DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7386 and sna

DIOPT Version :10

Sequence 1:NP_648036.1 Gene:CG7386 / 38719 FlyBaseID:FBgn0035691 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_476732.1 Gene:sna / 34908 FlyBaseID:FBgn0003448 Length:390 Species:Drosophila melanogaster


Alignment Length:311 Identity:71/311 - (22%)
Similarity:109/311 - (35%) Gaps:91/311 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 MGVFESIADDSEAPER---------PEEPASFDPLLNNKLEMIDNEEDVFKLLEKVDKELEE--H 144
            :..|.|.|....:|:.         |..|.|       .||.....||   |..:.|..|..  |
  Fly   148 LAAFPSPASSMASPQSVYSYQQMTPPSSPGS-------DLETGSEPED---LSVRNDIPLPALFH 202

  Fly   145 SRDQSEEHFSSAEHNGLEEEKKESEGFNSDDEQAMGQRRIANDKRKLFRLMSCSICQQKFKKQSK 209
            ..|:::...|.|       ....|.|::.....:.....:|.:..|.:| ..|..||:.:.....
  Fly   203 LFDEAKSSSSGA-------SVSSSSGYSYTPAMSASSASVAANHAKNYR-FKCDECQKMYSTSMG 259

  Fly   210 FEEHMKHHNDLLPFQCQE-------ESCRKGFTTAGALRLHVDYAHSKKEDTVPCTVEGCQLVFS 267
            ..:|.:.|....  :|.:       |.|.|.:||.|||::|:      :..|:||          
  Fly   260 LSKHRQFHCPAA--ECNQEKKTHSCEECGKLYTTIGALKMHI------RTHTLPC---------- 306

  Fly   268 RLRLLTIHLKKVHNQARVIAPRGEQSCKECGVVFRCPVAMKKHMYTHTGEELPYPCTICGKGFYI 332
                                     .|..||..|..|..::.|:.|||||: |:.|..|.:.|..
  Fly   307 -------------------------KCPICGKAFSRPWLLQGHIRTHTGEK-PFQCPDCPRSFAD 345

  Fly   333 NSALKNHLLRHAGIKNYVCQYCGVRKTTRQEWSKHILI--HTQRNQFKCRI 381
            .|.|:.|...|..:|.|.||.|      .:.:|:..|:  |:..|   |.|
  Fly   346 RSNLRAHQQTHVDVKKYACQVC------HKSFSRMSLLNKHSSSN---CTI 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7386NP_648036.1 zf-AD 10..81 CDD:214871
C2H2 Zn finger 197..217 CDD:275368 4/19 (21%)
C2H2 Zn finger 294..314 CDD:275368 6/19 (32%)
C2H2 Zn finger 323..343 CDD:275368 6/19 (32%)
C2H2 Zn finger 351..371 CDD:275368 5/21 (24%)
C2H2 Zn finger 379..400 CDD:275368 2/3 (67%)
C2H2 Zn finger 408..428 CDD:275368
C2H2 Zn finger 436..456 CDD:275368
C2H2 Zn finger 534..555 CDD:275368
C2H2 Zn finger 563..583 CDD:275368
zf-H2C2_2 575..600 CDD:463886
C2H2 Zn finger 591..611 CDD:275368
snaNP_476732.1 SFP1 <245..303 CDD:227516 15/65 (23%)
C2H2 Zn finger 247..267 CDD:275368 4/19 (21%)
C2H2 Zn finger 282..302 CDD:275368 9/25 (36%)
zf-C2H2 306..328 CDD:395048 7/56 (13%)
C2H2 Zn finger 308..328 CDD:275368 6/19 (32%)
zf-H2C2_2 321..344 CDD:463886 9/23 (39%)
zf-C2H2 334..356 CDD:395048 6/21 (29%)
C2H2 Zn finger 336..356 CDD:275368 6/19 (32%)
zf-H2C2_2 348..373 CDD:463886 8/30 (27%)
C2H2 Zn finger 364..380 CDD:275368 5/21 (24%)
Blue background indicates that the domain is not in the aligned region.

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