DRSC/TRiP Functional Genomics Resources

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Protein Alignment D19B and CG11247

DIOPT Version :10

Sequence 1:NP_477297.1 Gene:D19B / 38717 FlyBaseID:FBgn0022699 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster


Alignment Length:598 Identity:134/598 - (22%)
Similarity:223/598 - (37%) Gaps:144/598 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 VSQDDSFESGNDNDLDADFQISSDDDIPLAQRSRRGATRGSKAKGKPKSAAKRQ---EEESEESE 221
            ||::|:.....|:.:    .:||.   |.|:.|..|.|...|.: |...|:.|.   :||.::..
  Fly     8 VSKEDAVSLLTDSGI----SLSSP---PAARESSPGPTLAIKRR-KSSLASLRDACVDEEEDDGG 64

  Fly   222 ETSSSDDSDGNPKDKPKRKRIPATERDRHRLIDCHICHQKFKKAIRYEEHMKHHNDLLPFQCTVE 286
            |..|.||....|:.|...::....:|..|   .|..|.::|......:.||..|:|..|.:|  :
  Fly    65 EQDSKDDDYVQPQLKKSARKGEPVKRKHH---VCSQCSKEFGGKTDLQRHMLIHSDERPHKC--K 124

  Fly   287 SCRKGFTTANGLRVHVEHAHTETSAMHPCTYEGCNKSFARPVLLSFHMKRVHKVDTPQRDFPCTE 351
            .|.|.:..|..|:.|:..||.                         |.|:          |.|::
  Fly   125 DCGKSYRQAVNLKNHITTAHE-------------------------HRKQ----------FVCSQ 154

  Fly   352 CEKVFRCPTALKKHMYKHTGEELPFACEICGKRFPINSVLRDHLLRH--AGIKNHVCPYCGVGKT 414
            |.|.|.....|:.||..|:||: |:.|::|.|:|.....|:.|::.|  ..|:...|..|....:
  Fly   155 CPKSFALKERLRLHMRLHSGEK-PYPCDLCDKKFARGGQLQQHMVSHHKTSIQQFNCTKCSASFS 218

  Fly   415 TRQEWNKHILTHTKEKKYECRQCDHASHNKQALANHVKVVHEKRKDFACQYCGKTFGKSHACKIH 479
            |......|:..|.:..::.|..|::...|:.||..|:...|.|...|.|:.|.|..........|
  Fly   219 TNANLRVHMERHEQGMEHRCSICENQFANELALRAHINQEHHKLTQFECEICHKMIEPDEDLATH 283

  Fly   480 ERSHTGEKCCECKICGKVFLFEKGLTKHLKTHEKRDLPKTQGTNALMGDGASGSSTIAKPSPHLR 544
            .:.||..|...|::|...|..:.....|::.|                   :|            
  Fly   284 MQRHTAVKTHVCEVCNTYFTQKSQYNVHMRMH-------------------TG------------ 317

  Fly   545 GRVERVDIAQLAGTVANPIPSVNLPSWSPQVNFTKKEGQHICPDCGKGFNHVSNMKLHYKVVHQK 609
                                                |..:.|..|.:.|.|.|.:|||.: .|..
  Fly   318 ------------------------------------ERPYQCRICHQTFAHSSVLKLHIR-KHTG 345

  Fly   610 VKDFCCRFCPKR--FAKKQYLRHH-EYIHTGEKPYECKVCGKHFRQEQVLKTHMKVHDKPPRPPG 671
            .|.|.|:.|...  |::..:|::| :.||..:|||.|:.|...|:.:..|::|::...|.|....
  Fly   346 EKPFRCQLCEDEVAFSQLAHLKNHMKKIHKQQKPYMCEGCHDFFKIKVELQSHVEHCAKCPVDGD 410

  Fly   672 KPKEPAGPKAESSTAVKRQQPKNFEQYQDPAAERAAATAELLAYQIEENEAKRKAEAELRKIQEA 736
            |   |:|.::|.:      |..:..::......:..::|:.|          |:...|.|.|...
  Fly   411 K---PSGNQSEDA------QILSVLRFNMAVVLKKISSAQKL----------RQLGYEKRLIDNV 456

  Fly   737 AFEQLNKLQKQSN 749
            ....|...|:||:
  Fly   457 IIASLKLAQRQSH 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D19BNP_477297.1 zf-AD 12..83 CDD:214871
C2H2 Zn finger 255..275 CDD:275368 5/19 (26%)
SFP1 <266..365 CDD:227516 21/98 (21%)
C2H2 Zn finger 283..335 CDD:275368 9/51 (18%)
C2H2 Zn finger 318..338 CDD:275368 2/19 (11%)
COG5048 <347..512 CDD:227381 45/166 (27%)
C2H2 Zn finger 349..369 CDD:275368 7/19 (37%)
C2H2 Zn finger 378..398 CDD:275368 6/19 (32%)
C2H2 Zn finger 406..426 CDD:275368 4/19 (21%)
C2H2 Zn finger 434..455 CDD:275368 6/20 (30%)
C2H2 Zn finger 463..483 CDD:275368 4/19 (21%)
C2H2 Zn finger 491..511 CDD:275368 4/19 (21%)
C2H2 Zn finger 586..607 CDD:275368 8/20 (40%)
C2H2 Zn finger 615..635 CDD:275368 5/22 (23%)
zf-H2C2_2 627..652 CDD:463886 10/25 (40%)
C2H2 Zn finger 643..663 CDD:275368 5/19 (26%)
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 47/199 (24%)
C2H2 Zn finger 95..115 CDD:275368 5/19 (26%)
C2H2 Zn finger 123..144 CDD:275368 6/22 (27%)
C2H2 Zn finger 152..172 CDD:275368 7/19 (37%)
C2H2 Zn finger 180..200 CDD:275368 6/19 (32%)
COG5048 <192..369 CDD:227381 47/244 (19%)
C2H2 Zn finger 210..230 CDD:275370 4/19 (21%)
C2H2 Zn finger 238..260 CDD:275371 6/21 (29%)
C2H2 Zn finger 267..287 CDD:275368 4/19 (21%)
C2H2 Zn finger 295..315 CDD:275368 4/19 (21%)
C2H2 Zn finger 323..343 CDD:275368 8/20 (40%)
C2H2 Zn finger 351..374 CDD:275368 5/22 (23%)
C2H2 Zn finger 382..399 CDD:275368 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.

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