DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment D19A and PZF1

DIOPT Version :9

Sequence 1:NP_477304.1 Gene:D19A / 38718 FlyBaseID:FBgn0022935 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_015512.1 Gene:PZF1 / 856316 SGDID:S000006390 Length:429 Species:Saccharomyces cerevisiae


Alignment Length:398 Identity:99/398 - (24%)
Similarity:141/398 - (35%) Gaps:111/398 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 EEEELSDSSSESDDSEDG-----TSRGDKPK--------------RKRIPIEER-HLH---RIID 279
            ::|.:..|.|||.:|.:.     :|..::||              |..|..|.: .:|   |...
Yeast    17 KQETIPISRSESSESLNSLTSTRSSSSNRPKTYFCDYDGCDKAFTRPSILTEHQLSVHQGLRAFQ 81

  Fly   280 CHICHQKFKKAIRYEEHMKYHNDLLPFQCKVETCKKGFTTANGLRIHIDHAHTELSEVHACIAEG 344
            |..|.:.|.|....|.|:..|:|..||||..  |.||.||...|:.| :..||   :...|..||
Yeast    82 CDKCAKSFVKKSHLERHLYTHSDTKPFQCSY--CGKGVTTRQQLKRH-EVTHT---KSFICPEEG 140

  Fly   345 CGKTFPRVRLLTFHMKKVHGITKAAAPLRDFPCTECDTVFRCPTALKKHMYKHTGEEL--PYPCN 407
            |...|.:...|..|:..||        |....|..|:..|:.|..|:.|:.||...|:  ||.|.
Yeast   141 CNLRFYKHPQLRAHILSVH--------LHKLTCPHCNKSFQRPYRLRNHISKHHDPEVENPYQCT 197

  Fly   408 I--CGKRFVINSALRDHLMR-HAGIKNHVCPYCG---VGKTTRQEWNAHILTHTKE---KKFKCR 463
            .  |.|.|.|.|.|:.|:.. |..:|   ||.|.   ||:...|   .|::.|...   |.:||.
Yeast   198 FAGCCKEFRIWSQLQSHIKNDHPKLK---CPICSKPCVGENGLQ---MHMIIHDDSLVTKNWKCH 256

  Fly   464 QC-DHASHNKQALSNHVKVVHE----------KRKDF--ACQYCGKTFGKS-------------- 501
            .| |.:...|..|..|...:|.          |..|.  ..|..|...|.|              
Yeast   257 ICPDMSFSRKHDLLTHYGSIHTEEDIPLELKYKISDIQQLVQDHGVQLGNSKHSNEQDEEKISNR 321

  Fly   502 -----------------HACKVHERSHTGEK-------------CCECKICGKIFLCEKSLTKHL 536
                             :...:.:|..:||.             .|....|.:.|..::...||:
Yeast   322 LRKRRKLTENNNVEFLQNEVDLEKRLESGENGLNLLLNTVGRKYRCFYNNCSRTFKTKEKYEKHI 386

  Fly   537 KTHEKRDL 544
            ..|:..:|
Yeast   387 DKHKVHEL 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D19ANP_477304.1 zf-AD 12..83 CDD:214871
C2H2 Zn finger 343..362 CDD:275368 6/18 (33%)
C2H2 Zn finger 377..397 CDD:275368 6/19 (32%)
zf-H2C2_2 389..414 CDD:290200 10/28 (36%)
C2H2 Zn finger 406..426 CDD:275368 8/22 (36%)
C2H2 Zn finger 434..454 CDD:275368 7/22 (32%)
C2H2 Zn finger 462..483 CDD:275368 6/21 (29%)
C2H2 Zn finger 491..511 CDD:275368 5/50 (10%)
C2H2 Zn finger 519..539 CDD:275368 4/19 (21%)
C2H2 Zn finger 652..673 CDD:275368
C2H2 Zn finger 681..701 CDD:275368
zf-H2C2_2 694..718 CDD:290200
C2H2 Zn finger 709..729 CDD:275368
tolA_full 724..>814 CDD:274303
PZF1NP_015512.1 COG5048 46..427 CDD:227381 92/369 (25%)
C2H2 Zn finger 54..74 CDD:275368 3/19 (16%)
C2H2 Zn finger 82..102 CDD:275368 6/19 (32%)
C2H2 Zn finger 110..130 CDD:275368 8/22 (36%)
C2H2 Zn finger 136..155 CDD:275368 6/18 (33%)
C2H2 Zn finger 165..185 CDD:275368 6/19 (32%)
C2H2 Zn finger 196..216 CDD:275368 8/19 (42%)
C2H2 Zn finger 224..244 CDD:275368 7/22 (32%)
C2H2 Zn finger 255..277 CDD:275368 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 121 1.000 Inparanoid score I1302
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.