DRSC/TRiP Functional Genomics Resources

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Protein Alignment D19B and CG17801

DIOPT Version :10

Sequence 1:NP_477297.1 Gene:D19B / 38717 FlyBaseID:FBgn0022699 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_650660.2 Gene:CG17801 / 42144 FlyBaseID:FBgn0038550 Length:381 Species:Drosophila melanogaster


Alignment Length:464 Identity:105/464 - (22%)
Similarity:161/464 - (34%) Gaps:135/464 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 NLCNVCFSKLNDLHDFQKQCVDSVQKFQDLVA--------SNAFACQTNFDVLDTSAAVADLPGE 111
            :||..||..||....|   |::.:.|.:||..        .....|.:..:.|:||..       
  Fly    11 HLCASCFCHLNPTIIF---CLEVLAKIKDLTGIWLEQNERQPRHICPSCLNDLNTSIK------- 65

  Fly   112 EEDNVHFDPLLNSKIEIIENEEDVFKMLESVEKEVEEVEMEMEQPFGRVSQDDSFESGNDNDLDA 176
                      |..:|:.:.||..:.:                             |||.|.||: 
  Fly    66 ----------LKKRIQRVHNEATLRR-----------------------------ESGLDEDLE- 90

  Fly   177 DFQISSDDDIPLAQRSRRGATRGSKAKGKPKSAAKRQEEESEESE-ETSSSDDSDGNPKDKPKRK 240
                |:..||                           |.|.:.|: |:..|.||:..|.||    
  Fly    91 ----STVSDI---------------------------EPEGDSSDLESEESYDSENYPFDK---- 120

  Fly   241 RIPATERDRHRLIDCHICHQKFKKAIRYEEH----------MKHHNDL----------LPFQCTV 285
              .|.|.|    ||.::.|:.    .|.|.|          .||.|.|          ||.:...
  Fly   121 --KAEESD----IDLNLAHED----RRNEPHNPYDSETPLIFKHKNPLIETPSFANENLPNKVDA 175

  Fly   286 ESCRKGFTTANGLRVHVEHAHTETSAMHPCTYEGCNKSFARPVLLSFHMKRVHKVDTPQRDFPCT 350
            :|.:||.....|..:.:...:.....:.|.       :.|...:.:.::....:.....:...|.
  Fly   176 KSPKKGNFIQIGTDLRLLTTYPSIKVVKPL-------ALAPEDVAAENVPPAKRTARKMQSLVCP 233

  Fly   351 ECEKVFRCPTALKKHMYKHTGEELPFACEICGKRFPINSVLRDH-LLRHAGIKNHVCPYCGVGKT 414
            :|.:||:.|..||.||.:||||: .|.|..|.|||....:.|.| .:||.|.:...|.:|.....
  Fly   234 KCGRVFKTPYNLKTHMVRHTGEK-NFPCTFCDKRFVTKYLARLHERVRHMGEQPFECNFCSATFF 297

  Fly   415 TRQEWNKH-ILTHTKEKKYECRQCDHASHNKQALANHVKVVHEKRKDFACQYCGKTFGKSHACKI 478
            |....:.| .:.|.::.:|:|.||....:.|..|..| |.:|...|.|.|..|...|.:....:.
  Fly   298 TSTAKSSHERIRHIRDLRYQCDQCTKRFNTKTCLNKH-KFLHSGLKPFDCVICQINFARKATLRS 361

  Fly   479 HERSHTGEK 487
            |..|...:|
  Fly   362 HFDSVAHQK 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D19BNP_477297.1 zf-AD 12..83 CDD:214871 9/27 (33%)
C2H2 Zn finger 255..275 CDD:275368 5/29 (17%)
SFP1 <266..365 CDD:227516 22/118 (19%)
C2H2 Zn finger 283..335 CDD:275368 6/51 (12%)
C2H2 Zn finger 318..338 CDD:275368 1/19 (5%)
COG5048 <347..512 CDD:227381 46/143 (32%)
C2H2 Zn finger 349..369 CDD:275368 9/19 (47%)
C2H2 Zn finger 378..398 CDD:275368 7/20 (35%)
C2H2 Zn finger 406..426 CDD:275368 4/20 (20%)
C2H2 Zn finger 434..455 CDD:275368 7/20 (35%)
C2H2 Zn finger 463..483 CDD:275368 4/19 (21%)
C2H2 Zn finger 491..511 CDD:275368
C2H2 Zn finger 586..607 CDD:275368
C2H2 Zn finger 615..635 CDD:275368
zf-H2C2_2 627..652 CDD:463886
C2H2 Zn finger 643..663 CDD:275368
CG17801NP_650660.2 zf-AD 9..76 CDD:462262 17/84 (20%)
zf-C2H2 231..252 CDD:395048 9/20 (45%)
C2H2 Zn finger 232..252 CDD:275368 9/19 (47%)
zf-H2C2_2 244..269 CDD:463886 14/25 (56%)
C2H2 Zn finger 260..281 CDD:275368 7/20 (35%)
C2H2 Zn finger 289..308 CDD:275368 4/18 (22%)
C2H2 Zn finger 318..338 CDD:275368 7/20 (35%)
C2H2 Zn finger 346..362 CDD:275368 3/15 (20%)
Blue background indicates that the domain is not in the aligned region.

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