DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment D19A and CG8301

DIOPT Version :9

Sequence 1:NP_477304.1 Gene:D19A / 38718 FlyBaseID:FBgn0022935 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster


Alignment Length:612 Identity:137/612 - (22%)
Similarity:230/612 - (37%) Gaps:154/612 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 SLSVEQNDGFPKNLCTLCYTKLNELHDFQKQCVDSVQKFQDLVASNVFACQSSFDVFDPNVAVQD 107
            :|.:..|||.|:.:|:.|:||...::.|:..|.::..|...:           :|..|.:     
  Fly    49 NLKISPNDGLPQKICSDCFTKFCSINAFRLACQEAQLKLSHI-----------YDKIDAS----- 97

  Fly   108 YPAEEEDHVNYDPLLNHKMELIENEEDVFKMLEHVDKEAEEVEKEAKVEEDDGGNVS--VKMFDD 170
              :.|:|.:              .:||:....||.:.|..:.......|.......|  :::|.|
  Fly    98 --SLEDDEI--------------GQEDLEPAEEHQETETTKPTTTVSAETQPNNTASDPIEIFVD 146

  Fly   171 DSSIESGNDNDHDLDFEPNSSDDDIPLAQRMRGPATG-SGPQQDRFSNLDKPKPRPRGR------ 228
            ...|:...:.:.: :.:....|:::      ..|.|. |.|.|...|...|...||:..      
  Fly   147 AVDIDEAEEEEEE-EEQQQQYDEEV------EEPITDESAPPQLTISYACKFCLRPQENYQLQQL 204

  Fly   229 ----------PKKIKPPPPEEEELSDSSS-----ESDDSED-------GTSRGDKPKRKRIPIEE 271
                      |::....|..|....|::|     :|...|.       |...||: ...|..:|:
  Fly   205 LLEHINASHDPEQPYNCPECEARFQDAASRTVHLKSSHVEKQHACGVCGKKYGDR-HNLRHHVEK 268

  Fly   272 RHLHRIIDCHICHQKF--KKAIRYEEHMKYHNDLLPFQCKVETCKKGFTTANGLRIH-IDHAHTE 333
            .|.....:|.:|.::|  :|::.|  |||:||....|:|:...|::.|.:...|..| ..|:.|.
  Fly   269 YHSETDFECALCEKRFYTRKSLNY--HMKWHNPDRQFKCRHSGCERLFISQRHLMCHEATHSGTS 331

  Fly   334 LSEVHACIAEG-CGKTFPRVRLLTFHMKKVHGITKAAAPLRDFPCTECDTVFRCPTALKKHMYKH 397
            ..:...|   | |||||..::.|.:|:.:.||..|      .:.|..|..||......:.||.:.
  Fly   332 SRKSEHC---GFCGKTFIHLKTLRWHIYRQHGGEK------PYKCANCTEVFASYAEKRIHMLER 387

  Fly   398 TGEELP-------------------------------------------------------YPCN 407
            ..|.|.                                                       :.|.
  Fly   388 HRENLTAIERSECMLCRQPFSSEPDLIHHMSAEHLQRPGAPIIANNKRVLQQKRERQYSGLFQCG 452

  Fly   408 ICGKRFVINSALRDHLMRHAGI-----KNHVCPYCGVGKTTRQEWNAHILTHTKEKKFKCRQCDH 467
            .|.:||.:.|||.    |||.:     :.|.||:|.......|:...||.||.|||...|..|..
  Fly   453 SCSQRFNMKSALE----RHAAVHSEKDRPHACPHCSKRFKRAQDMKWHIKTHEKEKPNVCDVCGK 513

  Fly   468 ASHNKQALSNHVKVVHE-KRKDFACQYCGKTFGKSHACKVHERSHTGEKCCECKICGKIFLCEKS 531
            |...|..|:.| ::.|| ..|:|.|..||:.:....:.::|:|:|||:...:|.:|.:.|:....
  Fly   514 AFALKYVLTQH-RLSHEVLEKNFKCNVCGRAYLFEKSLRLHQRTHTGKTYYKCDLCQERFVTHIK 577

  Fly   532 LTKHLKTHEKRDLPPA--EPLRQQLNI 556
            |..|::.......|.:  :||...:||
  Fly   578 LKTHMQKAHAASQPHSADQPLDDLINI 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D19ANP_477304.1 zf-AD 12..83 CDD:214871 12/39 (31%)
C2H2 Zn finger 343..362 CDD:275368 8/19 (42%)
C2H2 Zn finger 377..397 CDD:275368 6/19 (32%)
zf-H2C2_2 389..414 CDD:290200 7/79 (9%)
C2H2 Zn finger 406..426 CDD:275368 7/19 (37%)
C2H2 Zn finger 434..454 CDD:275368 6/19 (32%)
C2H2 Zn finger 462..483 CDD:275368 6/20 (30%)
C2H2 Zn finger 491..511 CDD:275368 5/19 (26%)
C2H2 Zn finger 519..539 CDD:275368 5/19 (26%)
C2H2 Zn finger 652..673 CDD:275368
C2H2 Zn finger 681..701 CDD:275368
zf-H2C2_2 694..718 CDD:290200
C2H2 Zn finger 709..729 CDD:275368
tolA_full 724..>814 CDD:274303
CG8301NP_649915.1 zf-AD 3..87 CDD:285071 11/37 (30%)
COG5048 198..>508 CDD:227381 73/325 (22%)
C2H2 Zn finger 221..241 CDD:275368 4/19 (21%)
C2H2 Zn finger 249..269 CDD:275368 5/20 (25%)
C2H2 Zn finger 277..297 CDD:275368 8/21 (38%)
C2H2 Zn finger 305..327 CDD:275368 5/21 (24%)
C2H2 Zn finger 338..359 CDD:275368 9/23 (39%)
C2H2 Zn finger 367..384 CDD:275368 4/16 (25%)
C2H2 Zn finger 400..420 CDD:275368 0/19 (0%)
C2H2 Zn finger 451..471 CDD:275368 10/23 (43%)
C2H2 Zn finger 480..500 CDD:275368 6/19 (32%)
C2H2 Zn finger 508..528 CDD:275368 6/20 (30%)
C2H2 Zn finger 537..557 CDD:275368 5/19 (26%)
C2H2 Zn finger 565..582 CDD:275368 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449746
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I1382
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.980

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