Sequence 1: | NP_476617.1 | Gene: | LanA / 38723 | FlyBaseID: | FBgn0002526 | Length: | 3712 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006525748.1 | Gene: | Lama3 / 16774 | MGIID: | 99909 | Length: | 3331 | Species: | Mus musculus |
Alignment Length: | 3907 | Identity: | 1142/3907 - (29%) |
---|---|---|---|
Similarity: | 1742/3907 - (44%) | Gaps: | 779/3907 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MGHGVASIGALLVILAI----------------SYCQAELTPPYFNLATGRKIYATATCGQ---- 45
Fly 46 -DTDGPELYCKLVG--ANTEHDHIDYSVIQGQVCDYCDPTVPERNHPPENAIDGTEAWWQSPPLS 107
Fly 108 RGMKFNEVNLTINFEQEFHVAYLFIRMGNSPRPGLWTLEKSTDYGKTWTPWQHFSDTPADCETYF 172
Fly 173 GKDTYKPITRDDDVICTTEYSKIVPLENGEIPVMLLNERPSSTNYFNSTVLQEWTRATNVRIRLL 237
Fly 238 RTKNLLGHLMSVARQDPTVTRRYFYSIKDISIGGRCMCNGHADTCDVKDPKSPVRILACRCQHHT 302
Fly 303 CGIQCNECCPGFEQKKWRQNTNARPFNCEPCNCHGHSNECKYDEEVNRKGLSLDIHGHYDGGGVC 367
Fly 368 QNCQHNTVGINCNKCKPKYYRPKGKHWNETDVCSPCQCDYFFSTGHCEEETGNCECRAAFQPPSC 432
Fly 433 DSCAYGYYGYPNCRECECNLNGTNGYHCEAESGQQCPCKINFAGAYCKQCAEGYYGFPECKACEC 497
Fly 498 NKIGSITNDCNVTTGECKCLTNFGGDNCERCKHGYFNYPTCSYCDCDNQGTESEICNKQSGQCIC 562
Fly 563 REGFGGPRCDQCLPGFYNYPDCKPCNCSSTGSSAITCDNTGKCNCLNNFAGKQCTLCTAGYYSYP 627
Fly 628 DCLPCHCDSHGSQGVSCNSDGQCLCQPNFDGRQCDSCKEGFYNFPSCEDCN--CDPAGVIDKFAG 690
Fly 691 CGSVPVGELCKCKERVTGRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPC 755
Fly 756 KPHTQGRRCQECRDGTFDLDSASLFGCKDCSCDVGGSWQSVCDKISGQCKCHPRITGLACTQPLT 820
Fly 821 THFFPTLHQFQYEYEDGSLPSGTQVRYDYDEAAFPGFSSKGYVVFNAIQNDVRNEVNVFKS--SL 883
Fly 884 YRIVLRYVNPNAENVTATISV-TSDNPLEVDQHVKVLLQPTSEPQFVTV-----AGPLGVKPSAI 942
Fly 943 VLDPGRYVFTTKANKNVMLDYFVLLPAAYYEAGILTRHISNPC-ELGN-MELCRHYKYASVEVFS 1005
Fly 1006 PA----ATPFVIGENSKP---TNPVETYTDPEHLQIVSHVGDIPVLSGSQNELHYIVDVPRSGRY 1063
Fly 1064 IFVIDYISDRNFPDSYYINLKLKDNPDS-ETSVLLYPCLYSTICRTSVNEDGMEKSFYINKEDLQ 1127
Fly 1128 PVIISADIE---DGSRFPIISVTAIPVDQWSIDYINPSPVCVIHDQQCATPKFRSVPDSKKIEFE 1189
Fly 1190 TDHEDRIATNKPPYASLDERVK------LVHLDSQNEATIVIES-----KVDATKPNL--FVILV 1241
Fly 1242 KYYQPSHPKYQVYYTLTAGKNQYDGKFDIQHCPSSSGCRGVIRPAGEGSFEIDD-EFKFTITTDR 1305
Fly 1306 SQSVWLDYLVVVPLKQYNDDLLVEETFDQTKEFIQNCGHDHFHI-THNASDFCKKSVFSLTADYN 1369
Fly 1370 SGALPCNCDYAGSTSFECHPFGGQCQCKPNVIERTCGACRSRYYGFPDCKPCKCPNSAMCEPTTG 1434
Fly 1435 ECMCPPNVIGDLCEKCAPNTYGFHQVIGCEECACNPMG-IANGNSQCDLFNGTCECRQNIEGRAC 1498
Fly 1499 DVCSNGYFNFPHCEQCSCHKPGTELEVCDKIDGACFCKKNVVGRDCDQCVDGTYNLQESNPDGCT 1563
Fly 1564 TCFCFGKTSRCDSAYLRVYNVSLLKHVSITTPEFHEESIKF-DM--WPV-PADEILL------NE 1618
Fly 1619 TTLKADFTLREVNDE--------RPAYFGVLDYLLNQNNHISAYGGDLAYTLHFTS-GFDGKYIV 1674
Fly 1675 ---APDVILFSEHNALVHTSYEQPSRNEPFTNRVNIVESNFQ-TISGKPVSRADFMMVLRDLKVI 1735
Fly 1736 FIRANYWEQTLVTHLSDVYLTLADEDADGTGEYQFLAVERCSCPPGYSGHSCEDCAPGYYRDPSG 1800
Fly 1801 PYGGYCIPCECNGHSETCDCATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICACPLPF 1865
Fly 1866 DSNNFATSCEISESGDQIHCECKPGYTGPRCESCANGFYGEPESIGQVCKPCECSGNINPEDQGS 1930
Fly 1931 CDTRTGECLRCLNNTFGAACNLCAPGFYGDAIKLKNCQSCDCDDLGTQTCDPFVGVCTCHENVIG 1995
Fly 1996 DRCDRCKPDHYGFESGVGCRACDCGAASNSTQCDPHTGHCACKSGVTGRQCDRCAVDHWKYEKDG 2060
Fly 2061 CTPCNCNQGYSRGFGCNPNTGKCQCLPGVIGDRCDACPNRWVLIKDEGCQECNNCHHALLDVTDR 2125
Fly 2126 MRYQIDSVLEDFNSVTLAFFTSQKLNYYDQLADELEPKVKLLDPNSVDLSPSKKANSELESDAKS 2190
Fly 2191 YAKQVNQTLANAFDIRERSSTTLGNITVAYDEAVKSADQ----AKEAIASVEALSKNLEAAASTK 2251
Fly 2252 ID-------AALEQAQHILGQINGTSIELTPNEQVLEK--ARKLYEEVNTLVLPIKAQNKSLNAL 2307
Fly 2308 KN---DIGEFSDHLEDLFN--WSEASQAKSA-DVERRNVANQKAFDNSKFDTVSEQKLQAEKNIK 2366
Fly 2367 DAGNFLINGDLTLNQIN---QKLDNLRDALNELNSFNKNVDEELP--VREDQHKEADA-LTDQAE 2425
Fly 2426 QKAAELAIKAQDLAAQYTDMTASAEP------AIKAATAYSGIVEAVEAAQKLSQDAISAAGNA- 2483
Fly 2484 -TDKTDGIEERAHLADTGSTDLLQRARQSLQKVQDDLEPRLNASAGKVQKISAVNNATEHQLKDI 2547
Fly 2548 NKLI--DQLPAESQRDMWK---NSNANASDALEILKNVLEILEPVSVQTPKELEKAHGINRDLDL 2607
Fly 2608 TNKDVSQANKQLDDVEGSVSKLSELAEDIEEQQHRVGSQSRQLG---QEIENLKAQVEAARQLAN 2669
Fly 2670 SIKVGVNFKPSTILELKTPEKTKLLATRTNLSTYFR---TTEPSG----FLLYLGNDNKTAQKNN 2727
Fly 2728 DFVAVEIVNGYPILTIDLGNGPERITSDKYVADGRWYQAVVDRMG-----PNAKLTIREEL---- 2783
Fly 2784 PNGDVVEHSKSGYLEGSQNILHVD-KNSRLFVGGYPGISDFNAPPDLTTNSFSGDIEDLKIGDES 2847
Fly 2848 VGLWNFVYGDDNDQGARERDVLLEKKKPVTGLRFKGNGYVQLNATSNLKSRSSIQFSFKADKDTS 2912
Fly 2913 NGLLFFYGRDKHYMSIEMIDGAIFFNISLGEGGGVQSGSQDRYNDNQWHKVQAERENRNGLLKVD 2977
Fly 2978 D----IVISRTNAPLEADLELPKLRRLYFGGHP----RRLNTSISLQPNFDGCIDNVVINQGVVD 3034
Fly 3035 LTEYVTGGGVEEGCSAKFSTVVSYAPHEYGFLRMNN--VSSDNNLHVVLHFKTTQPNGVLFYAAN 3097
Fly 3098 HD-QSSTIGLSLQDGLLKLNSMGSQLVI-------DDRILNDGEDHVVTVQHTQGELRLTVDDV- 3153
Fly 3154 --DNKRLGS----PQPLILEGGDIFFAGLPDNYRTPRNALASLAYFVGCISDVTV-----NEEII 3207
Fly 3208 NFANSAEKKNGNINGC----PPHVLAYEPSLVPSYYPSGDNEVESPWSNADTL----PPLKPDIE 3264
Fly 3265 ------STLPPTTPTTTTTTTTTTTSTTTTSTTTTTTTPSPIVIDEEKEIEAKTPQKILTTRPPA 3323
Fly 3324 KLNLPSDERCKLPEQPNFDVDFTEAGYRFYGLREQRLQINSLPVKVRRHHDIGISFRTERPNGLL 3388
Fly 3389 IYAGSKQRDDFIAVYLLDGRVTYEIRVGAQLQAKITTEAELNDGTWHTVEVVRTQRKVSLLIDKL 3453
Fly 3454 E-QPGSVDLNAERSAPVLAVELPIYLGGVNKFLESEVKNLTDFKTEVPY--FNGCLKNIKFDAMD 3515
Fly 3516 LETPPEEFGVVPC-SEQVERGLFFNNQKAFVKIFDHFDVGTEMKISFDFRPRDPNGLLFSVHGKN 3579
Fly 3580 SYAILELVDNTLYF---TVKTDLKNIV-STNYKLPNNESFCDGKTRNVQAIKSKFVINIAVDFIS 3640
Fly 3641 SNPGVGNEGSVITRTNR-PLFLGGHVAFQRAPGIKTKKSFKGCISKVEVNQRMINIT-PNMVVGD 3703
Fly 3704 IWQGYCP 3710 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanA | NP_476617.1 | LamNT | 18..271 | CDD:214532 | 139/259 (54%) |
EGF_Lam | 272..>314 | CDD:238012 | 22/41 (54%) | ||
EGF_Lam | 332..389 | CDD:238012 | 31/56 (55%) | ||
EGF_Lam | 402..443 | CDD:238012 | 8/40 (20%) | ||
EGF_Lam | 448..491 | CDD:238012 | 16/42 (38%) | ||
Laminin_EGF | 495..543 | CDD:278482 | 6/47 (13%) | ||
Laminin_EGF | 541..589 | CDD:278482 | 22/47 (47%) | ||
Laminin_EGF | 587..634 | CDD:278482 | 7/46 (15%) | ||
EGF_Lam | 631..673 | CDD:238012 | 14/41 (34%) | ||
Laminin_EGF | 677..729 | CDD:278482 | 20/53 (38%) | ||
Laminin_EGF | 732..782 | CDD:278482 | 19/49 (39%) | ||
EGF_Lam | 785..828 | CDD:238012 | 15/42 (36%) | ||
CBM6-CBM35-CBM36_like | 831..966 | CDD:271143 | 51/142 (36%) | ||
Laminin_EGF | 1375..1423 | CDD:278482 | 28/47 (60%) | ||
EGF_Lam | 1420..1457 | CDD:238012 | 15/36 (42%) | ||
Laminin_EGF | 1466..1516 | CDD:278482 | 19/50 (38%) | ||
Laminin_EGF | 1514..1562 | CDD:278482 | 23/47 (49%) | ||
LamB | 1632..1760 | CDD:214597 | 42/140 (30%) | ||
Laminin_EGF | <1775..1801 | CDD:278482 | 14/25 (56%) | ||
EGF_Lam | 1808..1851 | CDD:238012 | 26/42 (62%) | ||
EGF_Lam | 1859..1907 | CDD:214543 | 23/47 (49%) | ||
EGF_Lam | 1916..1968 | CDD:238012 | 10/51 (20%) | ||
EGF_Lam | 1969..2015 | CDD:238012 | 0/45 (0%) | ||
EGF_Lam | 2016..>2054 | CDD:238012 | 0/37 (0%) | ||
EGF_Lam | 2063..>2097 | CDD:238012 | 1/33 (3%) | ||
Laminin_I | 2129..2385 | CDD:283627 | 56/277 (20%) | ||
Tar | 2278..2662 | CDD:223910 | 97/413 (23%) | ||
Laminin_II | 2566..2700 | CDD:283628 | 29/136 (21%) | ||
LamG | 2674..2843 | CDD:238058 | 49/185 (26%) | ||
LamG | 2878..3029 | CDD:238058 | 34/158 (22%) | ||
LamG | 3078..3205 | CDD:214598 | 42/146 (29%) | ||
LamG | 3349..3512 | CDD:238058 | 42/165 (25%) | ||
LamG | 3535..3689 | CDD:238058 | 28/158 (18%) | ||
Lama3 | XP_006525748.1 | LamNT | 40..294 | CDD:214532 | 139/257 (54%) |
EGF_Lam | 295..343 | CDD:238012 | 25/50 (50%) | ||
EGF_Lam | 352..420 | CDD:238012 | 34/67 (51%) | ||
EGF_Lam | 422..462 | CDD:238012 | 23/87 (26%) | ||
Laminin_EGF | 488..535 | CDD:365839 | 22/47 (47%) | ||
EGF_Lam | 532..574 | CDD:238012 | 20/85 (24%) | ||
Laminin_EGF | 628..678 | CDD:365839 | 19/49 (39%) | ||
EGF_Lam | 681..724 | CDD:238012 | 15/42 (36%) | ||
Laminin_EGF | 1263..1311 | CDD:365839 | 28/47 (60%) | ||
EGF_Lam | 1308..1349 | CDD:238012 | 18/41 (44%) | ||
Laminin_EGF | 1353..1404 | CDD:365839 | 19/50 (38%) | ||
EGF_Lam | 1401..1451 | CDD:238012 | 24/49 (49%) | ||
LamB | 1509..1638 | CDD:214597 | 42/139 (30%) | ||
EGF_Lam | 1683..1729 | CDD:238012 | 27/48 (56%) | ||
EGF_Lam | 1731..1782 | CDD:238012 | 25/55 (45%) | ||
Laminin_I | 1844..2101 | CDD:310534 | 57/273 (21%) | ||
SMC_prok_B | <2062..>2329 | CDD:274008 | 67/284 (24%) | ||
Laminin_II | 2285..2413 | CDD:368703 | 29/136 (21%) | ||
LamG | 2432..2567 | CDD:214598 | 40/143 (28%) | ||
LamG | 2599..2739 | CDD:238058 | 34/154 (22%) | ||
LamG | 2766..2898 | CDD:238058 | 45/161 (28%) | ||
LamG | 2990..3132 | CDD:238058 | 48/230 (21%) | ||
LamG | 3156..3307 | CDD:238058 | 28/158 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 301 | 1.000 | Domainoid score | I1408 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG45870 | |
OrthoDB | 1 | 1.010 | - | - | D1919at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003375 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X3259 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
8 | 7.790 |