DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tnpo and Karybeta3

DIOPT Version :9

Sequence 1:NP_001261472.1 Gene:Tnpo / 38721 FlyBaseID:FBgn0024921 Length:893 Species:Drosophila melanogaster
Sequence 2:NP_001262259.1 Gene:Karybeta3 / 40581 FlyBaseID:FBgn0087013 Length:1105 Species:Drosophila melanogaster


Alignment Length:1182 Identity:211/1182 - (17%)
Similarity:387/1182 - (32%) Gaps:408/1182 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 QQIIAILKESQSPDTATQMAVQMKLEEFNRYPDFNNY-----LIYVLTKLKT--EDEPTRSLSGL 68
            ||::|.|       .:|...|:.:.||     .:||.     :.::|..::.  :.|..|.::.:
  Fly     9 QQLLASL-------LSTDNDVRQQAEE-----AYNNLSRELKVTHLLGNIQNGQQSEEARQMAAV 61

  Fly    69 ILKNNIRMHGTTLQPEIVEYIK-------HECLQAV-----GDASPLIRATVGILITTIASN--- 118
            :|:   |:..|    |..::.|       ::.||.:     .:.:|.:|..:..::..:|.|   
  Fly    62 LLR---RLFTT----EFFDFYKGLPAESQNQLLQQILLAVQQEVTPQLRRKICEVVAEVARNLID 119

  Fly   119 -GGLHNWPQLLPSLCEMLDNQDYNVCEGA---FSALQKIC-EDSAEILDSAALNRPLNIMIPKFL 178
             ...:.||.:|..|.:..::....:.|.|   ||::..|. ...|:.:|.      :..|:.|.:
  Fly   120 EDCNNQWPDILQFLFQCANSPTPQLQESALRIFSSVPSIFGNQEAQYIDL------IKQMLAKSM 178

  Fly   179 EYFKHSSPKIRSHAIACINQFII----NRSQALMLNIDSFIENLFHLSSD-----EDHEVRKNVC 234
            :  ..|.|::|..|:..:..||:    ....|:..:....:..:.|::.:     :|..:.|   
  Fly   179 D--AGSDPEVRVQAVRAVGAFILYHDKENETAIHKHFADMLPRMIHITGETIEAQDDQSLLK--- 238

  Fly   235 HGLVMLLEVRMD---RLMPHMSQIIEYML--LRTQDTDEGVALEASEFWLSLAEQ--SICKDVLA 292
                :|:|:..:   .|.|.:..|.|..:  ..:||.::.......|..:||||.  |:.:....
  Fly   239 ----LLIEMTENCPKFLRPQLEFIFEVCMKVFSSQDFEDSWRHLVLEVMVSLAENAPSMIRKRAD 299

  Fly   293 PYLAQLAPVLVRGMRYSEVDIILLKGNVEEDDMVPDREEDIRPRFHKSRAHTIRSTQEGGAGATG 357
            .|:..|.|:::.                    |:.|.::|                 |..:.|..
  Fly   300 KYIVALIPLILH--------------------MMTDLDDD-----------------ENWSTADV 327

  Fly   358 DDDDDEFEDGMDDDSSLSEWNLRKCSAAALDVLANVFREDCLPVVLPILKETLFHQEWVIKESGV 422
            .||||..::.:..:|||..   ..|......|         ||:|:..|...|.|.:|..:.:.:
  Fly   328 VDDDDHSDNNVIAESSLDR---LACGLGGKIV---------LPLVMNALPVMLGHADWKHRFAAL 380

  Fly   423 LALGAIAEGCMQGMIQHLPELIPYLISCLSDKKALVRSITCWTLSR----YANWVVNQPHDQYLK 483
            :|:.||.|||.:.|...|.|::..:::.|||....||...|..:.:    :|.....:.|.|.:.
  Fly   381 MAISAIGEGCHKQMEAILDEVMSGVLNFLSDPHPRVRYAACNAIGQMSTDFAQTFEKKFHSQVIP 445

  Fly   484 PLM---------------------------EELLKRILD--------------------SNKRVQ 501
            .|:                           :.:|.|.||                    .||.|.
  Fly   446 GLLSLLDDVENPRVQAHAGAALVNFSEDCPKNILTRYLDGIMAKLETILNSKFKELVEKGNKLVL 510

  Fly   502 EAACSAFATLEEEACTELVPYLEYILKTLVFAFSKYQHKN------------------------- 541
            |...:..|::.:...:|.|.|.:.::..|.|..   |:.|                         
  Fly   511 EQVVTTIASVADTCESEFVAYYDRLMPCLKFII---QNANSDDLRMLRGKTIECVSLIGLAVGRE 572

  Fly   542 ------------LLILYDAVGTLADS-----------------VGHHLNKPQYIDILMPPL---- 573
                        ||:.:...|.|||.                 :|....  ||:.::|.|:    
  Fly   573 KFIGDAGEVMDMLLVNHTEGGELADDDPQTSYLITAWARMCKILGKQFE--QYLPLVMGPVMRTA 635

  Fly   574 ----------------ID---KWNLLK--------------DDDKDLFPLLECLSSIATALQSGF 605
                            ||   .|:.:.              ||......:|.|   .|..|:.||
  Fly   636 TMKPEVAMLDNDEVEDIDGDVDWSFINLGEQQNFAIRTAGMDDKASACEMLVC---YARELKEGF 697

  Fly   606 LPYCDPVYRRCISLIE-------QTINQEML-----CKQNQTYDH---------PDKERMIVA-- 647
            ..|.:.|.|:.:.:::       :|...|.|     |.:.:...:         |:..::||.  
  Fly   698 AEYAEDVVRQMLPMLKFYFHDGVRTAAAESLPYLLDCAKIKGPQYLEGMWMFICPELLKVIVTEP 762

  Fly   648 -LDLLSGLAEGLDRHIETLVANS------------------------------------------ 669
             .|:.|.|...|.:.||||..|.                                          
  Fly   763 EPDVQSELLNSLAKCIETLGPNCLNEDAMKQVLEIINKYVLEHFERADKRLAARNEEDYDDGVEE 827

  Fly   670 -----------------NIMHLLYQ--------CMQDVLPEV------------RQSSFALLGDL 697
                             :|.|.|:|        ..:.|.|..            ||....:..||
  Fly   828 ELAEQDDTDVYILSKIVDITHALFQTNKAQFLPAFEQVAPHFVKLLEPSRPVADRQWGLCVFDDL 892

  Fly   698 TKACFPHVHPFMADFFPILGQNLNPDFISVCNNATWAIGEICMKLGEETKQYIRLVLSDLFIIIN 762
            .:.|.|...|:...|.|.|.|.:......|...|.:..|.:....||:.......::..|..:||
  Fly   893 IEFCGPACAPYQQIFTPALVQYVCDKAPEVRQAAAYGCGVLGQFAGEQFAHTCAQIIPLLVQVIN 957

  Fly   763 RPNTPKTLLENTAITIGRLGYVCPV-----EVAPYLPEFVRQWCTSLRHIRDNDEKDSAFRGMCH 822
            .|...:  :||.:.|...:.....:     .....:.|.:..|.:.|....|::|....:..:|.
  Fly   958 DPKARE--IENISPTENAISAFAKILKYNNSALSNVDELIGVWFSWLPVSEDSEEAAHIYGYLCD 1020

  Fly   823 MITVNPAGVVADFIFFCDAIASWVNPPEDLHQMIQKILHGFKTQVGEENWR---------RFVEQ 878
            :|..|...::.         |:..|.|    :::..|...|.|:|.|....         :.||.
  Fly  1021 LIEGNHPVILG---------ANNGNLP----RIVSIIAESFCTKVVEAQSATGTRMLTIVKQVES 1072

  Fly   879 FPPTLAERLTTM 890
            .|..:|...:|:
  Fly  1073 NPEVMAACASTL 1084

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TnpoNP_001261472.1 IBN_N 32..99 CDD:281761 14/85 (16%)
ARM 127..234 CDD:237987 21/119 (18%)
HEAT repeat 127..155 CDD:293787 7/31 (23%)
HEAT repeat 172..202 CDD:293787 8/33 (24%)
HEAT repeat 213..239 CDD:293787 3/30 (10%)
HEAT repeat 252..281 CDD:293787 5/30 (17%)
HEAT_2 399..507 CDD:290374 34/158 (22%)
HEAT repeat 402..430 CDD:293787 8/27 (30%)
HEAT_EZ 415..469 CDD:290247 16/57 (28%)
HEAT repeat 442..472 CDD:293787 8/33 (24%)
HEAT repeat 481..510 CDD:293787 9/75 (12%)
HEAT repeat 670..702 CDD:293787 10/51 (20%)
HEAT repeat 711..737 CDD:293787 6/25 (24%)
Karybeta3NP_001262259.1 HEAT repeat 129..157 CDD:293787 6/27 (22%)
HEAT repeat 165..216 CDD:293787 10/58 (17%)
HEAT repeat 235..261 CDD:293787 6/32 (19%)
HEAT repeat 272..305 CDD:293787 7/32 (22%)
HEAT repeat 357..385 CDD:293787 8/27 (30%)
HEAT_2 364..467 CDD:290374 23/102 (23%)
HEAT_EZ 373..427 CDD:290247 16/53 (30%)
HEAT repeat 401..429 CDD:293787 6/27 (22%)
ARM 405..503 CDD:237987 14/97 (14%)
HEAT repeat 442..473 CDD:293787 2/30 (7%)
HEAT repeat 485..519 CDD:293787 4/33 (12%)
HEAT repeat 532..565 CDD:293787 4/35 (11%)
HEAT repeat 867..894 CDD:293787 5/26 (19%)
HEAT repeat 906..936 CDD:293787 7/29 (24%)
HEAT repeat 947..979 CDD:293787 7/33 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438713
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10527
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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