DRSC/TRiP Functional Genomics Resources

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Protein Alignment D19B and Zfp668

DIOPT Version :10

Sequence 1:NP_477297.1 Gene:D19B / 38717 FlyBaseID:FBgn0022699 Length:774 Species:Drosophila melanogaster
Sequence 2:XP_017444703.1 Gene:Zfp668 / 309002 RGDID:1308623 Length:645 Species:Rattus norvegicus


Alignment Length:604 Identity:152/604 - (25%)
Similarity:229/604 - (37%) Gaps:151/604 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 PLAQRSRRGATRGSKAKGKPKSAAKRQEEESEESEETSSSDDSDGNPKDKPKRKRIP-------- 243
            |.|.|:.|.|...:......:....:.:.::|...|.:|.|...|:.. ||:....|        
  Rat    58 PNAPRAARHAATHTTTDCTEEVNEVQPKVDAEPKAEEASGDKVSGSVA-KPRPYACPLCPKAYKT 121

  Fly   244 ATERDRH-------RLIDCHICHQKFKKAIRYEEHMKHHNDLLPFQCTVESCRKGFTTANGLRVH 301
            |.|...|       :...|..|.::|.:.:....|:..|...|||:||  .|.|.:.|.:.|::|
  Rat   122 APELRSHGRSHTGEKPFPCPECGRRFMQPVCLRVHLASHAGELPFRCT--HCPKAYGTLSKLKIH 184

  Fly   302 VEHAHTETSAMHPCTYEGCNKSFARPVLLSFHMKRVH-------------------------KVD 341
             :..|| ....:.||  .|.||||.|.:...| :|.|                         :..
  Rat   185 -QRGHT-GERPYACT--DCGKSFADPSVFRKH-RRTHAGLRPYSCERCGKAYAELKDLRNHERSH 244

  Fly   342 TPQRDFPCTEC-------------------EKVFRCP---------TALKKHMYKHTGEELPFAC 378
            |.:|.|.|:||                   :|.:|||         ::.:.|...|:||: ||.|
  Rat   245 TGERPFLCSECGKSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQLSSYQSHERTHSGEK-PFLC 308

  Fly   379 EICGKRFPINSVLRDHLLRHAGIKNHVCPYCGVGKTTRQ--EWNKHILTHTKEKKYECRQCDHAS 441
            ..||:.|...|..|.|...|.|:|.:.|..|  ||..||  :...|...||.::.::|.|||...
  Rat   309 PRCGRMFSDPSSFRRHQRAHEGVKPYRCEKC--GKDFRQPADLAMHRRVHTGDRPFKCLQCDKTF 371

  Fly   442 HNKQALANHVKVVHEKRKDFACQYCGKTFGKSHACKIHERSHTGEKCCECKICGKVFLFEKGLTK 506
            .....|..|. :||..::.|.|:.||:.|.:..:...|.|.|:||:...|..|||.|:....|.|
  Rat   372 VASWDLKRHA-LVHSGQRPFRCEECGRAFAERASLTKHSRMHSGERPFHCNACGKSFVVLSSLRK 435

  Fly   507 HLKTHEKRDLPKTQGTNALMGDGASGSSTIAKPSPHL-------RGRVERVDIAQLAGTVANPIP 564
            |.:||.                  |..:|.|.|...|       .|.|.....|.:||......|
  Rat   436 HERTHR------------------SNETTGAAPQQELVLGLALPVGVVGEGSAAPVAGAGIGDAP 482

  Fly   565 S--VNLPSWSPQVNFT--------------------------------------KKEGQHICPDC 589
            :  :.||..|..|..|                                      :|..|.:|.:|
  Rat   483 AGLLGLPPESGSVVATQWQVVGMTVEHVECQDAGVGEAPSTLGDAGEVGGEETDEKPPQFVCREC 547

  Fly   590 GKGFNHVSNMKLHYKVVHQKVKDFCCRFCPKRFAKKQYLRHHEYIHTGEKPYECKVCGKHFRQEQ 654
            .:.|:.::.::.|.: .|.:::.|.|..|.|.|:.:..||.|...|:..:||.|..|.|.|....
  Rat   548 KETFSTLTLLRRHER-SHPELRPFPCTQCGKSFSDRAGLRKHSRTHSSVRPYSCSQCPKAFLSAS 611

  Fly   655 VLKTHMKVHDKPPRPPGKP 673
            .|:.|.:.|   |.|.|.|
  Rat   612 DLRKHERTH---PVPIGTP 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D19BNP_477297.1 zf-AD 12..83 CDD:214871
C2H2 Zn finger 255..275 CDD:275368 4/19 (21%)
SFP1 <266..365 CDD:227516 35/151 (23%)
C2H2 Zn finger 283..335 CDD:275368 18/51 (35%)
C2H2 Zn finger 318..338 CDD:275368 8/19 (42%)
COG5048 <347..512 CDD:227381 60/194 (31%)
C2H2 Zn finger 349..369 CDD:275368 8/47 (17%)
C2H2 Zn finger 378..398 CDD:275368 7/19 (37%)
C2H2 Zn finger 406..426 CDD:275368 7/21 (33%)
C2H2 Zn finger 434..455 CDD:275368 6/20 (30%)
C2H2 Zn finger 463..483 CDD:275368 6/19 (32%)
C2H2 Zn finger 491..511 CDD:275368 8/19 (42%)
C2H2 Zn finger 586..607 CDD:275368 4/20 (20%)
C2H2 Zn finger 615..635 CDD:275368 7/19 (37%)
zf-H2C2_2 627..652 CDD:463886 10/24 (42%)
C2H2 Zn finger 643..663 CDD:275368 6/19 (32%)
Zfp668XP_017444703.1 C2H2 Zn finger 50..70 CDD:275368 5/11 (45%)
COG5048 91..445 CDD:227381 102/383 (27%)
C2H2 Zn finger 112..132 CDD:275368 4/19 (21%)
C2H2 Zn finger 140..160 CDD:275368 4/19 (21%)
C2H2 Zn finger 168..188 CDD:275368 7/22 (32%)
C2H2 Zn finger 196..216 CDD:275368 10/22 (45%)
C2H2 Zn finger 224..244 CDD:275368 0/19 (0%)
C2H2 Zn finger 252..272 CDD:275368 3/19 (16%)
COG5048 274..624 CDD:227381 99/375 (26%)
C2H2 Zn finger 280..300 CDD:275368 3/19 (16%)
C2H2 Zn finger 308..328 CDD:275368 7/19 (37%)
C2H2 Zn finger 336..356 CDD:275368 7/21 (33%)
C2H2 Zn finger 364..384 CDD:275368 6/20 (30%)
C2H2 Zn finger 392..412 CDD:275368 6/19 (32%)
C2H2 Zn finger 420..440 CDD:275368 8/19 (42%)
C2H2 Zn finger 544..564 CDD:275368 4/20 (20%)
C2H2 Zn finger 572..592 CDD:275368 7/19 (37%)
C2H2 Zn finger 600..620 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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