Sequence 1: | NP_476617.1 | Gene: | LanA / 38723 | FlyBaseID: | FBgn0002526 | Length: | 3712 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011516423.1 | Gene: | LAMC3 / 10319 | HGNCID: | 6494 | Length: | 1581 | Species: | Homo sapiens |
Alignment Length: | 2746 | Identity: | 515/2746 - (18%) |
---|---|---|---|
Similarity: | 764/2746 - (27%) | Gaps: | 1356/2746 - (49%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 PPYFNLATGRKIYATATCGQDTDGPELYCKLVGANTEHDHIDYSVIQGQVCDYCDPTVPERNHPP 90
Fly 91 ENAID----GTEAWWQSPPLSRGMKF-NEVNLTINFEQEFHVAYLFIRMGNSPRPGLWTLEKSTD 150
Fly 151 YGKTWTPWQHFSDTPADCETYFGKDTYKPITRDDD---VICTTEYSKIVPLENGEIPVMLLNERP 212
Fly 213 SSTNYFNSTVLQEWTRATNVRIRLLRTKNLLGHLMSVARQDPTVTRRYFYSIKDISIGGRCMCNG 277
Fly 278 HADTC--DVKDPKSPVRILACRCQHHTCGIQCNECCPGFEQKKWRQNTNARPFNCEPCNCHGHSN 340
Fly 341 ECKYDEEVNRKGLSLDIHGHYDGGGVCQNCQHNTVGINCNKCKPKYYRPKGKHWNETDVCSPCQC 405
Fly 406 DYFFSTGHCEEETGNCECRAAFQPPSCDSCAYGYYGYPNCRECECNLNGTNGYHCEAESGQQCPC 470
Fly 471 KINFAGAYCKQCAEGYYGFPECKACECNKIGSITNDCNVTTGECKCLTNFGGDNCERCKHGYFNY 535
Fly 536 PTCSYCDCDNQGTESEICNKQSGQCICREGFGGPRCDQCLPGFYNYPDCKPCNCSSTGSSAITCD 600
Fly 601 NTGKCNCLNNFAGKQCTLCTAGYYSYPDCLPCHCDSHGSQGVSCNSDGQCLCQPNFDGRQCDSCK 665
Fly 666 EGFYNFP--SCEDCNCDPAGVIDKFAGCGSVPVGELCKCKERVTGRICNECKPLYWNLNISNTEG 728
Fly 729 CEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRDGTFDLDSASLFGCKDCSCDVGGSW 793
Fly 794 QSVCDKISGQCKCHPRITGLACTQPLTTHFFPTLHQFQYEYEDGSLPSGTQVRYDYDEAAFPGFS 858
Fly 859 SKGYVVFNAIQNDVRNEVNVFKSSLYRIVLRYVNPNAENVTATISVTSDNPLEVDQHVKVLLQPT 923
Fly 924 SEPQFVTVAGPLGVKPSAIVLDPGRYVFTTKANKNVMLDYFVLLPAAYYEAGILTRHISNPCELG 988
Fly 989 NMELCRHYKYASVEVFSPAATPFVIGENSKPTNPVETYTDPEHLQIVSHVGDIPVLSGSQNELHY 1053
Fly 1054 IVDVPRSGRYIFVIDYISDRNFPDSYYINLKLKDNPDSETSVLLYPCLYSTICRTSVNEDGMEKS 1118
Fly 1119 FYINKEDLQPVIISADIEDGSRFPIISVTAIPVDQWSIDYINPSPVCVIHDQQCATPKFRSVPDS 1183
Fly 1184 KKIEFETDHEDRIATNKPPYASLDERVKLVHLDSQNEATIVIESKVDATKPNLFVILVKYYQPSH 1248
Fly 1249 PKYQVYYTLTAGKNQYDGKFDIQHCPSSSGCRGVIRPAGEGSFEIDDEFKFTITTDRSQSVWLDY 1313
Fly 1314 LVVVPLKQYNDDLLVEETFDQTKEFIQNCGHDHFHITHNASDFCKKSVFSLTADYNSGALPCNCD 1378
Fly 1379 YAGSTSFECHPFGGQCQCKPNVIERTCGACRSRYYGFPDCKPCKCPNSAMCEPTTGECMCPPNVI 1443
Fly 1444 GDLCEKCAPNTYGFHQVIGCEECACNPMGIANGNSQCDLFNGTCECRQNIEGRACDVCSNGYFNF 1508
Fly 1509 PHCEQCSCHKPGTELEVCDKIDGACFCKKNVVGRDCDQCVDGTYNLQESNPDGCTTCFCFGKTSR 1573
Fly 1574 CDSAYLRVYNVSLLKHVSITTPEFHEESIKFDMWPVPADEILLNETTLKADFTLREVNDERPAYF 1638
Fly 1639 GVLDYLLNQNNHISAYGGDLAYTLHFTSGFDGKYIVAPDVILFSEHNALVHTSYEQPSRNEPFTN 1703
Fly 1704 RVNIVESNFQTISGKPVSRADFMMVLRDLKVIFIRANYWEQTLVTHLSDVYLTLADEDADGTGEY 1768
Fly 1769 QFLAVERCSCPPGYSGHSCEDCAPGYYRD--PSGPYGGYCIPCECNGHSETCDCATGICSKCQHG 1831
Fly 1832 TEGDHCERCVSGYYGNATNGTPGDCMICACPLPFDSNNFATSC-EISESGDQIHCECKPGYTGPR 1895
Fly 1896 CESCANGFYGEPESI---GQVCKPCECSGNINPEDQGSCDTRTGECLRCLNNTFGAACNLCAPGF 1957
Fly 1958 YGDAIKLK---NCQSCDCDDLGT----QTCDPFVGVCTCHENVIGDRCDRCKPDHYGFESGVGCR 2015
Fly 2016 ACDC-GAASNSTQCDPHTGHCACKSGVTGRQCDRCAVDHWKYEKDGCTPCNCNQGYSRGFGCNPN 2079
Fly 2080 TGKCQCLPGVIGDRCDACPNRWVLIKD-EGCQECNNCHHALLDVTDRMRYQI------------- 2130
Fly 2131 -----------------------------DSVLEDFNS----VTLAFFTSQKLN----------- 2151
Fly 2152 -YYDQLADELEPKVK---------------LLDPNSVDLSPSKKAN--SELESDAKSYAKQVNQT 2198
Fly 2199 LANAFDIRERSSTT---LGNI---TVAYDEAVKSADQAKEAIASVEALSKNLEAAASTKIDAALE 2257
Fly 2258 QAQHILGQINGTSIELTPNEQVLEKARKLYEEVNTLVLPIKAQNKSLNALKNDIGEFSDHL--ED 2320
Fly 2321 LFNWSEASQAKSADVERRNVANQKAFDNSKFDTVSEQKLQAEKNIKDAGNFLINGDLTL------ 2379
Fly 2380 -----------------NQINQKLDNLRDALNELNSFNKNVDEELPVREDQHKEADALTDQAEQK 2427
Fly 2428 AAELAIKAQDLAAQYTDMTASAEPAIKAATAYSGIVEAVEAAQKLSQDAISAAGNATDKTDGIEE 2492
Fly 2493 RAHLADTGSTDLLQRARQSLQKVQDDLE--PRLNASAGKVQKISAVNNATEHQLKDINKLIDQLP 2555
Fly 2556 AESQRD-MWKNSNANASDALEILKNVLEILEPVSVQTPKELEKAHGINRDLDLTNKDVSQANKQL 2619
Fly 2620 DDVEGSVSKLSELAED 2635 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanA | NP_476617.1 | LamNT | 18..271 | CDD:214532 | 74/252 (29%) |
EGF_Lam | 272..>314 | CDD:238012 | 22/43 (51%) | ||
EGF_Lam | 332..389 | CDD:238012 | 22/56 (39%) | ||
EGF_Lam | 402..443 | CDD:238012 | 0/40 (0%) | ||
EGF_Lam | 448..491 | CDD:238012 | 0/42 (0%) | ||
Laminin_EGF | 495..543 | CDD:278482 | 0/47 (0%) | ||
Laminin_EGF | 541..589 | CDD:278482 | 6/47 (13%) | ||
Laminin_EGF | 587..634 | CDD:278482 | 8/46 (17%) | ||
EGF_Lam | 631..673 | CDD:238012 | 10/43 (23%) | ||
Laminin_EGF | 677..729 | CDD:278482 | 5/51 (10%) | ||
Laminin_EGF | 732..782 | CDD:278482 | 18/49 (37%) | ||
EGF_Lam | 785..828 | CDD:238012 | 9/42 (21%) | ||
CBM6-CBM35-CBM36_like | 831..966 | CDD:271143 | 10/134 (7%) | ||
Laminin_EGF | 1375..1423 | CDD:278482 | 2/47 (4%) | ||
EGF_Lam | 1420..1457 | CDD:238012 | 0/36 (0%) | ||
Laminin_EGF | 1466..1516 | CDD:278482 | 0/49 (0%) | ||
Laminin_EGF | 1514..1562 | CDD:278482 | 6/47 (13%) | ||
LamB | 1632..1760 | CDD:214597 | 11/127 (9%) | ||
Laminin_EGF | <1775..1801 | CDD:278482 | 15/27 (56%) | ||
EGF_Lam | 1808..1851 | CDD:238012 | 25/42 (60%) | ||
EGF_Lam | 1859..1907 | CDD:214543 | 18/48 (38%) | ||
EGF_Lam | 1916..1968 | CDD:238012 | 25/54 (46%) | ||
EGF_Lam | 1969..2015 | CDD:238012 | 16/49 (33%) | ||
EGF_Lam | 2016..>2054 | CDD:238012 | 18/38 (47%) | ||
EGF_Lam | 2063..>2097 | CDD:238012 | 12/33 (36%) | ||
Laminin_I | 2129..2385 | CDD:283627 | 60/361 (17%) | ||
Tar | 2278..2662 | CDD:223910 | 75/386 (19%) | ||
Laminin_II | 2566..2700 | CDD:283628 | 18/70 (26%) | ||
LamG | 2674..2843 | CDD:238058 | |||
LamG | 2878..3029 | CDD:238058 | |||
LamG | 3078..3205 | CDD:214598 | |||
LamG | 3349..3512 | CDD:238058 | |||
LamG | 3535..3689 | CDD:238058 | |||
LAMC3 | XP_011516423.1 | Laminin_N | 44..269 | CDD:278484 | 71/245 (29%) |
EGF_Lam | 270..317 | CDD:238012 | 24/52 (46%) | ||
Laminin_EGF | 327..383 | CDD:278482 | 27/253 (11%) | ||
EGF_Lam | 382..428 | CDD:238012 | 19/90 (21%) | ||
Laminin_EGF | 430..477 | CDD:278482 | 23/104 (22%) | ||
Laminin_B | 541..662 | CDD:278481 | 51/733 (7%) | ||
EGF_Lam | 706..753 | CDD:238012 | 27/48 (56%) | ||
EGF_Lam | 754..802 | CDD:238012 | 19/54 (35%) | ||
Laminin_EGF | 810..857 | CDD:278482 | 25/46 (54%) | ||
EGF_Lam | 865..915 | CDD:238012 | 16/49 (33%) | ||
Laminin_EGF | 917..965 | CDD:278482 | 20/47 (43%) | ||
EGF_Lam | 964..1011 | CDD:238012 | 15/47 (32%) | ||
PspA_IM30 | 1191..1426 | CDD:281941 | 50/264 (19%) | ||
ATP-synt_B | <1360..1453 | CDD:304375 | 21/100 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |