DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanA and LOC101885031

DIOPT Version :9

Sequence 1:NP_476617.1 Gene:LanA / 38723 FlyBaseID:FBgn0002526 Length:3712 Species:Drosophila melanogaster
Sequence 2:XP_005174519.2 Gene:LOC101885031 / 101885031 -ID:- Length:604 Species:Danio rerio


Alignment Length:668 Identity:190/668 - (28%)
Similarity:278/668 - (41%) Gaps:147/668 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLVILAIS-YCQAE-------LTPPYFNLATGRK--IYATATCGQDTDGPELYCKLVGANTEHDH 65
            ||.:.|:| .|.|:       ..|...:|..||:  :.|::|||  ..|.|:.|      :.|  
Zfish     6 LLSLAALSAMCSAQQDCRRGACYPAMDDLLLGREQNLRASSTCG--LMGSEVVC------SPH-- 60

  Fly    66 IDYSVIQGQ---VCDYCDPTVPE--RNHPPENAID--GTEAWWQSPPLSRGMKFNEVNLTINFEQ 123
                   ||   .|..||...|.  ..|..:|.|.  |...||||.     ...|.|.|.::...
Zfish    61 -------GQWKMKCCPCDSRNPAAYNAHTIQNVISSAGPNRWWQSK-----KDVNPVTLQLDLNG 113

  Fly   124 EFHVAYLFIRMGNSPRPGLWTLEKSTDYGKTWTPWQHFSDTPADCETYFGK----------DTY- 177
            ::|:..:|:.. ..|||....:|:|.|||::|.|..:.:   .:|.:.|.:          :|| 
Zfish   114 QYHLETVFLSF-KGPRPDALIIERSRDYGRSWQPVLYMA---TNCPSTFPRVSTSFPRSFEETYC 174

  Fly   178 --KPITRDDDVICTTEYSKIVPLENGEIPVMLLNERPSSTNYFNSTVLQEWTRATNVRIRLLRTK 240
              .|.|.||            |.::.:|....|.:. :..|..|...::..:..|.:|:.|.:  
Zfish   175 YTLPSTADD------------PYKDQKIHFYPLRQF-ADINLPNEYKIEVASGFTGLRVNLTQ-- 224

  Fly   241 NLLGHLMSVARQDPTVTRRYFYSIKDISIGGRCMCNGHADTC--DVKD---PKSPVRILACRCQH 300
              ||.:.|:    |......:|:::::.:.|.|.|:|||:.|  |..:   |.:||..: |.|||
Zfish   225 --LGPVPSL----PGRGLSQYYALREMKVIGSCFCHGHANRCLQDTSNNYLPNTPVGGM-CECQH 282

  Fly   301 HTCGIQCNECCPGFEQKKWRQNTNARPFNCEPCNCHGHSNECKYD-EEVNRKGLSLDIHGHYDGG 364
            :|.|:.|:.|...:....||...:.....|:.|.|:.||..|.:| |.....|.|        .|
Zfish   283 NTAGVNCDRCDDFYNDLPWRPAESGNTHACKRCECNNHSERCHFDPERYEATGRS--------SG 339

  Fly   365 GVCQNCQHNTVGINCNKCKPKYYRPKGKHWNETDVCSPCQCDYFFST--GHCEEETGNCECRAAF 427
            |||..|.|:|.|..|.:|:..||..........|.|..|.||...|.  |.|:..||.|.|:...
Zfish   340 GVCDACAHHTTGPQCERCERNYYPNPLSDMRSADACLRCLCDPAGSENGGQCDAGTGVCVCKQNV 404

  Fly   428 QPPSCDSCAYGYYGYPNCRECECNLNGTNGYHCEAESGQQCPCKINFAGAYCKQCAEGYYGFPEC 492
            :...||.|..|:|          |||..|..                                .|
Zfish   405 EGERCDRCKAGFY----------NLNANNPL--------------------------------GC 427

  Fly   493 KACECNKIGSITNDCNVTTGECKCLTNFGGDNCERCKHGYFNYPT----CSYCDCDNQGTESEIC 553
            ..|.|:.:||::..||..||:|.|.:|..|.:|:||..||:| ||    |..|.||.....|..|
Zfish   428 SKCSCSSVGSLSGVCNQLTGQCVCRSNMEGLSCDRCAAGYWN-PTSPSGCQPCGCDPDNARSATC 491

  Fly   554 NKQSGQCICREGFGGPRCDQCLPGFYNYP--DCKPCNCSSTGSSAITCD-NTGKCNCLNNFAGKQ 615
            ::::|||.||.|.||..|..|....|..|  .|:.|:|...|:.|  || .||.|.|.....|.:
Zfish   492 DQRTGQCQCRPGNGGRTCSGCPDNTYGDPLIGCRRCDCDQLGTEA--CDKRTGVCRCKPGVTGPR 554

  Fly   616 CTLCTAGY-YSYPDCLPC 632
            |..|:.|: .|:|.|..|
Zfish   555 CDACSRGHCASFPQCPAC 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanANP_476617.1 LamNT 18..271 CDD:214532 65/282 (23%)
EGF_Lam 272..>314 CDD:238012 18/46 (39%)
EGF_Lam 332..389 CDD:238012 21/57 (37%)
EGF_Lam 402..443 CDD:238012 15/42 (36%)
EGF_Lam 448..491 CDD:238012 4/42 (10%)
Laminin_EGF 495..543 CDD:278482 22/51 (43%)
Laminin_EGF 541..589 CDD:278482 19/49 (39%)
Laminin_EGF 587..634 CDD:278482 18/48 (38%)
EGF_Lam 631..673 CDD:238012 1/2 (50%)
Laminin_EGF 677..729 CDD:278482
Laminin_EGF 732..782 CDD:278482
EGF_Lam 785..828 CDD:238012
CBM6-CBM35-CBM36_like 831..966 CDD:271143
Laminin_EGF 1375..1423 CDD:278482
EGF_Lam 1420..1457 CDD:238012
Laminin_EGF 1466..1516 CDD:278482
Laminin_EGF 1514..1562 CDD:278482
LamB 1632..1760 CDD:214597
Laminin_EGF <1775..1801 CDD:278482
EGF_Lam 1808..1851 CDD:238012
EGF_Lam 1859..1907 CDD:214543
EGF_Lam 1916..1968 CDD:238012
EGF_Lam 1969..2015 CDD:238012
EGF_Lam 2016..>2054 CDD:238012
EGF_Lam 2063..>2097 CDD:238012
Laminin_I 2129..2385 CDD:283627
Tar 2278..2662 CDD:223910
Laminin_II 2566..2700 CDD:283628
LamG 2674..2843 CDD:238058
LamG 2878..3029 CDD:238058
LamG 3078..3205 CDD:214598
LamG 3349..3512 CDD:238058
LamG 3535..3689 CDD:238058
LOC101885031XP_005174519.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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