DRSC/TRiP Functional Genomics Resources

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Protein Alignment D19A and Neu2

DIOPT Version :9

Sequence 1:NP_477304.1 Gene:D19A / 38718 FlyBaseID:FBgn0022935 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster


Alignment Length:506 Identity:111/506 - (21%)
Similarity:169/506 - (33%) Gaps:163/506 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 PGLSKKLCF--CTSLSVEQNDGFPKNLCTLCYTKLNELHDFQKQCVDSVQKFQDLVASNVFACQS 94
            ||||.....  ||...||::|.....:|              |.|::.              .|:
  Fly    11 PGLSIAYIIYKCTGWQVEKHDPLSNTIC--------------KSCLED--------------AQN 47

  Fly    95 SFDVFDPNVAVQDYPAEEEDHVNYDPLLNHKMELIENEEDVFKMLEHVDKEAEEVEKEAKVEEDD 159
            :||:                           :|..|.....::.|:.|.:|.         .|:|
  Fly    48 AFDI---------------------------IETYERSHQFYRFLKDVREEE---------SEND 76

  Fly   160 GGNVSVKMFDDDSSIESGNDNDHDLDFEPNSSDDDIPLAQRMRGPATGSGPQQDRFSNLDKPKPR 224
            |...|.::...:..::.|.| |.|...||:.::.||                        |.|.:
  Fly    77 GSGCSEEVEAAERDLQDGAD-DVDSGNEPDINECDI------------------------KAKEK 116

  Fly   225 PRGRPKKIKPPPPEEEELSDSSSESDDSEDGTSRGDKPK----RKRIPIEER-HL-HRIIDCHIC 283
            |                             |.|....||    :..:.:..| |. .|...|.:|
  Fly   117 P-----------------------------GFSCSHCPKSFQVKSNLKVHMRSHTGERPFTCSLC 152

  Fly   284 HQKFKKAIRYEEHMKYHNDLLPFQCKVETCKKGFTTANGLRIHIDHAHTELSEVHACIAEGCGKT 348
            .:.|..:...:.||:.|....||||  ..|.:.||..:.|:.|| ..|.....:.....:.|   
  Fly   153 PKSFGYSSGLQNHMRTHTGERPFQC--SHCPRSFTAGHHLKAHI-QMHERRGSLRCPYCQKC--- 211

  Fly   349 FPRVRLLTFHMKKVHGITKAAAPLRDFPCTECDTVFRCPTALKKHMYKHTGEELPYPCNICGKRF 413
                 .||..:.|.|..|....  ..|.|::|...|:....|..||..|  :|..:.|..|.|.|
  Fly   212 -----FLTSLILKQHLATHTDE--TQFKCSQCSKSFQVEHELWMHMRVH--QERLFTCGHCSKDF 267

  Fly   414 VINSALRDHLMRHAGI---------------KNHVCPYCGVGKTTRQEWNAHILTHTKEKKFKCR 463
            .:::.|:.||.|:|..               |...|..|....|.|...:.|:.:|||.|.....
  Fly   268 ALHAYLKRHLSRNARCSQSSKASAHKTLGHSKALKCGKCPKTFTDRSALSTHLKSHTKNKPLLEG 332

  Fly   464 QCDHASHNKQALSNHVKVVHEKRKDFACQYCGKTFGKSHACKVHERSHTGE 514
            .| .:|.:|.|.||      .:||.|.|..|.:||.:..|...|.::|||:
  Fly   333 PC-KSSGSKPAHSN------AQRKPFKCSSCPRTFSRKSALLTHLQTHTGK 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D19ANP_477304.1 zf-AD 12..83 CDD:214871 12/52 (23%)
C2H2 Zn finger 343..362 CDD:275368 3/18 (17%)
C2H2 Zn finger 377..397 CDD:275368 6/19 (32%)
zf-H2C2_2 389..414 CDD:290200 8/24 (33%)
C2H2 Zn finger 406..426 CDD:275368 7/19 (37%)
C2H2 Zn finger 434..454 CDD:275368 5/19 (26%)
C2H2 Zn finger 462..483 CDD:275368 6/20 (30%)
C2H2 Zn finger 491..511 CDD:275368 6/19 (32%)
C2H2 Zn finger 519..539 CDD:275368
C2H2 Zn finger 652..673 CDD:275368
C2H2 Zn finger 681..701 CDD:275368
zf-H2C2_2 694..718 CDD:290200
C2H2 Zn finger 709..729 CDD:275368
tolA_full 724..>814 CDD:274303
Neu2NP_649316.1 zf-AD 1..63 CDD:285071 17/106 (16%)
COG5048 <119..241 CDD:227381 32/134 (24%)
C2H2 Zn finger 121..141 CDD:275368 3/19 (16%)
zf-H2C2_2 133..158 CDD:290200 6/24 (25%)
C2H2 Zn finger 149..169 CDD:275368 5/19 (26%)
zf-H2C2_2 162..185 CDD:290200 8/24 (33%)
C2H2 Zn finger 177..197 CDD:275368 7/22 (32%)
C2H2 Zn finger 205..225 CDD:275368 5/27 (19%)
zf-C2H2_8 206..286 CDD:292531 24/91 (26%)
C2H2 Zn finger 233..253 CDD:275368 6/19 (32%)
C2H2 Zn finger 260..297 CDD:275368 9/36 (25%)
C2H2 Zn finger 303..323 CDD:275368 5/19 (26%)
C2H2 Zn finger 353..373 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446565
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I1382
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.980

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