DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment D19A and CG6813

DIOPT Version :10

Sequence 1:NP_477304.1 Gene:D19A / 38718 FlyBaseID:FBgn0022935 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster


Alignment Length:274 Identity:68/274 - (24%)
Similarity:106/274 - (38%) Gaps:48/274 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 CHICHQKFKKAIRYEEH--MKYHNDLLPFQCKVETCKKGFTTANGLRIHID--HAHTELSEVHAC 340
            |..|....:.||::.:.  :....:|...:|..:.|    :|...:...||  ...:||.|...|
  Fly    49 CTTCLDNLQAAIKFRQRCIIAEKQNLERIECDSKDC----STDPIIYEDIDDNQIESELDESILC 109

  Fly   341 IAEGCGKTFPRVRLLTFHMKKVHGITKAAAPLRDFPCTECDTVFRCPTALKKHMYKHTGEELPYP 405
                     |.|                    :|.|....:.| ..||:| .|.....|...||.
  Fly   110 ---------PEV--------------------KDLPMPSAEKV-SAPTSL-NHQKSIGGGTGPYV 143

  Fly   406 CNICGKRFVIN--SALRDHLMRHAGIKNHVCPY--CGVGKTTRQEWNAHILTHTKEKKFKCRQCD 466
            |..||:  :||  |..::|.:||.||||..|.:  |.....||:|..:|...||.|:.:.|..|.
  Fly   144 CPDCGR--IINNKSNFQEHTLRHTGIKNFHCVFLNCERSFATRKELTSHTRIHTGEQPYVCVYCP 206

  Fly   467 HASHNKQALSNHVKVVHEKRKDFACQYCGKTFGKSHACKVHERSHTGEKCCECKICGKIFLCEKS 531
            ....:..|...|.: .|...:.:.|..|.|:|..|...:.|:..|...:...|.:|.|.|.....
  Fly   207 RRFSSSGARQEHHR-RHRNERRYECDTCKKSFVSSGCLRKHKMIHVDARNHYCYVCQKHFKRISH 270

  Fly   532 LTKHLKT--HEKRD 543
            |..||.:  |::::
  Fly   271 LMTHLSSNIHKRKE 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D19ANP_477304.1 zf-AD 12..83 CDD:214871
SFP1 <291..363 CDD:227516 13/75 (17%)
C2H2 Zn finger 343..362 CDD:275368 2/18 (11%)
C2H2 Zn finger 377..397 CDD:275368 5/19 (26%)
zf-H2C2_2 389..414 CDD:463886 8/24 (33%)
C2H2 Zn finger 406..426 CDD:275368 7/21 (33%)
C2H2 Zn finger 434..454 CDD:275368 6/21 (29%)
C2H2 Zn finger 462..483 CDD:275368 4/20 (20%)
C2H2 Zn finger 491..511 CDD:275368 6/19 (32%)
C2H2 Zn finger 519..539 CDD:275368 7/21 (33%)
C2H2 Zn finger 652..673 CDD:275368
C2H2 Zn finger 681..701 CDD:275368
zf-C2H2 707..729 CDD:395048
C2H2 Zn finger 709..729 CDD:275368
CG6813NP_001163590.1 zf-AD 5..76 CDD:462262 5/26 (19%)
C2H2 Zn finger 144..164 CDD:275368 7/21 (33%)
C2H2 Zn finger 172..194 CDD:275368 6/21 (29%)
UFD2 <256..>294 CDD:227443 8/29 (28%)
C2H2 Zn finger 258..280 CDD:275368 7/21 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.