DRSC/TRiP Functional Genomics Resources

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Protein Alignment D19A and plag1

DIOPT Version :9

Sequence 1:NP_477304.1 Gene:D19A / 38718 FlyBaseID:FBgn0022935 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_001034903.1 Gene:plag1 / 561450 ZFINID:ZDB-GENE-060302-2 Length:393 Species:Danio rerio


Alignment Length:381 Identity:97/381 - (25%)
Similarity:146/381 - (38%) Gaps:82/381 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 RKRIPIEERHLHRIIDCHICHQKFKKAIRYEEHMKYHNDLLPFQCKVETCKKGFTTANGLRIHID 328
            |||  .||..:.:...|.:|.:.|....:.:.|...|....|:.|....|.|.|.:...|..|: 
Zfish    19 RKR--REEGKVRKNFSCQLCEKAFNSLEKLKVHSYSHTGERPYHCTHTDCTKAFVSKYKLLRHM- 80

  Fly   329 HAHTELSEVHACIAEGCGKTFPRVRLLTFHMKKVHGITKAAAPLRDFPCTECDTVFRCPTALKKH 393
             |.....:.|.|  ..|.|.|.|...|..|: ..|...|.|     |.|||||..:......::|
Zfish    81 -ATHSPEKTHKC--SYCEKMFHRKDHLKNHL-HTHDPNKEA-----FSCTECDKSYNTKLGFRRH 136

  Fly   394 MYKHTGEELPYPCNICGKRFVINSALRDHLMRHAGIKNHVCPYCGVGKTTRQEWNAHILTHTKEK 458
            ...|..:.....|.:|.:.:.....|.:||..||            ||:.         |.||||
Zfish   137 QALHAAQRGDLTCQVCLQSYPSTPLLLEHLRGHA------------GKSA---------TATKEK 180

  Fly   459 KFKCRQCDHASHNKQALSNHVKVVHEKRKDFACQYCGKTFG-KSHACKVHERSHTGEKCCECKIC 522
            :.:|.||:...:.::.:..|: |||..||||.||||.:.|| |.|..:..::||..|        
Zfish   181 RHQCDQCERRFYTRKDVRRHL-VVHTGRKDFLCQYCAQRFGRKDHLTRHVKKSHAHE-------- 236

  Fly   523 GKIFLCEKSLTKHLKTHEKRDLPPAEPLRQQLNIPMPGQMSVPMPGQMPMQMQTDGLVPMDPNQM 587
               .|..|:  :.:...|.:.||.:.||  .|..|:......|.|   |::.:.:..:    .::
Zfish   237 ---LLRVKA--EPVDLMESQSLPTSGPL--TLRYPLAHASYSPPP---PLRAELESYL----LEL 287

  Fly   588 PSEDMLKACGGGTAAVPPKPKNSRRVQRVDISQLAGTAVNPIPSVSVPSWSPQVNF 643
            .:||              .||.|           :.|.|....:.|:...||..||
Zfish   288 QAED--------------TPKLS-----------SSTTVTGETTSSLDFLSPLFNF 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D19ANP_477304.1 zf-AD 12..83 CDD:214871
C2H2 Zn finger 343..362 CDD:275368 6/18 (33%)
C2H2 Zn finger 377..397 CDD:275368 6/19 (32%)
zf-H2C2_2 389..414 CDD:290200 4/24 (17%)
C2H2 Zn finger 406..426 CDD:275368 5/19 (26%)
C2H2 Zn finger 434..454 CDD:275368 2/19 (11%)
C2H2 Zn finger 462..483 CDD:275368 5/20 (25%)
C2H2 Zn finger 491..511 CDD:275368 8/20 (40%)
C2H2 Zn finger 519..539 CDD:275368 2/19 (11%)
C2H2 Zn finger 652..673 CDD:275368
C2H2 Zn finger 681..701 CDD:275368
zf-H2C2_2 694..718 CDD:290200
C2H2 Zn finger 709..729 CDD:275368
tolA_full 724..>814 CDD:274303
plag1NP_001034903.1 COG5048 29..>99 CDD:227381 17/73 (23%)
C2H2 Zn finger 33..53 CDD:275368 4/19 (21%)
C2H2 Zn finger 61..83 CDD:275368 7/23 (30%)
zf-H2C2_2 76..100 CDD:290200 8/27 (30%)
C2H2 Zn finger 91..111 CDD:275368 7/22 (32%)
C2H2 Zn finger 120..140 CDD:275368 6/19 (32%)
C2H2 Zn finger 149..169 CDD:275368 5/19 (26%)
C2H2 Zn finger 184..204 CDD:275368 5/20 (25%)
C2H2 Zn finger 212..230 CDD:275368 8/17 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24388
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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