...:..:::..::..
 Worm   437 LLEEKNKEISERDSSINDLKEKLAESEKKATKYKNELKEHADLVENLTLQLNKLQENSKDLMEKI 501

  Fly  2457 TAYSGIVEAVEAAQKLSQDAI--------------SAAGNATDKTDGIEERAHLADTGSTDLLQR 2507
            :|..|  .|..|.::|.|:.:              .|:|....|...:|::...|:...||..|:
 Worm   502 SAGEG--GAKMAIEQLEQEKVKLTNELQTSSEKTKKASGELEAKISELEKKLRDAEASRTDKEQK 564

  Fly  2508 ARQ-------SLQKVQDDL---------------EPRLNASAGKVQKISAVNNATEHQLKDINKL 2550
            .:|       .|.:.:|::               |.|..|:...::...|:.| :|..|:.|.| 
 Worm   565 WKQEKESFERKLAEAEDEIKRKGERFVEMEKEMEEERQKATDRTLKLKDALVN-SEKNLETIKK- 627

  Fly  2551 IDQLPAESQRDMWKNSNANASDALEILKNVLEILEPVSVQTPKELEKAHGINRDLDLTNKDVSQA 2615
                .:|.:..:.:..:|:..:..:.:::.::.||... :..:||| |...:||..::.|:    
 Worm   628 ----ESEDREKIVREKDAHLEENKKRIEDAVQKLEEAE-KRARELE-ASVSSRDTTVSTKE---- 682

  Fly  2616 NKQLDDVEGSVSKLSELAEDIEEQQHRVGSQSRQLGQEIENLKAQV---EA----------ARQL 2667
             .:|.:::|.:::.:...|:::.|..:|.::..:..||:|||.|::   ||          |:.|
 Worm   683 -SELSELKGKLTESNSFIEELKVQVEKVSNEISEKQQEVENLMAEMRDKEAHWKTKRDEFEAQML 746

  Fly  2668 ANSIKVGVNFKPSTIL-----------ELKTPEKTKLLATRTNL 2700
            .|...   |.:.|:.|           |....||.:|::.::.|
 Worm   747 RNQED---NEEASSTLKSVQEQLMKEKETSGEEKNQLISVKSQL 787

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanANP_476617.1 LamNT 18..271 CDD:214532
EGF_Lam 272..>314 CDD:238012
EGF_Lam 332..389 CDD:238012
EGF_Lam 402..443 CDD:238012
Laminin_EGF 448..497 CDD:395007
Laminin_EGF 495..543 CDD:395007
Laminin_EGF 541..589 CDD:395007
Laminin_EGF 587..634 CDD:395007
Laminin_EGF 632..679 CDD:395007
Laminin_EGF 677..729 CDD:395007
Laminin_EGF 732..782 CDD:395007
EGF_Lam 785..828 CDD:238012
CBM6-CBM35-CBM36_like 831..966 CDD:271143
Laminin_EGF 1375..1423 CDD:395007
EGF_Lam 1420..1457 CDD:238012
Laminin_EGF 1466..1516 CDD:395007
Laminin_EGF 1514..1562 CDD:395007
LamB 1632..1760 CDD:214597
Laminin_EGF <1775..1801 CDD:395007
EGF_Lam 1808..1851 CDD:238012
EGF_Lam 1859..1907 CDD:214543
EGF_Lam 1916..1968 CDD:238012
EGF_Lam 1969..2015 CDD:238012
EGF_Lam 2016..>2054 CDD:238012
EGF_Lam 2063..>2097 CDD:238012
Laminin_I 2134..2385 CDD:310534 63/292 (22%)
SMC_prok_B 2356..>2705 CDD:274008 85/423 (20%)
Laminin_II 2566..2700 CDD:368703 33/157 (21%)
LamG 2674..2843 CDD:238058 8/38 (21%)
LamG 2878..3029 CDD:238058
LamG 3078..3205 CDD:214598
LamG 3349..3512 CDD:238058
LamG 3535..3689 CDD:238058
eea-1NP_001024127.1 SMC_prok_B 163..1029 CDD:274008 138/675 (20%)
ClpA <1030..>1126 CDD:440308
FYVE_EEA1 1141..1203 CDD:277269
Blue background indicates that the domain is not in the aligned region.

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