DRSC/TRiP Functional Genomics Resources

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Protein Alignment D19B and CG2116

DIOPT Version :9

Sequence 1:NP_477297.1 Gene:D19B / 38717 FlyBaseID:FBgn0022699 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_572444.2 Gene:CG2116 / 31735 FlyBaseID:FBgn0030003 Length:598 Species:Drosophila melanogaster


Alignment Length:464 Identity:111/464 - (23%)
Similarity:180/464 - (38%) Gaps:84/464 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 DPLLNSKIEIIENEEDVFKMLESVEKEVE--------EVEMEMEQ-----PFGRVSQDDSFESGN 170
            |.::.|:::.:.::|   :|.:.|.:|::        |||.||||     .:|....:.|:....
  Fly    76 DFIVGSRVKDLTDDE---QMPQFVVRELDMSEVGDLVEVEPEMEQEADYGDYGDYEHEPSYGHPR 137

  Fly   171 DN-----DLDADFQISSDDDIPLAQRSRRGATR-GSKAKGKPKSAAKRQEEESEESEETSSSDDS 229
            ||     |||. :..||....|...|......: .|||:...:..|.|    |..|::  ::||.
  Fly   138 DNERVEEDLDM-YPPSSPSLPPSPPRPPSPVVQPASKARNSARQIALR----SFVSQK--NNDDD 195

  Fly   230 DGNPKD-KPKRKRIPATERD-RHRLIDCHIC-----HQKFKKAIRYEEHMKHHNDLLPFQCTVES 287
            ||:.|: ||..|.:...:.. |:.|.|..|.     .:.....:.:.......::.||.:|.:  
  Fly   196 DGSVKEVKPSEKMLEEFKGPRRYMLFDDLIATIVDFDEDSTPLVEFSMISDIMDEKLPVECGI-- 258

  Fly   288 CRKGFTTANGLRVHVEHAHTETSAMHPCTYEGCNKSFARPVLLSFHMKRVHKVDTPQRDFPCTEC 352
            |                    ...||        ||     .||.|.| .|.|....| :.|..|
  Fly   259 C--------------------PDVMH--------KS-----KLSKHHK-THLVPGTNR-YACIYC 288

  Fly   353 EKVFRCPTALKKHMYKHTGEELPFACEICGKRFPINSVLRDHLLRHAGIKNHVCPYCGVGKTTRQ 417
            .:.:|....|..|..:|.|.. |:.||:|...|.....||.|..|....|.|:|..||.......
  Fly   289 TETYRDCKYLAGHARRHMGIR-PYVCELCTLYFSTKQDLRVHNQRRHLEKEHICEVCGKTFAQNT 352

  Fly   418 EWNKH-ILTHTKEKKYECRQCDHASHNKQALANHVKVVH-EKRKDFACQYCGKTFGKSHACKIHE 480
            :..:| ..||.|:::::|..|..|.:...:|..|::.|| .||:...|.:||.....:|....|.
  Fly   353 QLKRHREATHEKKRRFQCEYCQKAYYKNFSLQEHIRNVHMGKRRMLKCPFCGMQCRDAHKMARHR 417

  Fly   481 RS-HTGEKCCECKICGKVFLFEKGLTKHLKTHEKRDLPKTQGTNALM-GDG-ASGSSTIAKPSPH 542
            :. |..:....|.:|.:.|........|     ||.:.....|...: .|| ..||.:.:....:
  Fly   418 KEMHLSQGTYVCHLCQEEFTDISYFDAH-----KRSIQCRSNTRRFVNADGNREGSDSESISGRN 477

  Fly   543 LRGRVERVD 551
            :.|:.:..|
  Fly   478 MNGQDDDYD 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D19BNP_477297.1 zf-AD 12..83 CDD:214871
C2H2 Zn finger 255..275 CDD:275368 1/24 (4%)
C2H2 Zn finger 283..335 CDD:275368 9/51 (18%)
C2H2 Zn finger 318..338 CDD:275368 6/19 (32%)
COG5048 <347..512 CDD:227381 44/167 (26%)
C2H2 Zn finger 349..369 CDD:275368 5/19 (26%)
C2H2 Zn finger 378..398 CDD:275368 7/19 (37%)
C2H2 Zn finger 406..426 CDD:275368 4/20 (20%)
C2H2 Zn finger 434..455 CDD:275368 5/20 (25%)
C2H2 Zn finger 463..483 CDD:275368 5/20 (25%)
C2H2 Zn finger 491..511 CDD:275368 4/19 (21%)
C2H2 Zn finger 586..607 CDD:275368
C2H2 Zn finger 615..635 CDD:275368
zf-H2C2_2 627..652 CDD:290200
C2H2 Zn finger 643..663 CDD:275368
CG2116NP_572444.2 C2H2 Zn finger 256..275 CDD:275368 10/54 (19%)
C2H2 Zn finger 285..305 CDD:275368 5/19 (26%)
PHA00733 <308..357 CDD:177301 14/49 (29%)
C2H2 Zn finger 313..334 CDD:275368 8/20 (40%)
C2H2 Zn finger 341..362 CDD:275368 4/20 (20%)
C2H2 Zn finger 370..388 CDD:275368 5/17 (29%)
C2H2 Zn finger 400..418 CDD:275370 5/17 (29%)
C2H2 Zn finger 429..447 CDD:275368 4/22 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449762
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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