DRSC/TRiP Functional Genomics Resources

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Protein Alignment D19B and Cf2

DIOPT Version :10

Sequence 1:NP_477297.1 Gene:D19B / 38717 FlyBaseID:FBgn0022699 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster


Alignment Length:600 Identity:128/600 - (21%)
Similarity:199/600 - (33%) Gaps:163/600 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 KSAAKRQEEESEESEE---------TSSSDDSDGNP-------------KDKPKRKRIPATERDR 249
            ||....||:.....|:         .||:..|...|             .|..|...:|....|.
  Fly     3 KSTTNPQEQRLPRPEDQSPAPPPPPPSSATTSTAAPATPTHQVATVIANMDTLKTAFLPNLSMDP 67

  Fly   250 HRLID---CHICHQKFKKAIRYEEHMK-HHNDLLPFQCTVESCRKGFTTANGLRVHVEHAHTETS 310
            :..:.   |.:|||:|::.....:||: .|...|..|..:.:...|...|        ..|.:.|
  Fly    68 NVHVSPHYCPMCHQQFERPQHVADHMQLCHGITLNAQGAIATLDGGHPQA--------QQHPKLS 124

  Fly   311 AMHPCTYEGCNKSFARPVLLSFHMKRVHKVDTP--------------------QRDFPCTECEKV 355
              |||.  .|::.|...|.|..|.:..|:  ||                    ..::.||:|..:
  Fly   125 --HPCF--NCDEKFGNAVDLDEHHRLAHQ--TPAFLSRCLMCSIYGIHSATQQPNEYKCTQCGSI 183

  Fly   356 FRCPTAL----------KKHMYKHTGEELPFACEICGKRFPINSVLRDHL-LRHAGIKNHVCPYC 409
              |.||:          ::.......::||.......:..|.....:..| ..|...:.|     
  Fly   184 --CTTAMLAAGQQGFMEQQEAAVTPDDQLPAMAPRDMRLTPEEQHHQQQLQAEHHHQQQH----- 241

  Fly   410 GVGKTTRQEWNKHILTHTKEKKYECRQCDHASHNKQALANHVKVVHEKRKDFACQYCGKTFGKSH 474
             ..:..:|:..:.:|...:.:..|..|.....|            |::.:|.|        |...
  Fly   242 -QQQQQQQQQQQELLEQQQREMQEQAQQQQVHH------------HQQDQDLA--------GDQV 285

  Fly   475 ACKIH------ERSHTGEKCCECKICGKVFLFEKGLTKH--LKTHEKRDLPKTQGTNALMGDGAS 531
            |.|:.      .::..|         |.:....:.:.|.  |...:..|:..:....|:..:.  
  Fly   286 ALKVPPLTVKLNKNANG---------GAIVSHPQVIIKEEPLSLSDSGDVVNSVPVYAIQANP-- 339

  Fly   532 GSSTIAKPSPHLRGRVERVDI--AQLAGTVANPIPSVNLPSWSP------------QVNFTKKEG 582
                 ..|:|...|.:.....  |.||..:.:..|.......:|            :.:.|.||.
  Fly   340 -----GVPAPASSGVLVGTQTVPADLAHKIRHKCPDCPKTFKTPGTLAMHRKIHTGEADATPKER 399

  Fly   583 QHICPDCGKGFNHVSNMKLHYKVVHQKVKDFCCRFCPKRFAKKQYLRHHEYIHTGEKPYECKVCG 647
            .:.|..|||.|...:.:|.|.: :|...|.|.|.:|.|.|:.|.||..|...|||||||.|..|.
  Fly   400 PYTCSYCGKSFTQSNTLKQHTR-IHTGEKPFHCGYCEKSFSVKDYLTKHIRTHTGEKPYTCPYCD 463

  Fly   648 KHFRQEQVLKTH-MKVH---DKP-------------PRPPGKPKEPAGPKAESSTAVKRQQPKNF 695
            |.|.|...|..| .|:|   .:|             |.||..|..|:||.|        ..|.:.
  Fly   464 KRFTQRSALTVHTTKLHPLXGRPGGGRQLPVPAPAAPPPPTHPPNPSGPGA--------PPPLSA 520

  Fly   696 EQYQDPAAERAAATA 710
            :...||....|||.|
  Fly   521 DTDTDPKKPSAAAAA 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D19BNP_477297.1 zf-AD 12..83 CDD:214871
C2H2 Zn finger 255..275 CDD:275368 7/20 (35%)
SFP1 <266..365 CDD:227516 26/129 (20%)
C2H2 Zn finger 283..335 CDD:275368 12/51 (24%)
C2H2 Zn finger 318..338 CDD:275368 5/19 (26%)
COG5048 <347..512 CDD:227381 27/183 (15%)
C2H2 Zn finger 349..369 CDD:275368 6/29 (21%)
C2H2 Zn finger 378..398 CDD:275368 2/20 (10%)
C2H2 Zn finger 406..426 CDD:275368 2/19 (11%)
C2H2 Zn finger 434..455 CDD:275368 2/20 (10%)
C2H2 Zn finger 463..483 CDD:275368 3/25 (12%)
C2H2 Zn finger 491..511 CDD:275368 3/21 (14%)
C2H2 Zn finger 586..607 CDD:275368 7/20 (35%)
C2H2 Zn finger 615..635 CDD:275368 8/19 (42%)
zf-H2C2_2 627..652 CDD:463886 14/24 (58%)
C2H2 Zn finger 643..663 CDD:275368 8/20 (40%)
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 35/107 (33%)
C2H2 Zn finger 368..388 CDD:275368 2/19 (11%)
C2H2 Zn finger 403..423 CDD:275368 7/20 (35%)
C2H2 Zn finger 431..451 CDD:275368 8/19 (42%)
zf-H2C2_2 443..468 CDD:463886 14/24 (58%)
C2H2 Zn finger 459..480 CDD:275368 8/20 (40%)
Blue background indicates that the domain is not in the aligned region.

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