| Sequence 1: | NP_476617.1 | Gene: | LanA / 38723 | FlyBaseID: | FBgn0002526 | Length: | 3712 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001178538.1 | Gene: | Lama5 / 140433 | RGDID: | 621023 | Length: | 3713 | Species: | Rattus norvegicus |
| Alignment Length: | 3960 | Identity: | 1257/3960 - (31%) |
|---|---|---|---|
| Similarity: | 1851/3960 - (46%) | Gaps: | 596/3960 - (15%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 24 LTPPYFNLATGRKIYATATCGQDT-------DGPELYCKLVGANTEHDHIDYSVIQGQVCDYCDP 81
Fly 82 TVPERNHPPENAIDGTEAWWQSPPLSRGMKFNEVNLTINFEQEFHVAYLFIRMGNSPRPGLWTLE 146
Fly 147 KSTDYGKTWTPWQHFSDTPADCETYFGKDTYKPITRDDDVICTTEYSKIVPLENGEIPVMLLNER 211
Fly 212 PSSTNYFNSTVLQEWTRATNVRIRLLRTKNLLGHLMSVARQDPTVTRRYFYSIKDISIGGRCMCN 276
Fly 277 GHADTCDVKDPKSPVRILACRCQHHTCGIQCNECCPGFEQKKWRQNTNARPFNCEPCNCHGHSNE 341
Fly 342 CKYDEEVNRKGLSLDIHGHYDGGGVCQNCQHNTVGINCNKCKPKYYRPKGKHWNETDVCSPCQCD 406
Fly 407 YFFSTGHCEEETGNCECRAAFQPPSCDSCAYGYYGYPNCR---------------------ECEC 450
Fly 451 NLNGTNGYHCEAESG-QQCPCKINFAGAYCKQCAEGYYGFPECKACECNKIGSITNDCNVTTGEC 514
Fly 515 KCLTNFGGDNCERCKHGYFNYPTCSYCDCDNQGTESEICNKQSGQCICREGFGGPRCDQCLPGFY 579
Fly 580 NYPDCKPCNCSSTGSSAITCDNTGKCNCLNNFAGKQCTLCTAGYYSYPDCLPCHCDSHGSQGVSC 644
Fly 645 N-SDGQCLCQPNFDGRQCDSCKEGFYNFPSCEDCNCDPAGVIDKFAGCGSVPVGEL-CKCKERVT 707
Fly 708 GRICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRDGTF 772
Fly 773 DLDSASLFGCKDCSCDVGGSWQSVCDKISGQCKCHPRITGLACTQPLTTHFFPTLHQFQYEYEDG 837
Fly 838 SLPSGTQVRYDYDEAAFPGFSSKGYVVFNAIQNDVRNEVNVFKSSLYRIVLRYVNPNAENVTATI 902
Fly 903 SVTSDNPLE-----VDQHVKVLLQPTSEPQFVTVAGPLGVKPSAIVLDPGRYVFTTKANKNVMLD 962
Fly 963 YFVLLPAAYYEAGILTRHISNPC-----ELGNMELCRHYKYASVEVFSPAATPFVI--GENSKPT 1020
Fly 1021 NPVETYTDPEHLQIVSHVGDIPVLSGSQNELHYIVDVPRSGRYIFVIDYISDRNFPDSYYINLKL 1085
Fly 1086 KDNPDSETSVLLYPCLYSTICRTSVNEDGMEKS-FYINKEDLQPVIISADIE---DGSRFPIISV 1146
Fly 1147 TAIPVDQWSIDYINPSPVCVIH-------DQQCATPKFRSVP------DSKKIEFETD----HED 1194
Fly 1195 RIATN--------KPPYASLDERVKLVHLDSQNEATIVIESKVDATKPNL--FVILVKYYQPSHP 1249
Fly 1250 KYQVYYTLTAGKNQYDGKFDIQHCPSSSGCRGVIRPAGEGSFEI-DDEFKFTITTDRSQSVWLDY 1313
Fly 1314 LVVVPLKQYNDDLLVEETFDQTKEFIQNCGHDHFHITHNASD-FCKKSVFSLTADYNSGALPCNC 1377
Fly 1378 DYAGSTSFECHPFGGQCQCKPNVIERTCGACRSRYYGFPDCKPCKCPNSAMCEPTTGECMCPPNV 1442
Fly 1443 IGDLCEKCAPNTYGFHQVIGCEECACNPMGIAN-GNSQCDLFNGTCECRQNIEGRACDVCSNGYF 1506
Fly 1507 NFPHCEQCSCHKPGTELEVCDKIDGACFCKKNVVGRDCDQCVDGTYNLQESNPDGCTTCFCFGKT 1571
Fly 1572 SRC-DSAYLR-----VYNVSLLKHVSITTPEFHEESIKFDMWPVPADEILLNETTLKADFTLREV 1630
Fly 1631 N-DERPAYFGVLDYLLNQNNHISAYGGDLAYTLHFTSGFDGKYI---VAPDVILFSEHNALVHTS 1691
Fly 1692 YEQPSRNEPFTNRVNIVESNFQTI-SGKPVSRADFMMVLRDLKVIFIRANYWEQTLVTHLSDVYL 1755
Fly 1756 TLADEDADGTGEYQFLAVERCSCPPGYSGHSCEDCAPGYYRDPSGPYGGYCIPCECNGHSETCDC 1820
Fly 1821 ATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICACPLPFDSNNFATSCEISESGDQIHC 1885
Fly 1886 ECKPGYTGPRCESCANGFYGEPESIGQVCKPCECSGNINPEDQGS-CDTRTGECLRCLNNTFGAA 1949
Fly 1950 CNLCAPGFYGDAIKLKNCQSCDCDDLGTQTCDPFVGVCTCHENVIGDRCDRCKPDHYGFESGVGC 2014
Fly 2015 RACDCGAASNSTQCDPHTGHCACKSGVTGRQCDRCAVDHWKYEKDGCTPCNCNQGYSRGFGCNPN 2079
Fly 2080 TGKCQCLPGVIGDRCDAC--------PNRWVLIKDEG-----CQECNNCHHALLDVTDRMRYQID 2131
Fly 2132 SV---LEDFNSVTLAFFTSQKLNY---------------YDQLADELEPKVKLLDPNSVDLSPSK 2178
Fly 2179 KANSELESDAKSYAKQVNQTLANAFDIRERSSTTL-------------------GNITVAYDEAV 2224
Fly 2225 KSADQAKEAIASVEALSKNLE----AAASTKIDAALEQAQHILGQINGTSIELTPNEQVLEKARK 2285
Fly 2286 LYEEVNTLVLPIKAQNKSLNALKNDIGEFSDHLEDLFNWSEASQAKSADVERRNVANQKAFDNSK 2350
Fly 2351 FDTVSEQKLQAEKNIKDAGNFLINGDLTLNQINQKLDNLRDALNELNSFNKNVD---EELPVRED 2412
Fly 2413 QHKEADALTDQAE------QKAAELAIKAQDLAAQYTDMTASAEPAIKAATAYSGIVEAVEAAQK 2471
Fly 2472 LSQDAISAAGNATDKTDGIEERAHLADTGSTDLLQRARQSLQKVQDDLEPRLNASAGKVQKISAV 2536
Fly 2537 NNATEHQLKDINKLIDQLPAESQ--RDMWKNSNANASDALEILKNVLEILEPVSVQTPKELEKAH 2599
Fly 2600 GINRDLD--------LTNKDVSQANKQLDDVEGSVSKLS----ELAEDIEEQQHR-VGSQSRQLG 2651
Fly 2652 QEIENLKAQVEAARQLANSIKVGVNFKPSTILELKTPEKTKLLATRTNLSTYFRTTEPS------ 2710
Fly 2711 ---GFLLYLGNDNKTAQKNNDFVAVEIVNGYPILTIDLGN-GPERITSDKYVADGRWYQAV-VDR 2770
Fly 2771 ---MGPNAKLTIREELPN---GDVVEHSKSGYLEGSQNILHVDKNSRLF-VGGYPGISDFNAPPD 2828
Fly 2829 LTTNSFSGDIEDLKIGDESVGLWNFVYGDDNDQGARERDVLLEK---KKPVT-------GLRFKG 2883
Fly 2884 NGYVQL---NATSNLKSRSSIQFSFKADKDTSNGLLFFYGRDKHYMSIEMIDGAIFFNISLGEG- 2944
Fly 2945 ----------------GGVQ----SGSQDRYNDNQWHKVQAER------ENRNGLLKVDDIVISR 2983
Fly 2984 TNAPLEADLEL-PKLRRLY-FGGHPRRLNTSISLQPNFDGCIDNVVINQGVVDLTEYVTGGGVEE 3046
Fly 3047 GCSAKFSTVVSYAPHEYGFLRM---NNVSSDNNLHVVLHFKTTQPNGVLFYAANHDQSSTIGLSL 3108
Fly 3109 QDGLLKLNSMGSQLVIDDRILNDGEDHVVTVQHTQGELRLTVDD---VDNKRLGSPQPLILEGGD 3170
Fly 3171 ---IFFAGLPDNYRTPRNALASLAYFVGCISDVTVN-----EEIINFANSAEKKNGNIN---GCP 3224
Fly 3225 PHVLAYEPSLVPSYYPSGDNEVESPWSNADTLPPLKPDIESTLPPTTPTTTTTTTTTTTSTTTTS 3289
Fly 3290 TTTTTTTPSPIVIDEEKEIEAKTPQKILTTRPPAKLNLPSDERCKLPEQPNFDVDFTEAGYRFYG 3354
Fly 3355 L---REQRLQINSLPVKVRRHHDIGISFRTERPNGLLIY-AGSKQRDDFIAVYLLDGRVTYEIR- 3414
Fly 3415 VGAQLQAKITTEAELNDGTWHTVEVVRTQRKVSLLIDKLEQPGSVDLNAERSAP---VLAVELP- 3475
Fly 3476 ---IYLGGVNKFLESEVKNLTDFKTEVPY---FNGCLKNIKFDAMDLETPPEEFGVVPC-SEQVE 3533
Fly 3534 RGLFFNNQKAFVKI------FDHFDVGTEMKISFDFRPRDPNGLLFSVHGKNS--YAILELVDNT 3590
Fly 3591 LYFTVKTDLKNIVSTNYKLPNNESFCDGKTRNVQAIKSKFVINIAVDFISSNPGVGNEGSVITRT 3655
Fly 3656 NRPLFLG----GHVAFQRAPGIKTKKSFKGCISKVEVNQRMINITPN-MVVGDIWQGYCP 3710 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| LanA | NP_476617.1 | LamNT | 18..271 | CDD:214532 | 146/253 (58%) |
| EGF_Lam | 272..>314 | CDD:238012 | 26/41 (63%) | ||
| EGF_Lam | 332..389 | CDD:238012 | 30/56 (54%) | ||
| EGF_Lam | 402..443 | CDD:238012 | 18/40 (45%) | ||
| Laminin_EGF | 448..497 | CDD:395007 | 22/49 (45%) | ||
| Laminin_EGF | 495..543 | CDD:395007 | 19/47 (40%) | ||
| Laminin_EGF | 541..589 | CDD:395007 | 25/47 (53%) | ||
| Laminin_EGF | 587..634 | CDD:395007 | 17/46 (37%) | ||
| Laminin_EGF | 632..679 | CDD:395007 | 22/47 (47%) | ||
| Laminin_EGF | 677..729 | CDD:395007 | 19/52 (37%) | ||
| Laminin_EGF | 732..782 | CDD:395007 | 20/49 (41%) | ||
| EGF_Lam | 785..828 | CDD:238012 | 16/42 (38%) | ||
| CBM6-CBM35-CBM36_like | 831..966 | CDD:271143 | 45/139 (32%) | ||
| Laminin_EGF | 1375..1423 | CDD:395007 | 23/47 (49%) | ||
| EGF_Lam | 1420..1457 | CDD:238012 | 13/36 (36%) | ||
| Laminin_EGF | 1466..1516 | CDD:395007 | 19/50 (38%) | ||
| Laminin_EGF | 1514..1562 | CDD:395007 | 24/47 (51%) | ||
| LamB | 1632..1760 | CDD:214597 | 38/131 (29%) | ||
| Laminin_EGF | <1775..1801 | CDD:395007 | 15/25 (60%) | ||
| EGF_Lam | 1808..1851 | CDD:238012 | 21/42 (50%) | ||
| EGF_Lam | 1859..1907 | CDD:214543 | 24/47 (51%) | ||
| EGF_Lam | 1916..1968 | CDD:238012 | 27/52 (52%) | ||
| EGF_Lam | 1969..2015 | CDD:238012 | 23/45 (51%) | ||
| EGF_Lam | 2016..>2054 | CDD:238012 | 17/37 (46%) | ||
| EGF_Lam | 2063..>2097 | CDD:238012 | 15/33 (45%) | ||
| Laminin_I | 2134..2385 | CDD:310534 | 57/288 (20%) | ||
| SMC_prok_B | 2356..>2705 | CDD:274008 | 88/372 (24%) | ||
| Laminin_II | 2566..2700 | CDD:368703 | 34/146 (23%) | ||
| LamG | 2674..2843 | CDD:238058 | 48/186 (26%) | ||
| LamG | 2878..3029 | CDD:238058 | 39/182 (21%) | ||
| LamG | 3078..3205 | CDD:214598 | 35/137 (26%) | ||
| LamG | 3349..3512 | CDD:238058 | 45/177 (25%) | ||
| LamG | 3535..3689 | CDD:238058 | 39/165 (24%) | ||
| Lama5 | NP_001178538.1 | Laminin_N | 49..302 | CDD:459653 | 146/253 (58%) |
| EGF_Lam | 303..351 | CDD:238012 | 30/48 (63%) | ||
| EGF_Lam | 362..425 | CDD:238012 | 31/62 (50%) | ||
| EGF_Lam | 432..473 | CDD:238012 | 18/40 (45%) | ||
| EGF_Lam | 499..546 | CDD:214543 | 21/47 (45%) | ||
| EGF_Lam | 545..588 | CDD:238012 | 16/42 (38%) | ||
| Laminin_EGF | 592..639 | CDD:395007 | 25/47 (53%) | ||
| Laminin_EGF | 637..684 | CDD:395007 | 17/46 (37%) | ||
| EGF_Lam | 681..723 | CDD:238012 | 19/41 (46%) | ||
| EGF_Lam | 780..831 | CDD:238012 | 21/51 (41%) | ||
| EGF_Lam | 832..>871 | CDD:238012 | 14/38 (37%) | ||
| Laminin_EGF | 1442..1490 | CDD:395007 | 23/47 (49%) | ||
| Laminin_EGF | 1532..1583 | CDD:395007 | 19/50 (38%) | ||
| Laminin_EGF | 1581..1629 | CDD:395007 | 24/47 (51%) | ||
| Laminin_B | 1693..1829 | CDD:459652 | 40/147 (27%) | ||
| EGF_Lam | 1863..>1899 | CDD:238012 | 20/35 (57%) | ||
| Laminin_EGF | 1914..1967 | CDD:395007 | 26/54 (48%) | ||
| EGF_Lam | 1969..2022 | CDD:238012 | 27/52 (52%) | ||
| EGF_Lam | 2024..2068 | CDD:214543 | 22/43 (51%) | ||
| EGF_Lam | 2070..2116 | CDD:238012 | 19/45 (42%) | ||
| EGF_Lam | 2118..2168 | CDD:214543 | 20/60 (33%) | ||
| Laminin_I | 2193..2448 | CDD:310534 | 58/295 (20%) | ||
| Smc | <2309..>2616 | CDD:440809 | 79/348 (23%) | ||
| Laminin_II | 2639..2760 | CDD:368703 | 31/126 (25%) | ||
| LamG | 2781..2908 | CDD:214598 | 38/142 (27%) | ||
| LamG | 2943..3095 | CDD:238058 | 39/180 (22%) | ||
| LamG | 3151..3269 | CDD:214598 | 35/128 (27%) | ||
| LamG | 3338..3490 | CDD:238058 | 47/198 (24%) | ||
| LamG | 3514..3663 | CDD:238058 | 39/165 (24%) |