DRSC/TRiP Functional Genomics Resources

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Protein Alignment D19B and CG11398

DIOPT Version :10

Sequence 1:NP_477297.1 Gene:D19B / 38717 FlyBaseID:FBgn0022699 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_569896.1 Gene:CG11398 / 31070 FlyBaseID:FBgn0040366 Length:329 Species:Drosophila melanogaster


Alignment Length:230 Identity:64/230 - (27%)
Similarity:93/230 - (40%) Gaps:31/230 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 QEEESEESEETSSSDDSDGNPKDKPKR-------KRIPATERDRHRLID----------CHICHQ 260
            :|.:.||..|.|..... |:|....:|       :...|..|..||...          |..|.:
  Fly    29 EELQFEELNERSQHQQG-GSPSFVCRRCPALFLTREELAAHRPTHRYQGGQQTPASEHACDACGR 92

  Fly   261 KFKKAIRYEEHMKHHNDLLPFQCTVESCRKGFTTANGLRVHVEHAHTETSAMHPCTYEGCNKSFA 325
            .|:|.....:||..|||:..:.|  ..|...|...:....|:::.|.:. .:|.|...||.|.|.
  Fly    93 VFQKHNALVDHMNAHNDVRNYPC--PECPARFVQRSNRECHLKNVHRKV-YLHSCPEPGCKKRFQ 154

  Fly   326 RPVLLSFHMKRVHKVDTPQRDFPCTECEKVFRCPTALKKHMYKHTGEELPFACEICGKRF--PIN 388
            :......|:|.||:   .:|:..|..|...|..|...:||:..| |....:.|.||||.|  |.|
  Fly   155 QRRECDQHVKTVHQ---NERNLVCDTCSARFSHPVNYRKHLASH-GSAKSYGCPICGKLFGRPEN 215

  Fly   389 SVLRD-HLLRHAGIKNHVCPYCGVGKTTRQEWNKH 422
               || ||..|:..|.::|..||.....|.:..:|
  Fly   216 ---RDVHLFVHSICKAYICSVCGADYMRRNQLIRH 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D19BNP_477297.1 zf-AD 12..83 CDD:214871
C2H2 Zn finger 255..275 CDD:275368 6/19 (32%)
SFP1 <266..365 CDD:227516 25/98 (26%)
C2H2 Zn finger 283..335 CDD:275368 12/51 (24%)
C2H2 Zn finger 318..338 CDD:275368 6/19 (32%)
COG5048 <347..512 CDD:227381 27/79 (34%)
C2H2 Zn finger 349..369 CDD:275368 6/19 (32%)
C2H2 Zn finger 378..398 CDD:275368 12/22 (55%)
C2H2 Zn finger 406..426 CDD:275368 5/17 (29%)
C2H2 Zn finger 434..455 CDD:275368
C2H2 Zn finger 463..483 CDD:275368
C2H2 Zn finger 491..511 CDD:275368
C2H2 Zn finger 586..607 CDD:275368
C2H2 Zn finger 615..635 CDD:275368
zf-H2C2_2 627..652 CDD:463886
C2H2 Zn finger 643..663 CDD:275368
CG11398NP_569896.1 C2H2 Zn finger 52..72 CDD:275368 3/19 (16%)
C2H2 Zn finger 87..107 CDD:275368 6/19 (32%)
C2H2 Zn finger 115..136 CDD:275368 4/22 (18%)
C2H2 Zn finger 144..165 CDD:275368 6/20 (30%)
C2H2 Zn finger 175..195 CDD:275368 6/19 (32%)
C2H2 Zn finger 203..223 CDD:275368 12/22 (55%)
C2H2 Zn finger 231..247 CDD:275368 4/15 (27%)
Blue background indicates that the domain is not in the aligned region.

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