DRSC/TRiP Functional Genomics Resources

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Protein Alignment D19B and znf-782

DIOPT Version :9

Sequence 1:NP_477297.1 Gene:D19B / 38717 FlyBaseID:FBgn0022699 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_500033.1 Gene:znf-782 / 190310 WormBaseID:WBGene00021931 Length:662 Species:Caenorhabditis elegans


Alignment Length:560 Identity:133/560 - (23%)
Similarity:211/560 - (37%) Gaps:148/560 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 DNVHF-DPLLNSKIEIIENEEDVFKMLESVEKEVEEVEMEMEQPFGRVSQDDSFESGNDNDLDAD 177
            |::|. ||           ||:.|   |..|.|:.|.|.|.::....:...||          |.
 Worm    17 DDIHMKDP-----------EEEEF---EEYEDELLEEEEEFDEELEELENSDS----------AS 57

  Fly   178 FQISSDDDIPLAQRSRRGATRGSKAKGKPKSAAKRQEEESEESEETSSSDDSDGNPKDKPKRKRI 242
            ..:|:            |:..||.:......::...:.:|     .|....|.|:|..:|:::.|
 Worm    58 SLVSA------------GSPHGSSSSNGSHGSSPPLQVQS-----PSQGSGSSGSPTGQPEKRHI 105

  Fly   243 PATERDRHRLIDCHICHQKFKKAIRYEEHMKHHNDLLPFQCTVESCRKGFTTANGLRVHVEHAHT 307
                        |.:|.:.|......|.|.:.|....|:.|  ..|:|.|.....|:|| |..||
 Worm   106 ------------CTVCGKGFSYFSILESHKRSHTGEKPYNC--HFCQKTFAQKATLQVH-ERTHT 155

  Fly   308 ETSAMHPCTYEGCNKSFARPVLLSFHMKRVHKVDTPQRDFPCTECEKVFRCPTALKKHMYKHTGE 372
             ....:.|.|  |.|:||:....:.|.|..|   ...|::.|.:|:|:...|:||..|  |.|..
 Worm   156 -GERPYKCRY--CEKTFAQYGTKTVHEKSAH---LGIRNYKCPKCDKLLSSPSALYTH--KKTHG 212

  Fly   373 ELPFACEICGKRFPINSVLRDHL--LRHAGIKNHVCPYCGVGKTTRQEWNKHILTHTKEKKYECR 435
            :..|.|:.|.|.|.:.:.|:.|:  :.....:.|||.||..|.........|:.|||.|:.|   
 Worm   213 DKTFRCDFCPKTFALKNYLKLHVKQVHEQNERKHVCVYCNKGFAYAGSLQVHVRTHTGERPY--- 274

  Fly   436 QCDHASHNKQALANHVKVVHEKRKDFACQYCGKTFGKSHACKIHERSHTGEKCCECKICGKVFLF 500
                                      .|::|.|.|......:.|||:||||:...|:.|.:.|:.
 Worm   275 --------------------------VCKFCPKAFASQGNLQSHERTHTGERPYSCQFCQRTFIQ 313

  Fly   501 EKGLTKHLKTHEKRDLPKTQGTNALMGDGASGSSTIAKPSPHLRGRVERVDIAQLAGTVANPIPS 565
            :..||.|..||    |.:....|.        .||.|             ||..:||:|.:    
 Worm   314 KSQLTAHESTH----LTQKHSVNP--------DSTTA-------------DILPVAGSVTD---- 349

  Fly   566 VNLPSWSPQVNFTKKEGQHICPDCGKGFNHVSNMKLHYKVVHQKVKDFCCRFCPKRFAKKQYLRH 630
                        .:..|.:.|..|.|.:.:.|::.:|.: .|.:...:.|..|.|.:::|..|..
 Worm   350 ------------HQMVGNYECTFCNKKYPYASSLYIHMR-KHTEKSAYSCDGCGKPYSQKISLNI 401

  Fly   631 HE--------YIHTGEKPY--ECKVCGKHFRQEQVLKTHM 660
            |:        .:.|.:..:  .|..|||.|.|...|:.|:
 Worm   402 HQDQCEAFKNRLKTTDSQFSHNCDGCGKSFVQRIALQIHV 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
D19BNP_477297.1 zf-AD 12..83 CDD:214871
C2H2 Zn finger 255..275 CDD:275368 5/19 (26%)
C2H2 Zn finger 283..335 CDD:275368 17/51 (33%)
C2H2 Zn finger 318..338 CDD:275368 6/19 (32%)
COG5048 <347..512 CDD:227381 46/166 (28%)
C2H2 Zn finger 349..369 CDD:275368 7/19 (37%)
C2H2 Zn finger 378..398 CDD:275368 6/21 (29%)
C2H2 Zn finger 406..426 CDD:275368 5/19 (26%)
C2H2 Zn finger 434..455 CDD:275368 0/20 (0%)
C2H2 Zn finger 463..483 CDD:275368 7/19 (37%)
C2H2 Zn finger 491..511 CDD:275368 6/19 (32%)
C2H2 Zn finger 586..607 CDD:275368 5/20 (25%)
C2H2 Zn finger 615..635 CDD:275368 6/27 (22%)
zf-H2C2_2 627..652 CDD:290200 8/34 (24%)
C2H2 Zn finger 643..663 CDD:275368 8/18 (44%)
znf-782NP_500033.1 C2H2 Zn finger 106..126 CDD:275368 5/19 (26%)
zf-H2C2_2 119..143 CDD:290200 8/25 (32%)
C2H2 Zn finger 134..154 CDD:275368 8/22 (36%)
zf-H2C2_2 147..171 CDD:290200 11/27 (41%)
C2H2 Zn finger 162..180 CDD:275368 7/19 (37%)
COG5048 <187..404 CDD:227381 71/289 (25%)
C2H2 Zn finger 191..211 CDD:275370 8/21 (38%)
C2H2 Zn finger 218..239 CDD:275368 6/20 (30%)
C2H2 Zn finger 248..268 CDD:275368 5/19 (26%)
zf-H2C2_2 260..285 CDD:290200 10/53 (19%)
C2H2 Zn finger 276..296 CDD:275368 7/19 (37%)
zf-H2C2_2 288..313 CDD:290200 10/24 (42%)
C2H2 Zn finger 304..324 CDD:275368 6/19 (32%)
C2H2 Zn finger 386..403 CDD:275368 5/16 (31%)
C2H2 Zn finger 424..441 CDD:275368 7/16 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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