DRSC/TRiP Functional Genomics Resources

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Protein Alignment D19B and L

DIOPT Version :10

Sequence 1:NP_477297.1 Gene:D19B / 38717 FlyBaseID:FBgn0022699 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_001188929.1 Gene:L / 36609 FlyBaseID:FBgn0288433 Length:1366 Species:Drosophila melanogaster


Alignment Length:744 Identity:153/744 - (20%)
Similarity:228/744 - (30%) Gaps:259/744 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 QTNFDVLDTSAAVADLPGEEEDNVHFDPLLNSKIEIIE---------------NEEDVFKMLESV 142
            |.::...|..||.|.:..|||.....:.|.:.:.|::.               :|||      :|
  Fly    75 QQSWPTADEPAAPAAVAKEEEAEEGSEELQHPRDEVVASDAAANANGHCKSSGHEED------AV 133

  Fly   143 EKEVEEVEMEMEQPFGRVSQDDSFESGNDNDLDADFQISSDDDIPLAQRSRRGATRGSKAKGKPK 207
            :.| |..::|::.....:|.|:.::......||:.:     .|:.....|...:...|.....|.
  Fly   134 DAE-EPEDLELDDELLSLSGDEDYDDEELQSLDSFY-----SDMYSTHTSSSYSPSISDGTMTPN 192

  Fly   208 S-------AAKRQEEESEESEETSSSDDSDGNPKDKPKRKRIPATERDRHRLIDCHICHQKFKKA 265
            |       .|..||:...|.:....:|.     :|.||.||:|......|.    |..||   :|
  Fly   193 SHHLIGAPTAAGQEDHPTEGKINGGADG-----EDLPKPKRLPHFHHHHHH----HYHHQ---QA 245

  Fly   266 IRYEEHMKHHNDLLPFQCTVESCRKGFTTANGLRVHVEHAHTETSAMHPCTYEGCNKSFARPVLL 330
            ::....::..|         :..:.|.|...|       |....|.....|.||..         
  Fly   246 LKIANKLRKIN---------KEAKMGATAGGG-------ATGAASKFDKLTGEGIK--------- 285

  Fly   331 SFHMKRVHKVDTPQRDFPCTECEKVFRCPTALKKHMYKHTGEELPFACEICGKRFPINSVLRDHL 395
                      ......:.|..|||.|.....||.|:..| .|.|||.||.|.|.|........|.
  Fly   286 ----------SRGDGSYQCQFCEKTFPRLGYLKHHVQSH-AEHLPFKCEYCSKLFKHKRSRDRHK 339

  Fly   396 LRHAGIKNHVCPYCGVGKTTRQEWNKHILTHTKEKKYECRQCDHASHNKQALANHVKVVHEK--- 457
            ..|...:|:.||:|....:.......|:.||..:|.::|..|:...:...||.:|:: .|:|   
  Fly   340 KLHTNERNYKCPHCEAAFSRSDHLKIHMKTHDIQKPFQCSMCNRGYNTAAALTSHMQ-KHKKNAA 403

  Fly   458 -----------------------------------------------RKDF-------------- 461
                                                           |.||              
  Fly   404 ILAAGGNPNALNYSPRSTGSASASVSSNGSLQKRRYALALASDSSPSRMDFPKRSRSNHVGGTTT 468

  Fly   462 --------ACQYCGKT--FG-----KSHACKIHERSHT---------GEKC-CECKICGKVFLFE 501
                    .|.||.|.  |.     .:|...:||:..|         ||.. ..|:.|...|...
  Fly   469 TATPTPLLRCSYCPKVTEFSSLEQLNAHLQSVHEQPQTQAVKTPVQEGEGFQLSCEYCTMKFGNI 533

  Fly   502 KGLTKHLK-THEKR--------------------------DLPKTQGTNALMGDGASGSSTIAKP 539
            .||.:|:: ||..|                          ||||                  .||
  Fly   534 AGLFQHMRSTHMDRLSSPNSYYEHFNRLATAGTFSPRLALDLPK------------------IKP 580

  Fly   540 ---SPHLRGRVERVDI-AQLAGTVANPI------------PS------------VNLPSWSPQVN 576
               ||....|....|: ..|:.....|:            ||            ..||.:....|
  Fly   581 DLGSPERESRPAEDDLPTDLSNNKRRPLTPNPQAQTPLAPPSAPPGVFFCNQCNAGLPDFESFRN 645

  Fly   577 FTKK---EG-QHICPDCGKGFNHVSNMKLHYKVVHQKV--KDF-CCRFCPKRFAKKQYLRHH--- 631
            ..|.   || |.:||.||......|..:.|. |.|..:  .:| |...|.|.|||.:.|:.|   
  Fly   646 HLKSHIAEGMQLVCPHCGMSLPEQSEFERHV-VGHFLITGSEFNCSSSCGKSFAKSEDLQQHLLS 709

  Fly   632 EYIHTGEKPYECKVCGKHFRQEQVLKTHM 660
            |::.|..|   |.:|.:.......::.|:
  Fly   710 EHVLTLLK---CSLCSELCESRMAMQLHL 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D19BNP_477297.1 zf-AD 12..83 CDD:214871
C2H2 Zn finger 255..275 CDD:275368 4/19 (21%)
SFP1 <266..365 CDD:227516 16/98 (16%)
C2H2 Zn finger 283..335 CDD:275368 8/51 (16%)
C2H2 Zn finger 318..338 CDD:275368 2/19 (11%)
COG5048 <347..512 CDD:227381 56/254 (22%)
C2H2 Zn finger 349..369 CDD:275368 8/19 (42%)
C2H2 Zn finger 378..398 CDD:275368 6/19 (32%)
C2H2 Zn finger 406..426 CDD:275368 4/19 (21%)
C2H2 Zn finger 434..455 CDD:275368 5/20 (25%)
C2H2 Zn finger 463..483 CDD:275368 8/26 (31%)
C2H2 Zn finger 491..511 CDD:275368 6/20 (30%)
C2H2 Zn finger 586..607 CDD:275368 7/20 (35%)
C2H2 Zn finger 615..635 CDD:275368 8/22 (36%)
zf-H2C2_2 627..652 CDD:463886 7/27 (26%)
C2H2 Zn finger 643..663 CDD:275368 3/18 (17%)
LNP_001188929.1 C2H2 Zn finger 294..314 CDD:275368 8/19 (42%)
C2H2 Zn finger 322..342 CDD:275368 6/19 (32%)
COG5048 336..769 CDD:227381 84/423 (20%)
C2H2 Zn finger 350..370 CDD:275368 4/19 (21%)
C2H2 Zn finger 378..398 CDD:275368 5/20 (25%)
C2H2 Zn finger 630..650 CDD:275368 4/19 (21%)
C2H2 Zn finger 659..679 CDD:275368 7/20 (35%)
C2H2 Zn finger 689..707 CDD:275368 7/17 (41%)
C2H2 Zn finger 1020..1041 CDD:275368
C2H2 Zn finger 1049..1069 CDD:275368
C2H2 Zn finger 1197..1217 CDD:275368
C2H2 Zn finger 1229..1246 CDD:275368
C2H2 Zn finger 1258..1278 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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