DRSC/TRiP Functional Genomics Resources

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Protein Alignment D19B and CG2120

DIOPT Version :9

Sequence 1:NP_477297.1 Gene:D19B / 38717 FlyBaseID:FBgn0022699 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_572446.2 Gene:CG2120 / 31737 FlyBaseID:FBgn0030005 Length:315 Species:Drosophila melanogaster


Alignment Length:319 Identity:84/319 - (26%)
Similarity:123/319 - (38%) Gaps:84/319 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   350 TECEKVFRCPTALKKHMYKHTGEELPFACEICGKRFPINSVLRDHLLRHAGIKNHVCPYCGVGKT 414
            |:..|..|.||. |:|  :.||::  ..|:||.:||.....||.|.:.|...|.|||..||.|..
  Fly    78 TDMCKPKRTPTT-KRH--RTTGKD--HTCDICDRRFSEAYNLRIHKMTHTDEKPHVCVECGKGFR 137

  Fly   415 TRQEWNKHILTHTKEKKYECRQCDHASHNKQALANHVKVVHEKRKDFACQYCGKTFGKSHACKIH 479
            ...:...|.:|||.|:.::                             |..|||.|..::...:|
  Fly   138 QLNKLRIHAVTHTAERPHK-----------------------------CDICGKGFRYANYLTVH 173

  Fly   480 ERSHTGEKCCECKICGKVFLFEKGLTKHLKTHEKRDLPKTQGTNALMGDGASGSSTIAKPSP-HL 543
            .|.|||||...|      ...:..|:.| ..|.:|...|.:  :|...|          |.| |.
  Fly   174 RRLHTGEKPYPC------LATDCHLSFH-SIHARRIHTKLR--HAAQTD----------PDPEHP 219

  Fly   544 RGRVERVDIAQLAGTVANPIPSVNLPSWSPQVNFTKKEGQHICPDCGKGFNHVSNMKLHYKVVHQ 608
            ....|:.|.:.|:.|                           ||.|.:.......:.:|.| .|.
  Fly   220 LAEQEQRDTSALSFT---------------------------CPVCSRVLTDQCYLSIHLK-RHY 256

  Fly   609 KVKDFCC--RFCPKRFAKKQYLRHHEYIHTGEKPYECKVCGKHFRQEQVLKTHMKVHDK 665
            ..:||.|  ..|.|||.....|:||:..||.::|:.|.:|...|.::...|.|:|||::
  Fly   257 NQRDFPCPQPECGKRFFSASELKHHQIAHTQQRPFACPLCPARFLRKSNHKQHLKVHER 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D19BNP_477297.1 zf-AD 12..83 CDD:214871
C2H2 Zn finger 255..275 CDD:275368
C2H2 Zn finger 283..335 CDD:275368
C2H2 Zn finger 318..338 CDD:275368
COG5048 <347..512 CDD:227381 45/161 (28%)
C2H2 Zn finger 349..369 CDD:275368 7/18 (39%)
C2H2 Zn finger 378..398 CDD:275368 8/19 (42%)
C2H2 Zn finger 406..426 CDD:275368 5/19 (26%)
C2H2 Zn finger 434..455 CDD:275368 0/20 (0%)
C2H2 Zn finger 463..483 CDD:275368 7/19 (37%)
C2H2 Zn finger 491..511 CDD:275368 3/19 (16%)
C2H2 Zn finger 586..607 CDD:275368 5/20 (25%)
C2H2 Zn finger 615..635 CDD:275368 8/21 (38%)
zf-H2C2_2 627..652 CDD:290200 9/24 (38%)
C2H2 Zn finger 643..663 CDD:275368 6/19 (32%)
CG2120NP_572446.2 C2H2 Zn finger 101..121 CDD:275368 8/19 (42%)
zf-H2C2_2 113..138 CDD:290200 11/24 (46%)
C2H2 Zn finger 129..149 CDD:275368 5/19 (26%)
zf-H2C2_2 142..166 CDD:290200 10/52 (19%)
COG5048 151..>264 CDD:227381 36/188 (19%)
C2H2 Zn finger 157..177 CDD:275368 7/19 (37%)
C2H2 Zn finger 185..206 CDD:275368 5/27 (19%)
C2H2 Zn finger 235..255 CDD:275368 5/20 (25%)
C2H2 Zn finger 263..285 CDD:275368 8/21 (38%)
C2H2 Zn finger 293..313 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446551
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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