DRSC/TRiP Functional Genomics Resources

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Protein Alignment D19A and prg

DIOPT Version :9

Sequence 1:NP_477304.1 Gene:D19A / 38718 FlyBaseID:FBgn0022935 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_001260253.1 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster


Alignment Length:783 Identity:151/783 - (19%)
Similarity:243/783 - (31%) Gaps:277/783 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SLCRICLNHLQNDAAYDLYLVPGLSKKLCFCTSLSV------------EQNDGFPKNLCTLCYTK 63
            |.||:| :|..:..:.:::     ...:.||..:|:            ::|:...:.:|:.|...
  Fly    15 STCRLC-HHNTDPNSLNIF-----DDTVQFCKDVSIAEVSKSLWSVQYDRNECLSELICSRCLEI 73

  Fly    64 LNELHDFQKQCVDSVQKFQDLVASNVFACQSSFDVFDPNVAVQDYPAEEEDHVNYDPLLNHKMEL 128
            |.|..:.:|...:..|..|:.:...:                       :||..:.|.||....:
  Fly    74 LEEAFELRKGMQEREQSLQEQLKEMI-----------------------KDHPKHRPGLNGNPGV 115

  Fly   129 IENEEDVFKMLEHVDKE--AEEVEKEAKVEEDDGGNVSVKMFDDDSSIESGNDNDHDLDFEPNSS 191
            ...||..  ::..||.|  ||..|:|..:                     |:|.:::     |..
  Fly   116 FVPEEGC--IIVEVDPENLAESSEEEFAL---------------------GSDGEYE-----NYD 152

  Fly   192 DDDIPLAQRMRGPATGSGPQQDRFSNLDKPKPRPRGRPKKIKPPPPEEEELSDSSSESDDSEDGT 256
            |||                                           ||||   ...:.:|.|||.
  Fly   153 DDD-------------------------------------------EEEE---EDYDEEDEEDGQ 171

  Fly   257 SRGDKPKRKRIPIEERHLHRIIDCHICHQKFKKAIRYEEHMKYHNDLLPFQCKVETCKKGFTTAN 321
            :..|                 :|                                          
  Fly   172 NGED-----------------VD------------------------------------------ 177

  Fly   322 GLRIHIDHAHTELSEVHACIAEGCGKTFPRVRLLTFHMKKVHGITKAAAPLRDFPCTECDTVFRC 386
             :.:.:|.|.....:..|..|.                      |..|.|.|.|.|..||..|..
  Fly   178 -MPLGMDAAQMAAQQSVANNAN----------------------TTEARPKRAFLCQYCDLGFTL 219

  Fly   387 PTALKKHMYKHTGEELPYPCNICGKRFVINSALRDHLMR-HAGIKNHVCPYCGVGKTTRQEWNAH 450
            |...::|.........||.||.|..:.|...||..|:.. |...:.:||.:|..|...|.:...|
  Fly   220 PAECQEHELAAHDPNAPYCCNFCNIKLVTRPALISHIKTLHDPDRPYVCAHCRKGFVRRSDLKKH 284

  Fly   451 ILTHTKEKKFKCRQCDHASHNKQALSNHVKVVHEKRKDFACQYCGKTFGKSHACKVHERSHTGEK 515
            .:.||..:.|.|..|..:......|:.|:: :|...|.|.||.|.::|..:.....|.|||...|
  Fly   285 TIVHTGVRPFTCNVCSKSFSRNTNLTKHMR-IHSGVKPFVCQQCPRSFQTAVEMMRHTRSHGEVK 348

  Fly   516 CCECKICGKIFLCEKSLTKHLKTHEKRDLPPAEPLRQQLNIPMPGQMSVPMPGQMPMQMQTDGLV 580
            ..:|..|...|.....|..|.:.|.:||:.                           |.|..||:
  Fly   349 AFQCGRCPYSFSRRDKLIAHQQVHTRRDME---------------------------QQQQMGLI 386

  Fly   581 PMDPNQMPSEDMLKACGGGTAAVPPKPKNSRRVQRVDISQLAGTAVNPIPSVSVPSWSPQVNFTK 645
            |      |.|..|:.                  |.:...|.|...                  ||
  Fly   387 P------PMEGDLQQ------------------QALQAKQKAAAQ------------------TK 409

  Fly   646 KEGQHICPGCGRGFNNIGNMKLHYKIIHEKVKDFACRFCPKRFSKAQILRHHEWIHTGEKPFECK 710
            ....:.|..|.|.|....:::.|..:..:.:  |||:.|.:.|::.:.|:.|| :......|.|.
  Fly   410 NSRYYHCDVCDRTFQRERDLQRHQALHMDSL--FACKTCNQGFNRREQLQRHE-LEAHGPSFTCG 471

  Fly   711 ICGKHFRQETALKKHIKTHEKPNRRHVPERSAPTQITFRKLEPDAE-PRNFDQYQDPAVERAAAT 774
            ||...|..:..|:.|:|.|:..::  :.:|:....|...|:...|. .......|||.:.|.:| 
  Fly   472 ICCISFLHQIELENHLKVHQLQHK--MAQRAQEAAILPLKMAEKAPVAMTAPLVQDPQLVRPSA- 533

  Fly   775 AEL 777
            |||
  Fly   534 AEL 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D19ANP_477304.1 zf-AD 12..83 CDD:214871 14/82 (17%)
C2H2 Zn finger 343..362 CDD:275368 0/18 (0%)
C2H2 Zn finger 377..397 CDD:275368 6/19 (32%)
zf-H2C2_2 389..414 CDD:290200 6/24 (25%)
C2H2 Zn finger 406..426 CDD:275368 7/20 (35%)
C2H2 Zn finger 434..454 CDD:275368 5/19 (26%)
C2H2 Zn finger 462..483 CDD:275368 4/20 (20%)
C2H2 Zn finger 491..511 CDD:275368 6/19 (32%)
C2H2 Zn finger 519..539 CDD:275368 5/19 (26%)
C2H2 Zn finger 652..673 CDD:275368 5/20 (25%)
C2H2 Zn finger 681..701 CDD:275368 6/19 (32%)
zf-H2C2_2 694..718 CDD:290200 8/23 (35%)
C2H2 Zn finger 709..729 CDD:275368 7/19 (37%)
tolA_full 724..>814 CDD:274303 15/55 (27%)
prgNP_001260253.1 zf-AD 16..94 CDD:285071 15/83 (18%)
COG5048 <212..340 CDD:227381 35/128 (27%)
C2H2 Zn finger 239..260 CDD:275368 7/20 (35%)
C2H2 Zn finger 268..288 CDD:275368 5/19 (26%)
zf-H2C2_2 280..305 CDD:290200 6/24 (25%)
zf-C2H2 294..316 CDD:278523 5/22 (23%)
C2H2 Zn finger 296..316 CDD:275368 4/20 (20%)
zf-H2C2_2 308..331 CDD:290200 8/23 (35%)
C2H2 Zn finger 324..344 CDD:275368 6/19 (32%)
C2H2 Zn finger 352..372 CDD:275368 5/19 (26%)
C2H2 Zn finger 416..436 CDD:275368 5/19 (26%)
C2H2 Zn finger 443..464 CDD:275368 6/21 (29%)
C2H2 Zn finger 470..490 CDD:275368 7/19 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24388
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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