DRSC/TRiP Functional Genomics Resources

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Protein Alignment D19B and CG8319

DIOPT Version :9

Sequence 1:NP_477297.1 Gene:D19B / 38717 FlyBaseID:FBgn0022699 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_649920.2 Gene:CG8319 / 41165 FlyBaseID:FBgn0037722 Length:383 Species:Drosophila melanogaster


Alignment Length:514 Identity:112/514 - (21%)
Similarity:173/514 - (33%) Gaps:163/514 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VCRTC-------LSTVDDSA-AYDLFRVPG--LAKKLCVCTSLSVEQADGFPKNLCNVCFSKLND 66
            :||.|       |...||.. .|    |.|  ||:.:..|..:.::..|..|:.:|..|......
  Fly     4 LCRICGGASENMLGIFDDQVEEY----VDGAKLAEMVKTCADVQLDPDDAMPQKMCISCVHDART 64

  Fly    67 LHDFQKQCVDSVQKFQDLVASNAFACQTNFDVLDTSAAVADLPGEEEDNVHFDPLLNSKIEIIEN 131
            .:.|:::|.::.:||                                    :..:||.::...|.
  Fly    65 AYGFKRRCEENYKKF------------------------------------YLAILNGQVIKDEP 93

  Fly   132 EEDVFKMLESVEKEVEEVEMEMEQPFGRVSQDDSFESGNDNDLDADFQISSDDDIPLAQRSRRGA 196
            .|:.|..:|:.:|...|.:.::.:...:..|                         .|.|:.:.:
  Fly    94 NEEDFLFIENPDKGNLEAKKKLNKEIKKTHQ-------------------------TASRTTKSS 133

  Fly   197 TRGSKAKGKPKSAAKRQEEESEESEETSSSDDSDGNPKDKPKRKRIPATERDRHRLIDCHICHQK 261
            ...|:| |:...:.|.|                                      ...|.:|.::
  Fly   134 ITTSRA-GRQLRSIKNQ--------------------------------------TFKCELCIKQ 159

  Fly   262 FKKAIRYEEHMKHHNDLLPFQCTVESCRKGFTTANGLRVHVEHAHTETSAMHPCTYEGCNKSFAR 326
            ||:.|...:|||.|                                  |..|.|  :.|.:.|..
  Fly   160 FKRQINLLDHMKVH----------------------------------SNSHVC--QNCEERFLF 188

  Fly   327 PVLLSFHMKRVHKVDTPQRDFPCTECEKVFRCPTALKKHMYKHTGEELPFACEICGKRFPINSVL 391
            ...|..|....:...|.:    |.||.|||....:|..|..|...|..||.|..|.:.|.....|
  Fly   189 KADLDNHQCYRNSNSTVE----CPECLKVFSSTQSLDSHKCKDMQERSPFQCPHCQQAFTREQNL 249

  Fly   392 RDHLLRHAGIKN----HVCPYCGVGKTTRQEWNKHILTHTKEKKYECRQCDHASHNKQALANHVK 452
            :.|||.||..|.    |.|.||..|...:.....||..|..|:.:.|..|.....:||||..|::
  Fly   250 KAHLLIHAESKQGNGPHKCSYCQTGFFNKSALKVHIHAHMGERPHACPFCVSNFRSKQALKVHIR 314

  Fly   453 VVHEKRKDFACQYCGKTFGKSHACKIHERSHTGEKCCECKICGKVFLFEKGLTKHLKTH 511
             :|...|.:.|.:|.|||..::....|.|.|:.|:..:|.||.:.|. ||   .|||.|
  Fly   315 -IHTGEKPYQCPHCPKTFSDNNNLAKHRRRHSDERPYKCSICLQDFR-EK---HHLKRH 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D19BNP_477297.1 zf-AD 12..83 CDD:214871 20/80 (25%)
C2H2 Zn finger 255..275 CDD:275368 8/19 (42%)
C2H2 Zn finger 283..335 CDD:275368 7/51 (14%)
C2H2 Zn finger 318..338 CDD:275368 4/19 (21%)
COG5048 <347..512 CDD:227381 59/169 (35%)
C2H2 Zn finger 349..369 CDD:275368 8/19 (42%)
C2H2 Zn finger 378..398 CDD:275368 7/19 (37%)
C2H2 Zn finger 406..426 CDD:275368 6/19 (32%)
C2H2 Zn finger 434..455 CDD:275368 7/20 (35%)
C2H2 Zn finger 463..483 CDD:275368 7/19 (37%)
C2H2 Zn finger 491..511 CDD:275368 9/19 (47%)
C2H2 Zn finger 586..607 CDD:275368
C2H2 Zn finger 615..635 CDD:275368
zf-H2C2_2 627..652 CDD:290200
C2H2 Zn finger 643..663 CDD:275368
CG8319NP_649920.2 zf-AD 4..79 CDD:285071 18/78 (23%)
COG5048 <153..368 CDD:227381 75/259 (29%)
C2H2 Zn finger 153..173 CDD:275368 8/19 (42%)
C2H2 Zn finger 179..196 CDD:275368 4/18 (22%)
C2H2 Zn finger 207..227 CDD:275370 8/19 (42%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
C2H2 Zn finger 268..288 CDD:275368 6/19 (32%)
C2H2 Zn finger 296..316 CDD:275368 7/20 (35%)
zf-H2C2_2 308..332 CDD:290200 9/24 (38%)
zf-C2H2 322..344 CDD:278523 7/21 (33%)
C2H2 Zn finger 324..344 CDD:275368 7/19 (37%)
C2H2 Zn finger 352..368 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449791
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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