DRSC/TRiP Functional Genomics Resources

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Protein Alignment D19A and CG2120

DIOPT Version :9

Sequence 1:NP_477304.1 Gene:D19A / 38718 FlyBaseID:FBgn0022935 Length:845 Species:Drosophila melanogaster
Sequence 2:NP_572446.2 Gene:CG2120 / 31737 FlyBaseID:FBgn0030005 Length:315 Species:Drosophila melanogaster


Alignment Length:354 Identity:86/354 - (24%)
Similarity:122/354 - (34%) Gaps:130/354 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   385 RCPTALKKHMYKHTGEELPYPCNICGKRFVINSALRDHLMRHAGIKNHVCPYCGVGKTTRQEWNA 449
            |.||. |:|  :.||::  :.|:||.:||.....||.|.|.|...|.|||..||.|.....:...
  Fly    85 RTPTT-KRH--RTTGKD--HTCDICDRRFSEAYNLRIHKMTHTDEKPHVCVECGKGFRQLNKLRI 144

  Fly   450 HILTHTKEKKFKCRQCDHASHNKQALSNHVKVVHEKRKDFACQYCGKTFGKSHACKVHERSHTGE 514
            |.:|||.|:..|                             |..|||.|..::...||.|.||||
  Fly   145 HAVTHTAERPHK-----------------------------CDICGKGFRYANYLTVHRRLHTGE 180

  Fly   515 K-----CCECKICGKIFLCEKSLTKHLKTHEKRDLPPAEPLRQQLNIPMPGQMSVPMPGQMPMQM 574
            |     ..:|.:........:..|| |:...:.|..|..||.:|                     
  Fly   181 KPYPCLATDCHLSFHSIHARRIHTK-LRHAAQTDPDPEHPLAEQ--------------------- 223

  Fly   575 QTDGLVPMDPNQMPSEDMLKACGGGTAAVPPKPKNSRRVQRVDISQLAGTAVNPIPSVSVPSWSP 639
                                                   ::.|.|.|:.|               
  Fly   224 ---------------------------------------EQRDTSALSFT--------------- 234

  Fly   640 QVNFTKKEGQHICPGCGRGFNNIGNMKLHYKIIHEKVKDFAC--RFCPKRFSKAQILRHHEWIHT 702
                        ||.|.|...:...:.:|.| .|...:||.|  ..|.|||..|..|:||:..||
  Fly   235 ------------CPVCSRVLTDQCYLSIHLK-RHYNQRDFPCPQPECGKRFFSASELKHHQIAHT 286

  Fly   703 GEKPFECKICGKHFRQETALKKHIKTHEK 731
            .::||.|.:|...|.:::..|:|:|.||:
  Fly   287 QQRPFACPLCPARFLRKSNHKQHLKVHER 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D19ANP_477304.1 zf-AD 12..83 CDD:214871
C2H2 Zn finger 343..362 CDD:275368
C2H2 Zn finger 377..397 CDD:275368 5/11 (45%)
zf-H2C2_2 389..414 CDD:290200 8/24 (33%)
C2H2 Zn finger 406..426 CDD:275368 9/19 (47%)
C2H2 Zn finger 434..454 CDD:275368 5/19 (26%)
C2H2 Zn finger 462..483 CDD:275368 0/20 (0%)
C2H2 Zn finger 491..511 CDD:275368 8/19 (42%)
C2H2 Zn finger 519..539 CDD:275368 4/19 (21%)
C2H2 Zn finger 652..673 CDD:275368 6/20 (30%)
C2H2 Zn finger 681..701 CDD:275368 9/21 (43%)
zf-H2C2_2 694..718 CDD:290200 10/23 (43%)
C2H2 Zn finger 709..729 CDD:275368 6/19 (32%)
tolA_full 724..>814 CDD:274303 4/8 (50%)
CG2120NP_572446.2 C2H2 Zn finger 101..121 CDD:275368 9/19 (47%)
zf-H2C2_2 113..138 CDD:290200 12/24 (50%)
C2H2 Zn finger 129..149 CDD:275368 5/19 (26%)
zf-H2C2_2 142..166 CDD:290200 11/52 (21%)
COG5048 151..>264 CDD:227381 37/230 (16%)
C2H2 Zn finger 157..177 CDD:275368 8/19 (42%)
C2H2 Zn finger 185..206 CDD:275368 3/21 (14%)
C2H2 Zn finger 235..255 CDD:275368 6/20 (30%)
C2H2 Zn finger 263..285 CDD:275368 9/21 (43%)
C2H2 Zn finger 293..313 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446550
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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