Sequence 1: | NP_476617.1 | Gene: | LanA / 38723 | FlyBaseID: | FBgn0002526 | Length: | 3712 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012826649.2 | Gene: | lamb3 / 100125073 | XenbaseID: | XB-GENE-983491 | Length: | 1157 | Species: | Xenopus tropicalis |
Alignment Length: | 619 | Identity: | 197/619 - (31%) |
---|---|---|---|
Similarity: | 283/619 - (45%) | Gaps: | 93/619 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 LLVILAISYCQAELT-----PPYFNLATGRKIY--ATATCGQDTDGPELYCKLVGANTEHDHIDY 68
Fly 69 SVIQGQVCDYCDPTVP--ERNHPPENAID--GTEAWWQSPPLSRGMKFNEVNLTINFEQEFHVAY 129
Fly 130 LFIRMGNSPRPGLWTLEKSTDYGKTWTPWQHFSDTPADCETYFGKDTYKPITRD-DDVICTTEYS 193
Fly 194 KIVPLENGEI---PVMLLNERPSSTNYFNSTVLQEWTRATNVRIRLLRTKNLLGHLMSVARQDPT 255
Fly 256 VTRRY-----FYSIKDISIGGRCMCNGHADTC------DVKDPKSPVRIL-ACRCQHHTCGIQCN 308
Fly 309 ECCPGFEQKKWRQNTNARPFNCEPCNCHGHSNECKYDEEVNRKGLSLDIHGHYDGGGVCQNCQHN 373
Fly 374 TVGINCNKCKPKYYRPKGKHWNETDVCSPCQCDYFFST--GHCEEETGNCECRAAFQPPSCDSCA 436
Fly 437 YGYY-----GYPNCRECECNLNG-TNGYHCEAESGQQCPCKINFAGAYCKQCAEGYYGFPE---C 492
Fly 493 KACECNKIGSITNDCNVTTGECKCLTNFGGDNCERC-KHGYFNYPT-CSYCDCDNQGTESEICNK 555
Fly 556 QSGQCICREGFGGPRCDQCLPGFYN-YPDCKPCN 588 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanA | NP_476617.1 | LamNT | 18..271 | CDD:214532 | 73/272 (27%) |
EGF_Lam | 272..>314 | CDD:238012 | 17/48 (35%) | ||
EGF_Lam | 332..389 | CDD:238012 | 21/56 (38%) | ||
EGF_Lam | 402..443 | CDD:238012 | 16/47 (34%) | ||
EGF_Lam | 448..491 | CDD:238012 | 16/43 (37%) | ||
Laminin_EGF | 495..543 | CDD:278482 | 18/49 (37%) | ||
Laminin_EGF | 541..589 | CDD:278482 | 22/49 (45%) | ||
Laminin_EGF | 587..634 | CDD:278482 | 1/2 (50%) | ||
EGF_Lam | 631..673 | CDD:238012 | |||
Laminin_EGF | 677..729 | CDD:278482 | |||
Laminin_EGF | 732..782 | CDD:278482 | |||
EGF_Lam | 785..828 | CDD:238012 | |||
CBM6-CBM35-CBM36_like | 831..966 | CDD:271143 | |||
Laminin_EGF | 1375..1423 | CDD:278482 | |||
EGF_Lam | 1420..1457 | CDD:238012 | |||
Laminin_EGF | 1466..1516 | CDD:278482 | |||
Laminin_EGF | 1514..1562 | CDD:278482 | |||
LamB | 1632..1760 | CDD:214597 | |||
Laminin_EGF | <1775..1801 | CDD:278482 | |||
EGF_Lam | 1808..1851 | CDD:238012 | |||
EGF_Lam | 1859..1907 | CDD:214543 | |||
EGF_Lam | 1916..1968 | CDD:238012 | |||
EGF_Lam | 1969..2015 | CDD:238012 | |||
EGF_Lam | 2016..>2054 | CDD:238012 | |||
EGF_Lam | 2063..>2097 | CDD:238012 | |||
Laminin_I | 2129..2385 | CDD:283627 | |||
Tar | 2278..2662 | CDD:223910 | |||
Laminin_II | 2566..2700 | CDD:283628 | |||
LamG | 2674..2843 | CDD:238058 | |||
LamG | 2878..3029 | CDD:238058 | |||
LamG | 3078..3205 | CDD:214598 | |||
LamG | 3349..3512 | CDD:238058 | |||
LamG | 3535..3689 | CDD:238058 | |||
lamb3 | XP_012826649.2 | Laminin_N | 26..244 | CDD:395009 | 72/260 (28%) |
EGF_Lam | 245..302 | CDD:238012 | 20/57 (35%) | ||
EGF_Lam | 311..369 | CDD:238012 | 23/64 (36%) | ||
Laminin_EGF | 375..424 | CDD:395007 | 16/48 (33%) | ||
Laminin_EGF | 427..474 | CDD:395007 | 16/47 (34%) | ||
Laminin_EGF | 477..525 | CDD:395007 | 17/47 (36%) | ||
EGF_Lam | 525..569 | CDD:214543 | 20/43 (47%) | ||
Smc | <815..1149 | CDD:224117 | |||
cc_LAMB_C | 1087..1157 | CDD:424069 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |