DRSC/TRiP Functional Genomics Resources

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Protein Alignment D19B and CG10959

DIOPT Version :10

Sequence 1:NP_477297.1 Gene:D19B / 38717 FlyBaseID:FBgn0022699 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster


Alignment Length:506 Identity:122/506 - (24%)
Similarity:198/506 - (39%) Gaps:114/506 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 LCNVCFSKLNDLHDFQKQCVD-----SVQKFQDLVASNAFAC-QTNFDVLDTSAAVADLPGEEED 114
            |.||.:.:|:.....:.:|.:     ...:|| ||   ...| ..:|...|.:..:.        
  Fly     6 LANVDYVRLHAQQQLRPKCGEIFYEPEANRFQ-LV---CLLCDMKHFGFEDFARHIR-------- 58

  Fly   115 NVHFDPLLNSKIEIIENEEDVFKMLESVEKEVEEVEMEMEQPFGRVSQD----DSFES------- 168
            |||||          :....:.|.:..:.:...|     ||.|..||.:    |||:.       
  Fly    59 NVHFD----------KQGRPLTKTVTGLGRLARE-----EQEFQGVSAEPLAVDSFKKEYLPNED 108

  Fly   169 --GNDNDLDADFQISSDDDIPLAQRSRRGATRGSKAKGKPKSAAKRQEEES-----EESEETSSS 226
              ..:.|.:.:..:..|:..||     |....|.|         :..:||:     :...::||:
  Fly   109 VLSEEEDAEQELGLEQDEGNPL-----RIMVLGGK---------QSVDEETIDTMWQPDHDSSSA 159

  Fly   227 DDSDG----------NPKDKPKRKRIPATERDRHRLIDCHICHQKFKKAIRYEEHMKHHNDLLPF 281
            ..::|          ||:|..     |..:.:.|:.:        |||    :...|.:|     
  Fly   160 SVNEGCALEALLGVENPQDYQ-----PDEDGEEHQSV--------FKK----QRQPKDYN----- 202

  Fly   282 QCTVESCRKGFTTANGLRVHVEHAHTETSAMHPCTYEGCNKSFARPVLLSFHMKRVHKVDTPQRD 346
             |  ..|.:.:||...|..|::.:|....|. .|.  .|..:|.....|:.|.::.|      .:
  Fly   203 -C--PHCDRRYTTQKYLNTHLKMSHPFPQAF-KCV--DCKATFDVDRALAQHRRKEH------TE 255

  Fly   347 FPCTECEKVFRCPTALKKHMYKHTGEELPFAC--EICGKRFPINSVLRDHLLRHAGIKNHVCPYC 409
            |.|..|:|||:...:|.:|:..|:|.. .|.|  |.|||.|.....|..|...|:..:|:||..|
  Fly   256 FACQLCDKVFKSSRSLLRHVQGHSGAR-TFKCEHENCGKSFVNQHNLTSHRRVHSEERNYVCELC 319

  Fly   410 GVGKTTRQEWNKHILTHTKEKKYECRQCDHASHNKQALANHVKVVHEKRKDFACQYCGKTFGKSH 474
            |.....|:....|..|||.||.::|:.|.....:|..|..| :.:|...|.:.|..|...|.:..
  Fly   320 GYRSRYREALIVHRRTHTGEKPFQCQTCARRFASKSLLNEH-QAMHSTEKPYKCDKCDSAFSRPK 383

  Fly   475 ACKIHERSHTGEKCCECKICGKVFLFEKGLTKHLKTHE-KRDLPKTQGTNA 524
            |...|:..|.|.|..:|||||..:....||:.|::.|: :..:..|:|..|
  Fly   384 ALYHHKHLHLGIKKFKCKICGNAYAQAAGLSAHMRAHKLQASVNATEGAEA 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D19BNP_477297.1 zf-AD 12..83 CDD:214871 6/31 (19%)
C2H2 Zn finger 255..275 CDD:275368 4/19 (21%)
SFP1 <266..365 CDD:227516 23/98 (23%)
C2H2 Zn finger 283..335 CDD:275368 13/51 (25%)
C2H2 Zn finger 318..338 CDD:275368 4/19 (21%)
COG5048 <347..512 CDD:227381 55/166 (33%)
C2H2 Zn finger 349..369 CDD:275368 7/19 (37%)
C2H2 Zn finger 378..398 CDD:275368 8/21 (38%)
C2H2 Zn finger 406..426 CDD:275368 5/19 (26%)
C2H2 Zn finger 434..455 CDD:275368 5/20 (25%)
C2H2 Zn finger 463..483 CDD:275368 5/19 (26%)
C2H2 Zn finger 491..511 CDD:275368 8/19 (42%)
C2H2 Zn finger 586..607 CDD:275368
C2H2 Zn finger 615..635 CDD:275368
zf-H2C2_2 627..652 CDD:463886
C2H2 Zn finger 643..663 CDD:275368
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 5/22 (23%)
COG5048 <258..416 CDD:227381 53/159 (33%)
C2H2 Zn finger 258..278 CDD:275368 7/19 (37%)
C2H2 Zn finger 289..308 CDD:275368 7/18 (39%)
C2H2 Zn finger 316..336 CDD:275368 5/19 (26%)
C2H2 Zn finger 344..364 CDD:275368 5/20 (25%)
C2H2 Zn finger 372..392 CDD:275368 5/19 (26%)
C2H2 Zn finger 400..420 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.

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