| Sequence 1: | NP_476617.1 | Gene: | LanA / 38723 | FlyBaseID: | FBgn0002526 | Length: | 3712 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_032511.3 | Gene: | Lamc2 / 16782 | MGIID: | 99913 | Length: | 1193 | Species: | Mus musculus |
| Alignment Length: | 1448 | Identity: | 340/1448 - (23%) |
|---|---|---|---|
| Similarity: | 543/1448 - (37%) | Gaps: | 433/1448 - (29%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1367 DYNSGALPCNCD-----YAGSTSFECHPFGGQCQCKPNVIERTCGACRSRYYGFPD---CKPCKC 1423
Fly 1424 PN----SAMCEPTTGECMCPPNVIGDLCEKCAPNTYGFHQV--IGC--------EECACNPMGIA 1474
Fly 1475 NGNSQCDLFNGTCECRQNIEGRACDVCSNGYFNFPHCEQCSCHKPGTELEVCDKIDGACFCKKNV 1539
Fly 1540 VGRDCDQCVDGTYNLQESNPDGCTTCFCFGKTSRCD-SAYLRVYNVSLLKHVSITTPEFHEESIK 1603
Fly 1604 FDMWPVPADEILLNETTLKADFTLR------EVNDERPAYF-GVLDYLLNQNNHISAYGGDLAYT 1661
Fly 1662 LHFTSGFDGKYIVAPDVILFSEHNAL-VHTSYEQPSRNEP------FTNRVNIVESNFQTISGKP 1719
Fly 1720 VSRADFMMVLRDLKVIFIRANYWEQTLVTHLSDVYLTLADEDADGTGEYQFLAVERCSCPPGYSG 1784
Fly 1785 HSCEDCAPGYYRDPS--GPYGGYCIPCECNGHSETCDCATGICSKCQHGTEGD--HCERCVSGYY 1845
Fly 1846 GNATNGTPGDCMICACPLPFDSNNFATSCEISESGDQIHC-ECKPGYTGPRCESCANGFYGEPES 1909
Fly 1910 IGQ-----VCKPCECSGNINPEDQGSCDTRTGECLRCLNNTFGAACNLCAPGFYGDAI---KLKN 1966
Fly 1967 CQSCDCDDLGTQTCDPFVGVCTCHENVIGDRCDRCKPDHYGFESGVGCRACDCGAASNSTQCDPH 2031
Fly 2032 TGHCACKSGVTGRQCDRCAVDHWKYEKDGCTPCNCNQGYSRGFGCNPNTGKCQCLPGVIGDRCDA 2096
Fly 2097 CPNRWVLIKDEGCQECNNCHHALL---------------DVTDRMRYQIDSVLEDF--------- 2137
Fly 2138 ----NSVTLAFFTSQKLNYYDQLAD-----------------ELEPKVKLLDPNSVDLSPSKKA- 2180
Fly 2181 -NSELESDAKSYA-----KQVNQTLANAFDIRERSSTTLGNITVAYDEAVKSA-DQAKEAIAS-- 2236
Fly 2237 ---------VEALSKNLEAAAS---------TKIDAALEQA-QHIL------GQINGTSIELTPN 2276
Fly 2277 EQVLEKARKLYEEVNTLVLPIKAQNKSLNALKNDIGEFSDHLEDLFNW-SEASQAKSADVERRNV 2340
Fly 2341 ANQKAFDNSKFDTVSEQKLQAEKNIKDAGNFLINGDLTLNQINQKLDNLRDALNELNSFNKNVDE 2405
Fly 2406 ELPVREDQHKEADALTDQAEQKAAELAIKAQDLAAQYTDMTASAEPAIKAAT-----AYSGIVEA 2465
Fly 2466 VEAAQKLSQDAISAAGNATDKTDGIEERAHLADTGSTDLLQRARQSLQKVQDDL---EPRLNASA 2527
Fly 2528 GKVQKISAVNNATEHQLKDINKLIDQLPAESQRDMWKNSNANASDALEILKNVLEIL-EPVSVQT 2591
Fly 2592 PKELEKAHGINRDLDLTNKDVSQANKQLDDVEGSVSKLSELAEDIEEQQHRVGSQSRQLGQEIEN 2656
Fly 2657 LKAQVEAARQLANSIKVG 2674 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| LanA | NP_476617.1 | LamNT | 18..271 | CDD:214532 | |
| EGF_Lam | 272..>314 | CDD:238012 | |||
| EGF_Lam | 332..389 | CDD:238012 | |||
| EGF_Lam | 402..443 | CDD:238012 | |||
| EGF_Lam | 448..491 | CDD:238012 | |||
| Laminin_EGF | 495..543 | CDD:278482 | |||
| Laminin_EGF | 541..589 | CDD:278482 | |||
| Laminin_EGF | 587..634 | CDD:278482 | |||
| EGF_Lam | 631..673 | CDD:238012 | |||
| Laminin_EGF | 677..729 | CDD:278482 | |||
| Laminin_EGF | 732..782 | CDD:278482 | |||
| EGF_Lam | 785..828 | CDD:238012 | |||
| CBM6-CBM35-CBM36_like | 831..966 | CDD:271143 | |||
| Laminin_EGF | 1375..1423 | CDD:278482 | 16/55 (29%) | ||
| EGF_Lam | 1420..1457 | CDD:238012 | 15/40 (38%) | ||
| Laminin_EGF | 1466..1516 | CDD:278482 | 7/49 (14%) | ||
| Laminin_EGF | 1514..1562 | CDD:278482 | 14/47 (30%) | ||
| LamB | 1632..1760 | CDD:214597 | 36/135 (27%) | ||
| Laminin_EGF | <1775..1801 | CDD:278482 | 14/27 (52%) | ||
| EGF_Lam | 1808..1851 | CDD:238012 | 15/44 (34%) | ||
| EGF_Lam | 1859..1907 | CDD:214543 | 20/48 (42%) | ||
| EGF_Lam | 1916..1968 | CDD:238012 | 20/54 (37%) | ||
| EGF_Lam | 1969..2015 | CDD:238012 | 7/45 (16%) | ||
| EGF_Lam | 2016..>2054 | CDD:238012 | 9/37 (24%) | ||
| EGF_Lam | 2063..>2097 | CDD:238012 | 1/33 (3%) | ||
| Laminin_I | 2129..2385 | CDD:283627 | 59/321 (18%) | ||
| Tar | 2278..2662 | CDD:223910 | 82/393 (21%) | ||
| Laminin_II | 2566..2700 | CDD:283628 | 23/110 (21%) | ||
| LamG | 2674..2843 | CDD:238058 | 1/1 (100%) | ||
| LamG | 2878..3029 | CDD:238058 | |||
| LamG | 3078..3205 | CDD:214598 | |||
| LamG | 3349..3512 | CDD:238058 | |||
| LamG | 3535..3689 | CDD:238058 | |||
| Lamc2 | NP_032511.3 | Laminin_EGF | 28..86 | CDD:365839 | 18/63 (29%) |
| EGF_Lam | 83..127 | CDD:238012 | 18/47 (38%) | ||
| Laminin_EGF | 139..184 | CDD:365839 | 21/95 (22%) | ||
| Laminin_B | 245..370 | CDD:383018 | 36/135 (27%) | ||
| EGF_Lam | 461..509 | CDD:238012 | 22/56 (39%) | ||
| Laminin_EGF | 517..564 | CDD:365839 | 20/46 (43%) | ||
| EGF_Lam | 572..>604 | CDD:238012 | 14/78 (18%) | ||
| Cell attachment site. /evidence=ECO:0000255 | 586..588 | 0/7 (0%) | |||
| SMC_prok_B | <614..1192 | CDD:274008 | 129/667 (19%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.810 | |||||