DRSC/TRiP Functional Genomics Resources

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Protein Alignment D19B and CG17328

DIOPT Version :10

Sequence 1:NP_477297.1 Gene:D19B / 38717 FlyBaseID:FBgn0022699 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster


Alignment Length:650 Identity:129/650 - (19%)
Similarity:199/650 - (30%) Gaps:292/650 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 YSIHTVCRTCLS---TVDDSAAYDLFRVPGLAKKLCVCTSLSVEQADGFPKNLCNVCFSKLNDLH 68
            |:||.:||.||.   .|....:.|...:|.:  .|..|..:.|.:.||.|..:||.|..:|....
  Fly     3 YNIHKICRVCLEELHPVTSIYSTDFAMMPSV--MLMQCAKIRVFKTDGLPSVICNNCIYRLGVAF 65

  Fly    69 DFQKQCVDSVQKFQDLVASNAFACQTNFDVLDTSAAVADLPGEEEDNVHFDPLLNSKIEIIEN-E 132
            .|:::|.:|                                         |..|...:.|:|: .
  Fly    66 HFKQECENS-----------------------------------------DLRLRQYLGILESWR 89

  Fly   133 EDVFKMLESVEKEVEEVEMEMEQPFGRVSQDDSFESGNDNDLDADFQISSDDDIPLAQRSRRGAT 197
            :|.....:.|||.:             :.|.||     |.:...|.::|.               
  Fly    90 QDAATNTDFVEKPL-------------LPQRDS-----DEEEPVDAKVSK--------------- 121

  Fly   198 RGSKAKGKPKSAAKRQEEESEESEETSSSDDSDGNPKDKPKRKRIPATERDRHRLIDCHICHQKF 262
            |.|:.:.||....|::                  .||..||   :|.|         |:.||:.|
  Fly   122 RRSRYQRKPPEEHKKR------------------GPKPVPK---MPHT---------CYECHKSF 156

  Fly   263 KKAIRYEEHMKHHNDLLPFQCTVESCRKGFTTANGLRVHVEHAHTETSAMHPCTYEGCNKSFARP 327
            |...:..:|::.|....|:||:.                                  |.:.||:.
  Fly   157 KCIAQLTQHIRTHTGEKPYQCSF----------------------------------CIQRFAQK 187

  Fly   328 VLLSFHMKRVHKVDTPQRDFPCTECEKVFRCPTALKKHMYKHTGEELPFACEICGKRFPINSVLR 392
            .                                .||.|...|||:: ||.||||.|:|......:
  Fly   188 Y--------------------------------NLKVHERTHTGDK-PFQCEICSKQFSALGNFQ 219

  Fly   393 DHLLRHAGIKNHVCPYCGVGKTTRQEWNKHILTHTKEKKYECRQCDHASHNKQALANHVKVVHEK 457
            .|...|.|:::.||..|..|..|..:.:||::|||                  .:.||    |  
  Fly   220 AHQKIHLGVRDQVCSLCQKGFYTAGDLSKHMITHT------------------GIKNH----H-- 260

  Fly   458 RKDFACQYCGKTFG-----KSHACKIH--ERS-------------------------HTGEKCCE 490
                 |..|||.|.     ::|..|:|  |.|                         |...||.:
  Fly   261 -----CDVCGKAFSRRRDMRTHKLKLHPLESSTNHDIVDDDDDEAIDTDPVGLDTLDHAHFKCPD 320

  Fly   491 CKICGKVFLFEKGLTKHLKTHEKRDLPKTQGTNALMGDGASGSSTIAKPSP-------------- 541
               |.|.|.....|:.|.:||                  |:.::.:..|.|              
  Fly   321 ---CDKAFDTADSLSLHFRTH------------------AANNNLLNLPLPPAPPMSHHYHHDAL 364

  Fly   542 -HL--RGRVERVDIAQLAGTVANPIPSVNLPSWSPQVNFTKKEGQHICPDCGKGFNHVSNMKLHY 603
             ||  .....::.:|.:|..:|.|.|....||          ||::..      .:|.:..:|||
  Fly   365 HHLGPPNPATQMGMAAMAHMLAPPPPPPPTPS----------EGRYTM------LHHTAAQRLHY 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D19BNP_477297.1 zf-AD 12..83 CDD:214871 20/73 (27%)
C2H2 Zn finger 255..275 CDD:275368 6/19 (32%)
SFP1 <266..365 CDD:227516 10/98 (10%)
C2H2 Zn finger 283..335 CDD:275368 4/51 (8%)
C2H2 Zn finger 318..338 CDD:275368 3/19 (16%)
COG5048 <347..512 CDD:227381 49/196 (25%)
C2H2 Zn finger 349..369 CDD:275368 3/19 (16%)
C2H2 Zn finger 378..398 CDD:275368 7/19 (37%)
C2H2 Zn finger 406..426 CDD:275368 6/19 (32%)
C2H2 Zn finger 434..455 CDD:275368 2/20 (10%)
C2H2 Zn finger 463..483 CDD:275368 10/51 (20%)
C2H2 Zn finger 491..511 CDD:275368 5/19 (26%)
C2H2 Zn finger 586..607 CDD:275368 3/17 (18%)
C2H2 Zn finger 615..635 CDD:275368
zf-H2C2_2 627..652 CDD:463886
C2H2 Zn finger 643..663 CDD:275368
CG17328NP_609786.2 zf-AD 8..80 CDD:214871 22/114 (19%)
COG5048 146..>211 CDD:227381 27/140 (19%)
C2H2 Zn finger 149..169 CDD:275368 6/19 (32%)
C2H2 Zn finger 177..197 CDD:275368 7/85 (8%)
zf-H2C2_2 189..213 CDD:463886 13/24 (54%)
C2H2 Zn finger 205..225 CDD:275368 7/19 (37%)
C2H2 Zn finger 233..253 CDD:275368 6/19 (32%)
zf-H2C2_2 245..270 CDD:463886 13/53 (25%)
C2H2 Zn finger 261..282 CDD:275368 7/20 (35%)
C2H2 Zn finger 318..338 CDD:275368 6/22 (27%)
Blue background indicates that the domain is not in the aligned region.

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