DRSC/TRiP Functional Genomics Resources

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Protein Alignment D19B and Cf2

DIOPT Version :9

Sequence 1:NP_477297.1 Gene:D19B / 38717 FlyBaseID:FBgn0022699 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_001350854.1 Gene:Cf2 / 33692 FlyBaseID:FBgn0000286 Length:537 Species:Drosophila melanogaster


Alignment Length:600 Identity:128/600 - (21%)
Similarity:199/600 - (33%) Gaps:163/600 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 KSAAKRQEEESEESEE---------TSSSDDSDGNP-------------KDKPKRKRIPATERDR 249
            ||....||:.....|:         .||:..|...|             .|..|...:|....|.
  Fly     3 KSTTNPQEQRLPRPEDQSPAPPPPPPSSATTSTAAPATPTHQVATVIANMDTLKTAFLPNLSMDP 67

  Fly   250 HRLID---CHICHQKFKKAIRYEEHMK-HHNDLLPFQCTVESCRKGFTTANGLRVHVEHAHTETS 310
            :..:.   |.:|||:|::.....:||: .|...|..|..:.:...|...|        ..|.:.|
  Fly    68 NVHVSPHYCPMCHQQFERPQHVADHMQLCHGITLNAQGAIATLDGGHPQA--------QQHPKLS 124

  Fly   311 AMHPCTYEGCNKSFARPVLLSFHMKRVHKVDTP--------------------QRDFPCTECEKV 355
              |||.  .|::.|...|.|..|.:..|:  ||                    ..::.||:|..:
  Fly   125 --HPCF--NCDEKFGNAVDLDEHHRLAHQ--TPAFLSRCLMCSIYGIHSATQQPNEYKCTQCGSI 183

  Fly   356 FRCPTAL----------KKHMYKHTGEELPFACEICGKRFPINSVLRDHL-LRHAGIKNHVCPYC 409
              |.||:          ::.......::||.......:..|.....:..| ..|...:.|     
  Fly   184 --CTTAMLAAGQQGFMEQQEAAVTPDDQLPAMAPRDMRLTPEEQHHQQQLQAEHHHQQQH----- 241

  Fly   410 GVGKTTRQEWNKHILTHTKEKKYECRQCDHASHNKQALANHVKVVHEKRKDFACQYCGKTFGKSH 474
             ..:..:|:..:.:|...:.:..|..|.....|            |::.:|.|        |...
  Fly   242 -QQQQQQQQQQQELLEQQQREMQEQAQQQQVHH------------HQQDQDLA--------GDQV 285

  Fly   475 ACKIH------ERSHTGEKCCECKICGKVFLFEKGLTKH--LKTHEKRDLPKTQGTNALMGDGAS 531
            |.|:.      .::..|         |.:....:.:.|.  |...:..|:..:....|:..:.  
  Fly   286 ALKVPPLTVKLNKNANG---------GAIVSHPQVIIKEEPLSLSDSGDVVNSVPVYAIQANP-- 339

  Fly   532 GSSTIAKPSPHLRGRVERVDI--AQLAGTVANPIPSVNLPSWSP------------QVNFTKKEG 582
                 ..|:|...|.:.....  |.||..:.:..|.......:|            :.:.|.||.
  Fly   340 -----GVPAPASSGVLVGTQTVPADLAHKIRHKCPDCPKTFKTPGTLAMHRKIHTGEADATPKER 399

  Fly   583 QHICPDCGKGFNHVSNMKLHYKVVHQKVKDFCCRFCPKRFAKKQYLRHHEYIHTGEKPYECKVCG 647
            .:.|..|||.|...:.:|.|.: :|...|.|.|.:|.|.|:.|.||..|...|||||||.|..|.
  Fly   400 PYTCSYCGKSFTQSNTLKQHTR-IHTGEKPFHCGYCEKSFSVKDYLTKHIRTHTGEKPYTCPYCD 463

  Fly   648 KHFRQEQVLKTH-MKVH---DKP-------------PRPPGKPKEPAGPKAESSTAVKRQQPKNF 695
            |.|.|...|..| .|:|   .:|             |.||..|..|:||.|        ..|.:.
  Fly   464 KRFTQRSALTVHTTKLHPLXGRPGGGRQLPVPAPAAPPPPTHPPNPSGPGA--------PPPLSA 520

  Fly   696 EQYQDPAAERAAATA 710
            :...||....|||.|
  Fly   521 DTDTDPKKPSAAAAA 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D19BNP_477297.1 zf-AD 12..83 CDD:214871
C2H2 Zn finger 255..275 CDD:275368 7/20 (35%)
C2H2 Zn finger 283..335 CDD:275368 12/51 (24%)
C2H2 Zn finger 318..338 CDD:275368 5/19 (26%)
COG5048 <347..512 CDD:227381 27/183 (15%)
C2H2 Zn finger 349..369 CDD:275368 6/29 (21%)
C2H2 Zn finger 378..398 CDD:275368 2/20 (10%)
C2H2 Zn finger 406..426 CDD:275368 2/19 (11%)
C2H2 Zn finger 434..455 CDD:275368 2/20 (10%)
C2H2 Zn finger 463..483 CDD:275368 3/25 (12%)
C2H2 Zn finger 491..511 CDD:275368 3/21 (14%)
C2H2 Zn finger 586..607 CDD:275368 7/20 (35%)
C2H2 Zn finger 615..635 CDD:275368 8/19 (42%)
zf-H2C2_2 627..652 CDD:290200 14/24 (58%)
C2H2 Zn finger 643..663 CDD:275368 8/20 (40%)
Cf2NP_001350854.1 COG5048 <366..>473 CDD:227381 35/107 (33%)
C2H2 Zn finger 368..388 CDD:275368 2/19 (11%)
C2H2 Zn finger 403..423 CDD:275368 7/20 (35%)
C2H2 Zn finger 431..451 CDD:275368 8/19 (42%)
zf-H2C2_2 443..468 CDD:316026 14/24 (58%)
C2H2 Zn finger 459..480 CDD:275368 8/20 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24388
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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