DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sf3b6 and Sf3b6

DIOPT Version :10

Sequence 1:NP_648037.1 Gene:Sf3b6 / 38720 FlyBaseID:FBgn0035692 Length:121 Species:Drosophila melanogaster
Sequence 2:NP_001258151.1 Gene:Sf3b6 / 100365504 RGDID:2318878 Length:125 Species:Rattus norvegicus


Alignment Length:115 Identity:89/115 - (77%)
Similarity:105/115 - (91%) Gaps:0/115 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KRNHIRLPPEVNRLLYVRNLPYKITSDEMYDIFGKFGAIRQIRVGNTPETRGTAFVVYEDIFDAK 67
            ||.:|||||||||:||:||||||||::||||||||:|.||||||||||||||||:||||||||||
  Rat     7 KRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAK 71

  Fly    68 NACDHLSGFNVCNRYLVVLYYQSNKAFKRVDMDKKQEELNNIKAKYNLKT 117
            |||||||||||||||||||||.:|:||:::|..||:|:|..:|.||.:.|
  Rat    72 NACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGINT 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sf3b6NP_648037.1 RRM_SF3B14 13..89 CDD:409687 68/75 (91%)
Sf3b6NP_001258151.1 RRM_SF3B14 17..93 CDD:409687 68/75 (91%)

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