DRSC/TRiP Functional Genomics Resources

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Protein Alignment D19B and Sry-beta

DIOPT Version :10

Sequence 1:NP_477297.1 Gene:D19B / 38717 FlyBaseID:FBgn0022699 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_524579.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster


Alignment Length:369 Identity:78/369 - (21%)
Similarity:142/369 - (38%) Gaps:100/369 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 HFDPLLNSKIEIIENE-------------EDVFKMLESVEKEVEEVEMEMEQPFGRVSQDDSFES 168
            :|:.::|.::|::.|.             :.:.:.|..|::::.:..:...|..|:.....    
  Fly    41 YFEKIINQRLELLPNSAACRDCLEYLFNYDRLVRNLSQVQRQIADALLGCRQVEGKAETKQ---- 101

  Fly   169 GNDNDLDADFQISSDDDIPLAQRSRRGATRGSKAKGKPKSAAK---RQEEESEESEETSSSDDSD 230
                                 |.::|...:....|....:|.|   ||..|.:|.||....:..|
  Fly   102 ---------------------QAAKRARVQVPAFKIVQATALKEPERQPGEEDECEEFMKEEMLD 145

  Fly   231 -----GNPKDKPKRKRIPATERD---RHRLIDCHICHQKFKKAIRYEEHMKHHNDLLPFQCTVES 287
                 ..|.|.     :|::|.:   ....|.||||.:.|......|.|:|           .::
  Fly   146 EEFQFSEPDDS-----MPSSEEEFFTETTEIPCHICGEMFSSQEVLERHIK-----------ADT 194

  Fly   288 CRKG-FTTAN--GLRVHVEHAHTETSAMHPCTYEGCNKSFARPVLLSFHMKRVHKVDTPQRDFPC 349
            |:|. ..|.|  ||:|..:.                        :|..|| .:|:..|   :..|
  Fly   195 CQKSEQATCNVCGLKVKDDE------------------------VLDLHM-NLHEGKT---ELEC 231

  Fly   350 TECEKVFRCPTALKKHMYKHTGEELPFACEICGKRFPINSVLRDHLLRHAGIKNH-VCPYCGVGK 413
            ..|:|.|.....:.:||..| .::..:.|:.||:||.::.::.:||:||...:|. :|..|....
  Fly   232 RYCDKKFSHKRNVLRHMEVH-WDKKKYQCDKCGERFSLSWLMYNHLMRHDAEENALICEVCHQQF 295

  Fly   414 TTRQEWNKHILTH-TKEKKYECRQCDHASHNKQALANHVKVVHE 456
            .|::.:..|:.|| |...:|.|..|:.:..:|..|..| |.||:
  Fly   296 KTKRTYKHHLRTHQTDRPRYPCPDCEKSFVDKYTLKVH-KRVHQ 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D19BNP_477297.1 zf-AD 12..83 CDD:214871
C2H2 Zn finger 255..275 CDD:275368 8/19 (42%)
SFP1 <266..365 CDD:227516 19/101 (19%)
C2H2 Zn finger 283..335 CDD:275368 9/54 (17%)
C2H2 Zn finger 318..338 CDD:275368 3/19 (16%)
COG5048 <347..512 CDD:227381 33/112 (29%)
C2H2 Zn finger 349..369 CDD:275368 6/19 (32%)
C2H2 Zn finger 378..398 CDD:275368 7/19 (37%)
C2H2 Zn finger 406..426 CDD:275368 4/19 (21%)
C2H2 Zn finger 434..455 CDD:275368 6/20 (30%)
C2H2 Zn finger 463..483 CDD:275368
C2H2 Zn finger 491..511 CDD:275368
C2H2 Zn finger 586..607 CDD:275368
C2H2 Zn finger 615..635 CDD:275368
zf-H2C2_2 627..652 CDD:463886
C2H2 Zn finger 643..663 CDD:275368
Sry-betaNP_524579.1 C2H2 Zn finger 203..223 CDD:275368 7/44 (16%)
C2H2 Zn finger 231..251 CDD:275368 6/19 (32%)
C2H2 Zn finger 259..308 CDD:275368 14/48 (29%)
C2H2 Zn finger 288..303 CDD:275370 3/14 (21%)
zf-C2H2 315..337 CDD:395048 7/22 (32%)
C2H2 Zn finger 317..337 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.

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