DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10274 and CG8301

DIOPT Version :10

Sequence 1:NP_001097525.1 Gene:CG10274 / 38716 FlyBaseID:FBgn0035690 Length:863 Species:Drosophila melanogaster
Sequence 2:NP_649915.1 Gene:CG8301 / 41160 FlyBaseID:FBgn0037717 Length:607 Species:Drosophila melanogaster


Alignment Length:600 Identity:131/600 - (21%)
Similarity:230/600 - (38%) Gaps:156/600 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 SLAVEQSDGFPKCLCAQCFSRLDDMHEFQKLCVDSVQKFQDMVARNVFCPPASAQMKNFDLLNVA 114
            :|.:..:||.|:.:|:.||::...::.|:..|.::..|...:                :|.::.:
  Fly    49 NLKISPNDGLPQKICSDCFTKFCSINAFRLACQEAQLKLSHI----------------YDKIDAS 97

  Fly   115 GNEPELVGQDEEDRINFDPLLDHKMEMIENEEDVFKMLEHVDKEAEQVEKEVKQDEL--DAADLM 177
            ..|.:.:||::     .:|..:|:      |.:..|....|..|.:.........|:  ||.|:.
  Fly    98 SLEDDEIGQED-----LEPAEEHQ------ETETTKPTTTVSAETQPNNTASDPIEIFVDAVDID 151

  Fly   178 TIFAAESSEESEEDIDQDVDFEPNSSDGDDDVP----------LAQRLRDNSRMIPKAKAAVIKE 232
            .....|..||.::..|::|: ||.:   |:..|          ...|.::|.::.......:...
  Fly   152 EAEEEEEEEEQQQQYDEEVE-EPIT---DESAPPQLTISYACKFCLRPQENYQLQQLLLEHINAS 212

  Fly   233 EDQEFPTGSEEEDEDGEKSKSRRKRIPP----------------GERH--LHRI--------IDC 271
            .|.|.|....|.:...:.:.||...:..                |:||  .|.:        .:|
  Fly   213 HDPEQPYNCPECEARFQDAASRTVHLKSSHVEKQHACGVCGKKYGDRHNLRHHVEKYHSETDFEC 277

  Fly   272 HICHQKF--KKAIRYEEHMKHHNDLLPFQCKVETCRKGFTTAGGLRLH-IDHAHTELSEVHSCNV 333
            .:|.::|  :|::.|  |||.||....|:|:...|.:.|.:...|..| ..|:.|...:...|..
  Fly   278 ALCEKRFYTRKSLNY--HMKWHNPDRQFKCRHSGCERLFISQRHLMCHEATHSGTSSRKSEHCGF 340

  Fly   334 DGCGKTFPRIRLLTFHMKKMHGITKAAAPPRDYPCTECEKVFRCPMALKKHMYKHDGKELP---- 394
              |||||..::.|.:|:.:.||..|      .|.|..|.:||......:.||.:...:.|.    
  Fly   341 --CGKTFIHLKTLRWHIYRQHGGEK------PYKCANCTEVFASYAEKRIHMLERHRENLTAIER 397

  Fly   395 ---------------------------------------------------FPCNICGKRFVINS 408
                                                               |.|..|.:||.:.|
  Fly   398 SECMLCRQPFSSEPDLIHHMSAEHLQRPGAPIIANNKRVLQQKRERQYSGLFQCGSCSQRFNMKS 462

  Fly   409 ALKDHLMRHAGI-----KNYVCPYCGVGKTTRQEWNTHILTHTQEKKFKCHICEHASHNKQSLAN 468
            ||:    |||.:     :.:.||:|.......|:...||.||.:||...|.:|..|...|..|..
  Fly   463 ALE----RHAAVHSEKDRPHACPHCSKRFKRAQDMKWHIKTHEKEKPNVCDVCGKAFALKYVLTQ 523

  Fly   469 HIKIVHEKI-KNYACQYCGKTFGKSHACKIHEMTHTGEKRCECKVCGKKFLYPKSLTKH--LKTH 530
            | ::.||.: ||:.|..||:.:....:.::|:.||||:...:|.:|.::|:      .|  ||||
  Fly   524 H-RLSHEVLEKNFKCNVCGRAYLFEKSLRLHQRTHTGKTYYKCDLCQERFV------THIKLKTH 581

  Fly   531 EKRVLRAIETYRQRQ 545
            .::...|.:.:...|
  Fly   582 MQKAHAASQPHSADQ 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10274NP_001097525.1 zf-AD 15..90 CDD:214871 10/39 (26%)
C2H2 Zn finger 334..353 CDD:275368 7/18 (39%)
C2H2 Zn finger 368..388 CDD:275368 6/19 (32%)
COG5048 394..729 CDD:227381 48/214 (22%)
C2H2 Zn finger 397..417 CDD:275368 7/19 (37%)
C2H2 Zn finger 425..445 CDD:275368 6/19 (32%)
C2H2 Zn finger 453..474 CDD:275368 6/20 (30%)
C2H2 Zn finger 482..502 CDD:275368 4/19 (21%)
C2H2 Zn finger 510..530 CDD:275368 6/21 (29%)
C2H2 Zn finger 638..659 CDD:275368
C2H2 Zn finger 667..687 CDD:275368
C2H2 Zn finger 695..715 CDD:275368
CG8301NP_649915.1 zf-AD 3..88 CDD:462262 10/38 (26%)
COG5048 198..>508 CDD:227381 69/323 (21%)
C2H2 Zn finger 221..241 CDD:275368 3/19 (16%)
C2H2 Zn finger 249..269 CDD:275368 4/19 (21%)
C2H2 Zn finger 277..297 CDD:275368 8/21 (38%)
C2H2 Zn finger 305..327 CDD:275368 5/21 (24%)
C2H2 Zn finger 338..359 CDD:275368 8/22 (36%)
C2H2 Zn finger 367..384 CDD:275368 4/16 (25%)
C2H2 Zn finger 400..420 CDD:275368 0/19 (0%)
C2H2 Zn finger 451..471 CDD:275368 10/23 (43%)
C2H2 Zn finger 480..500 CDD:275368 6/19 (32%)
C2H2 Zn finger 508..528 CDD:275368 6/20 (30%)
SUF4-like 536..>586 CDD:411020 16/55 (29%)
C2H2 Zn finger 537..558 CDD:411020 5/20 (25%)
C2H2 Zn finger 537..557 CDD:275368 4/19 (21%)
C2H2 Zn finger 565..586 CDD:411020 8/26 (31%)
C2H2 Zn finger 565..582 CDD:275368 7/22 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.