DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LanA and XB5969698

DIOPT Version :9

Sequence 1:NP_476617.1 Gene:LanA / 38723 FlyBaseID:FBgn0002526 Length:3712 Species:Drosophila melanogaster
Sequence 2:NP_001123798.1 Gene:XB5969698 / 100170549 XenbaseID:XB-GENE-5969699 Length:1853 Species:Xenopus tropicalis


Alignment Length:2870 Identity:594/2870 - (20%)
Similarity:896/2870 - (31%) Gaps:1249/2870 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PPYFNLATGR--KIYATATCGQDTDGPELYCKLVGANTEHDHIDYSVIQGQVCDYCDPTVP--ER 86
            |...||..||  .:.||:|||.:.  .:.||.:       .|:..|    :.|..||..||  :.
 Frog    55 PATGNLLIGRAQSLSATSTCGMEE--AQEYCIV-------SHLQDS----EKCFACDSRVPYQKE 106

  Fly    87 NHPPENAI-----DGTEAWWQSPPLSRGMKFNEVNLTINFEQEFHVAYLFIRMGNSPRPGLWTLE 146
            :|..||.|     |..:.||||   ..|::  .|::.::.|.|||..:|.::. .:.||....:|
 Frog   107 SHRIENVIYLTEEDEEKTWWQS---ENGVE--SVSIRLDLEAEFHFTHLIMKF-KTFRPAAMLIE 165

  Fly   147 KSTDYGKTWTPWQHFSDTPADCETYFGKDTYKPITRDDDVICTTEYSKIVPLENGEIPVMLLN-- 209
            :|.|||:||..:::||   .:|...|.......:.:.||:||...||.|.|...||:...:|:  
 Frog   166 RSADYGRTWKVYRYFS---YNCTKMFPGVPIHALQQIDDIICDQRYSDIEPSSEGEVIYKVLDPA 227

  Fly   210 ---ERPSSTNYFNSTVLQEWTRATNVRIRLLRTKNLLGHLMSVARQDPTVTRRYFYSIKDISIGG 271
               |.|.|..      :||..:.||:||...:...|..:|:.   |.|.|.::|:||:.::.:.|
 Frog   228 ITVEDPYSAE------IQELLQITNLRINFTKLHTLGDNLLD---QRPEVLQKYYYSVYELVVRG 283

  Fly   272 RCMCNGHADTCDVKDPKSPVRIL----------ACRCQHHTCGIQCNECCPGFEQKKWRQNTNAR 326
            .|.|.|||..|      |||..:          .|.|:|||.|:.|.:|...:....||......
 Frog   284 SCFCYGHASEC------SPVEGIEAGVEGMIHGRCVCKHHTKGLNCEQCQDFYHDLPWRPAEAND 342

  Fly   327 PFNCEPCNCHGHSNECKYDEEVNRKGLSLDIHGHYDGGGVCQNCQHNTVGINCNKCKPKYYRPKG 391
            |..|:.|||:.||.:|.:|       :::.:....:.||||.:|||||:|.||..|||.||    
 Frog   343 PHTCKRCNCNNHSRKCHFD-------MAVYLATGKESGGVCDDCQHNTMGRNCELCKPFYY---- 396

  Fly   392 KHWNETDVCSPCQCDYFFSTGHCEEETGNCECRAAFQPPSCDSCAYGYYGYPNCRECECNLNGTN 456
                                                |.|..|                  :...|
 Frog   397 ------------------------------------QDPRAD------------------IRADN 407

  Fly   457 GYHCEAESGQQCPCKINFAGAYCKQCAEGYYGFPECKACECNKIGSITNDCNVTTGECKCLTNFG 521
            .                                  |.:|:|:.:||:.                 
 Frog   408 A----------------------------------CISCDCDPVGSLD----------------- 421

  Fly   522 GDNCERCKHGYFNYPTCSYCDCDNQGTESEICNKQSGQCICREGFGGPRCDQCLPGFYNYPDCKP 586
                                                         ||.                 
 Frog   422 ---------------------------------------------GGV----------------- 424

  Fly   587 CNCSSTGSSAITCDNTGKCNCLNNFAGKQCTLCTAGYYSYPDCLPCHCDSHGSQGVSCNSDGQCL 651
                                                           ||||.:..:...: |||.
 Frog   425 -----------------------------------------------CDSHTNVNLGMIA-GQCR 441

  Fly   652 CQPNFDGRQCDSCKEGFY----NFP-SCEDCNCDPAGVIDKFAGCGSVPVGEL---CKCKERVTG 708
            |:.|..|.:||||||.||    |.| .|:.|:|||.|:|     .|:.|..::   |.||..|||
 Frog   442 CKGNVKGERCDSCKESFYGLSMNDPVGCQPCSCDPRGII-----TGNTPCDQISGDCYCKRFVTG 501

  Fly   709 RICNECKPLYWNLNISNTEGCEICDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRDGTFD 773
            |.||:|.|.||.|                                                    
 Frog   502 RYCNQCLPEYWGL---------------------------------------------------- 514

  Fly   774 LDSASLFGCKDCSCDVGGSWQSVCDKISGQCKCHPRITGLACTQPLTTHFFPTLHQFQYEYEDGS 838
              |..:.||:.|.||.||::.:.|....|||.|...|.|..|......:|...|..:.||.|   
 Frog   515 --SNDITGCRPCDCDFGGAYNNKCSLGDGQCDCRSNIIGRQCGDVQLGYFCMPLDYYTYEAE--- 574

  Fly   839 LPSGTQVRYDYDEAAFPGFSSKGYVVFNAIQNDVRNEVNVFKSSLYRIVLRYVNPNAENVTATIS 903
                               ::||                                          
 Frog   575 -------------------NAKG------------------------------------------ 578

  Fly   904 VTSDNPLEVDQHVKVLLQPTSEPQFVTVAGPLGVKPSAIVLDPGRYVFTTKANKNVMLDYFVLLP 968
                            |.|| :||.     |...||.|               :...|:||    
 Frog   579 ----------------LSPT-DPQL-----PGSPKPEA---------------QTDCLEYF---- 602

  Fly   969 AAYYEAGILTRHISNPCELGNMELCRHYKYASVEVFSPAATPFVIGENSKPTNPVETYTDPEHLQ 1033
                          |..:.|.....|..:          .|..|:.:.:......:....|    
 Frog   603 --------------NGIQNGKKVRLRRQR----------RTARVLQQRASQRRARQLQQKP---- 639

  Fly  1034 IVSHVGDIPVLSGSQNELHYI-------VDVPRSGRYIFVIDYISDRNFPDSYYINLKLKDNPDS 1091
                  |..|:....|..|.:       |.|......:|.||.:.   :|..|  ::.::..|:|
 Frog   640 ------DTEVIRREHNSGHMVTWTGQGFVRVRDGAGLLFQIDNVP---YPMDY--DIMIRYEPES 693

  Fly  1092 ETSVLLYPCLYSTICRTSVNEDGMEKSFYINKEDLQPVIISADIEDGSRFPIISVTA--IPVDQW 1154
                                           .||.:..              :|||:  :|:   
 Frog   694 -------------------------------AEDWEAT--------------VSVTSRILPM--- 710

  Fly  1155 SIDYINPSPVCVIHDQQCATPKFRSVPDSKKIEFETDHEDRIATNKPPYASLDERVKLVHLDSQN 1219
                   ||.|           ...:|..:..:.:..|.:|......|:.          .:|.|
 Frog   711 -------SPRC-----------GNVLPSEQMYKEKLPHTERYLVLPKPFC----------FESNN 747

  Fly  1220 EATIVIESKVDATKPNLFVILVKYYQPSHPKYQVYYTLTAGKNQYDGKFDIQHCPSSSGCRGVIR 1284
            :..|.|                        ::|.:    ...|::...|                
 Frog   748 QYEISI------------------------RFQRW----GAANRHPAAF---------------- 768

  Fly  1285 PAGEGSFEIDDEFKFTITTDRSQSVWLDYLVVVPLKQY-------NDDLLVEETFDQTKEFIQNC 1342
                                    :.:|.||::| |.|       ||.:.|.    ..:|..:..
 Frog   769 ------------------------ILIDSLVLLP-KIYELPGFHGNDPVSVH----HREEMERYM 804

  Fly  1343 GHDHFHIT--HNASDFCKKSVFSLTADYNSGALPCNCDYAGSTSFECHPFGGQCQCKPNVIERTC 1405
            ..|.|.:.  .:.::.|.|.:.|::|..:.|||||.||..||.|..|...||||:||        
 Frog   805 CLDSFKMATMPDLAEMCIKLLCSISAIIHDGALPCLCDLQGSLSAVCDKIGGQCKCK-------- 861

  Fly  1406 GACRSRYYGFPDCKPCKCPNSAMCEPTTGECMCPPNVIGDLCEKCAPNTYGFHQVIGCEECACNP 1470
                                              |||||..|::|||.||||           .|
 Frog   862 ----------------------------------PNVIGQRCDQCAPGTYGF-----------GP 881

  Fly  1471 MGIANGNSQCDLFNGTCECRQNIEGRACDVCSNGYFNFPHCEQCSCHKPGTELEVCDKIDGACFC 1535
            .|                                      |.:|.||..|:...:|:...|.|.|
 Frog   882 YG--------------------------------------CSKCDCHPQGSTSRLCNPFTGQCPC 908

  Fly  1536 KKNVVGRDCDQCVDGTYNLQESNPDGCTTCFCFGKTSRCDSAYLRVYNVSLLKHVSITTPEFHEE 1600
            :.||.||.||||:.|                                                  
 Frog   909 QSNVAGRQCDQCLPG-------------------------------------------------- 923

  Fly  1601 SIKFDMWPVPADEILLNETTLKADFTLREVNDERPAYFGVLDYLLNQNNHISAYGGDLAYTLHFT 1665
                 .|..|                                                       
 Frog   924 -----QWGYP------------------------------------------------------- 928

  Fly  1666 SGFDGKYIVAPDVILFSEHNALVHTSYEQPSRNEPFTNRVNIVESNFQTISGKPVSRADFMMVLR 1730
                                                                             
 Frog   929 ----------------------------------------------------------------- 928

  Fly  1731 DLKVIFIRANYWEQTLVTHLSDVYLTLADEDADGTGEYQFLAVERCSCPPGYSGHSCEDCAPGYY 1795
                                                                             
 Frog   929 ----------------------------------------------------------------- 928

  Fly  1796 RDPSGPYGGYCIPCECNGHSETCDCATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICA 1860
                     :|.||.|||||:.||..||.|.:|:..|.|.|||:|:.||||:...|:...|..|.
 Frog   929 ---------HCRPCVCNGHSDECDSKTGACIRCRDSTTGRHCEKCLDGYYGDPILGSGQQCRPCP 984

  Fly  1861 CP-LPFDSNNFATSCEISESGDQIHCECKPGYTGPRCESCANGFYGEPESIGQVCKPCECSGNIN 1924
            || .|...|...:||...:...||.|.|.|||||.||:.|:.|::|.||..|..|:||:|:.||:
 Frog   985 CPGYPGSRNYHGSSCYADKDSHQIVCLCAPGYTGTRCDRCSPGYFGNPEQEGGECRPCQCNNNID 1049

  Fly  1925 PEDQGSCDTRTGECLRCLNNTFGAACNLCAPGFYGDAIKLKNCQSCDCDDLGTQT---------C 1980
            |.|..|||:.:|.|::||.||.||.|..|..||||.|:: :||:.|.|::.||..         |
 Frog  1050 PTDPESCDSHSGMCMKCLYNTDGAHCEECKAGFYGSAMQ-RNCRRCTCNEQGTLQSHCTRDVCYC 1113

  Fly  1981 DPFVGVCTCHENVIGDRCDRCKPDHYGFESGVGCRACDCGAASNSTQ-CDPHTGHCACKSGVTGR 2044
            |...|.|.|..||:|..||:|..:.:.|...:||..|.|..|.:..| |:..||.|.|:.|..||
 Frog  1114 DRVTGHCPCRANVLGKSCDQCASNFWNFGGDLGCEPCTCDPAHSLRQDCNVFTGQCHCQPGFGGR 1178

  Fly  2045 QCDRCAVDHWKYEKDGCTPCNCNQGYSRGFGCNPNTGKCQCLPGVIGDRCDAC----PNRWVLIK 2105
            .|..|..::|...:..|..|:|:...|....|:|.||||.|..|..|.|||.|    .|.:    
 Frog  1179 VCSHCQENYWGDPQIKCEVCDCDAYGSETAQCDPLTGKCFCRKGFTGQRCDQCARGFQNNY---- 1239

  Fly  2106 DEGCQECNNCHHALLDVTDRMRYQIDSV---LEDFNSVTLAFFTS--------QKLNYYDQLADE 2159
             ..|..|:.|......:..::|.::..|   |.||....:|...|        .||...::|..:
 Frog  1240 -PRCLPCHECFAQWDMIISQLRDRLQGVQQKLLDFQEGAVAPEISHSQIKELDNKLRTIEELIKD 1303

  Fly  2160 --------LEPKVKLLDPNSVDLSPSKKANSELESDAKSYAKQVNQTLANAFDIRERS------- 2209
                    ||...||::..|.::       ::|.....:..||:|.|  .|.|..:|.       
 Frog  1304 GGADGMRMLEQMTKLVNKISSEV-------AQLSFQLHTQEKQMNGT--EAKDRWQRGKLDQLTL 1359

  Fly  2210 STTLGNITVAYD-----EAVKSADQAKEAIASVEALSKNLEAAASTKIDAALEQAQHILGQINGT 2269
            ..|:.|.|| ||     ||:.:|. ..|:..|:  :...||:..:.||         ..|.:.|.
 Frog  1360 DITVVNETV-YDLKVQIEAIVAAG-FNESYNSI--VKSYLESTEAEKI---------ANGSVYGP 1411

  Fly  2270 SIELTPNEQVLEKA-RKLYEEVNTLVLPIKAQNKSLNALKN-----DIGEFSDHL---------E 2319
            ...:..::|..|:. |.|.|:::|....:.||..||..|:.     ::.:.::.:         |
 Frog  1412 GSPVFQSQQTREETERLLKEKLDTYKRNMTAQKSSLKELQKKVQGLNVSKINEKICGAPGDQECE 1476

  Fly  2320 DL--------------------------FNWSEASQAKSADVERRNVANQKAFDNSKFDTV---- 2354
            |.                          .:....|.|::..:|..|:||:......|...:    
 Frog  1477 DSPCGGANCRDEDGKRKCGGDDCNGALPVSAKALSTAQNITLELENMANRLKDIAQKIQDIQGIA 1541

  Fly  2355 SEQKLQAEKNIKDAGNFLINGDLTLNQINQKLDNLRDALNELNSF--NKNVDEE----------- 2406
            .:.|:|.|..       |.|...:..:|....:.||:.:.::..|  .:..|.|           
 Frog  1542 QDAKVQTEAT-------LANAKESKRRIEDSTEKLREFIKKIKDFLTEEGADPESIELVARQVLN 1599

  Fly  2407 --LPVREDQHKEADALTDQAEQKAAELAIKAQDLAAQYTDMTASAEPAIKAATAYSGIVEAVEA- 2468
              ||....   :.:||.::.::....|:. ..::....:::.|:|:...|.|.......|||.| 
 Frog  1600 ISLPASPG---DIEALVNKIKESIGNLSC-TDEILTNTSEILATAKNLHKEAVEAQAKAEAVSAN 1660

  Fly  2469 ---AQKLSQDAISAAGNATDKTDGIEERAHLADTGSTDLLQRARQSLQKVQDDLEPRLNASAGKV 2530
               ||.|.|:|.:.|.:|        |:|          |::|:||::.|:..:|..:....|..
 Frog  1661 ISDAQALLQEAEAKAKSA--------EKA----------LKKAKQSIKDVKSKVEQTMQTLTGVE 1707

  Fly  2531 QK----ISAVNNATEHQLKDINKLIDQLPAESQRDMWKNSNANASDALEILKNVLEILEPVSVQT 2591
            ||    :..:.|.:|    .::.|:|:  .||.|.:       ||||.|....||          
 Frog  1708 QKEMDIMERIGNLSE----KVDDLLDK--TESNRQI-------ASDAKERANLVL---------- 1749

  Fly  2592 PKELEKAHGINRDLDLTNKDVSQANKQLDDVEGSVSKLSELAEDIEEQQHRVGSQSRQLG---QE 2653
                              ....:..|::|||:.....|.|          :||..:...|   ..
 Frog  1750 ------------------NSTGELRKEMDDVQRKYDDLKE----------KVGGYNSSSGTALDR 1786

  Fly  2654 IENLKAQVEAARQLANSIKVGVNFKPSTILELKTPEKTKLLATRTNLSTYFRTTEPSGFLLYLGN 2718
            ||.:|.:.:|....||:.|     |....||      .:..|...|::....|.|..        
 Frog  1787 IEKIKEEAKALYDKANTAK-----KELAKLE------AQFRANEANMTAKILTIEQL-------- 1832

  Fly  2719 DNKTAQKNND 2728
            :|:|.|..||
 Frog  1833 ENQTTQLLND 1842

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanANP_476617.1 LamNT 18..271 CDD:214532 76/258 (29%)
EGF_Lam 272..>314 CDD:238012 17/51 (33%)
EGF_Lam 332..389 CDD:238012 24/56 (43%)
EGF_Lam 402..443 CDD:238012 3/40 (8%)
EGF_Lam 448..491 CDD:238012 1/42 (2%)
Laminin_EGF 495..543 CDD:278482 4/47 (9%)
Laminin_EGF 541..589 CDD:278482 2/47 (4%)
Laminin_EGF 587..634 CDD:278482 0/46 (0%)
EGF_Lam 631..673 CDD:238012 20/46 (43%)
Laminin_EGF 677..729 CDD:278482 22/54 (41%)
Laminin_EGF 732..782 CDD:278482 1/49 (2%)
EGF_Lam 785..828 CDD:238012 14/42 (33%)
CBM6-CBM35-CBM36_like 831..966 CDD:271143 17/134 (13%)
Laminin_EGF 1375..1423 CDD:278482 13/47 (28%)
EGF_Lam 1420..1457 CDD:238012 11/36 (31%)
Laminin_EGF 1466..1516 CDD:278482 4/49 (8%)
Laminin_EGF 1514..1562 CDD:278482 17/47 (36%)
LamB 1632..1760 CDD:214597 0/127 (0%)
Laminin_EGF <1775..1801 CDD:278482 0/25 (0%)
EGF_Lam 1808..1851 CDD:238012 23/42 (55%)
EGF_Lam 1859..1907 CDD:214543 21/48 (44%)
EGF_Lam 1916..1968 CDD:238012 26/51 (51%)
EGF_Lam 1969..2015 CDD:238012 17/54 (31%)
EGF_Lam 2016..>2054 CDD:238012 14/38 (37%)
EGF_Lam 2063..>2097 CDD:238012 15/33 (45%)
Laminin_I 2129..2385 CDD:283627 65/331 (20%)
Tar 2278..2662 CDD:223910 88/454 (19%)
Laminin_II 2566..2700 CDD:283628 27/136 (20%)
LamG 2674..2843 CDD:238058 12/55 (22%)
LamG 2878..3029 CDD:238058
LamG 3078..3205 CDD:214598
LamG 3349..3512 CDD:238058
LamG 3535..3689 CDD:238058
XB5969698NP_001123798.1 Laminin_N 62..283 CDD:278484 73/251 (29%)
EGF_Lam 284..337 CDD:238012 18/58 (31%)
Laminin_EGF 349..399 CDD:278482 25/96 (26%)
Laminin_EGF 412..469 CDD:278482 26/183 (14%)
EGF_Lam 471..522 CDD:238012 24/109 (22%)
EGF_Lam 523..>562 CDD:238012 13/38 (34%)
EGF_Lam 839..884 CDD:214543 28/135 (21%)
Laminin_EGF 887..935 CDD:278482 22/296 (7%)
Laminin_EGF 933..980 CDD:278482 23/46 (50%)
Laminin_EGF 983..1039 CDD:278482 24/55 (44%)
Laminin_EGF 1042..>1084 CDD:278482 21/41 (51%)
Laminin_EGF 1094..1147 CDD:278482 16/52 (31%)
Laminin_EGF 1150..1198 CDD:278482 16/47 (34%)
EGF_Lam 1198..1246 CDD:238012 18/52 (35%)
P-loop_NTPase <1253..1328 CDD:304359 15/81 (19%)
SCP-1 <1283..1695 CDD:114219 92/462 (20%)
OspD 1542..1749 CDD:281234 54/248 (22%)
COG1340 1563..1846 CDD:224259 78/372 (21%)
BAR 1668..1853 CDD:299863 57/263 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.