DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10274 and crol

DIOPT Version :9

Sequence 1:NP_001097525.1 Gene:CG10274 / 38716 FlyBaseID:FBgn0035690 Length:863 Species:Drosophila melanogaster
Sequence 2:NP_001245993.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster


Alignment Length:685 Identity:162/685 - (23%)
Similarity:245/685 - (35%) Gaps:179/685 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 ERHLHR-----IIDCHICHQKFKKAIRYEEHMKHHNDLLPFQC---------------------- 299
            |||:.|     ...|.||.:.|.:....:.|.:.|....||:|                      
  Fly   293 ERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTG 357

  Fly   300 ----KVETCRKGFTTAGGLRLHIDHA--HTELSEVHSCNVDGCGKTFPRIRLLTFHMKKMHGITK 358
                :.:.|:|.||..   ..:::|.  ||..:. |.|:|  |||.:.|...|..||:.....| 
  Fly   358 ETPHRCDICKKSFTRK---EHYVNHYMWHTGQTP-HQCDV--CGKKYTRKEHLANHMRSHTNET- 415

  Fly   359 AAAPPRDYPCTECEKVFRCPMALKKHMYKHDGKELPFPCNICGKRFVINSALKDHLMRHAGIKNY 423
                  .:.|..|.|.|........|:..|.| |.|..|:.|.|.|.....|.:|:.:|.|...:
  Fly   416 ------PFRCEICGKSFSRKEHFTNHILWHTG-ETPHRCDFCSKTFTRKEHLLNHVRQHTGESPH 473

  Fly   424 VCPYCGVGKTTRQEWNTHILTHTQEKKFKCHICEHASHNKQSLANHIKIVHEKIKNYACQYCGKT 488
            .|.||....|.::....||..||.|..|||..|..|...|..:.||:: .|.....:.|.||.||
  Fly   474 RCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVR-QHTGESPHKCTYCTKT 537

  Fly   489 FGKSHACKIHEMTHTGEKRCECKVCGKKFLYPKSLTKHLKTHEKRVLRAIETYRQRQVEMGETPG 553
            |.:......|...|||:....|..|.|.|...:.||.|::.|........| |.|:..    |..
  Fly   538 FTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCE-YCQKTF----TRK 597

  Fly   554 EQFDNPPAPPVEGISIEPIMSRNAAD--ELLKVCAESVATIPKDPRRVQRVDLAQLAGTAVNPIP 616
            |..:|.             |.::::|  ....||.:...      |:...::......|...|  
  Fly   598 EHLNNH-------------MRQHSSDNPHCCNVCNKPFT------RKEHLINHMSRCHTGDRP-- 641

  Fly   617 SVSVPSWSPQVNFTKKEGKHICPGCGQGFNNIGNMKRHYKIIHEKVKD----FACRFCPKRFAKA 677
                        ||       |..||:.|...||:..|.: .|.|.::    |||..|||.|...
  Fly   642 ------------FT-------CETCGKSFPLKGNLLFHQR-SHTKGQEMERPFACEKCPKNFICK 686

  Fly   678 QTLRHHEWIHTGEKPFECKTCGTHFRQETALKRHQR--------------THENRP--------- 719
            ..|..|...|:||||..|..|...|.:...||||.:              .|...|         
  Fly   687 GHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQ 751

  Fly   720 ---PVISPKFYA------------------------------------AREELEEQERSKREAKR 745
               |:|.|...|                                    :.....:|:..|::|..
  Fly   752 EVKPIIIPHHSATTTMHTIQQITAGAAGGAGAVQLTPGLVPLVTSTLISHNAAAQQQSQKQQAAA 816

  Fly   746 QADAKRREIAEAAKEQLSSLHKLESSDRSLHSYDEYQEAA---AERAAASAELQAQQFEENE--- 804
            .|.|:::..|.||.:|.::    :....:.|...:.|.||   .:.|.|:.:.|.||.::.:   
  Fly   817 AAAAQQQAAAAAAAQQQAA----QQQAAAAHQQHQQQVAAQHQQQAAVAAHQQQQQQLQQQQQLL 877

  Fly   805 ---VKRLA----EEERRKVQEAAYEQLQLLQHQQE 832
               :::.|    :|:.|:.|:..::|.|..||.|:
  Fly   878 QLSIQQAAHHHQQEQHRQQQQQQHQQQQQQQHHQQ 912

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10274NP_001097525.1 zf-AD 15..90 CDD:214871
C2H2 Zn finger 334..353 CDD:275368 7/18 (39%)
C2H2 Zn finger 368..388 CDD:275368 5/19 (26%)
COG5048 394..729 CDD:227381 96/402 (24%)
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)
C2H2 Zn finger 425..445 CDD:275368 6/19 (32%)
C2H2 Zn finger 453..474 CDD:275368 6/20 (30%)
C2H2 Zn finger 482..502 CDD:275368 7/19 (37%)
C2H2 Zn finger 510..530 CDD:275368 7/19 (37%)
C2H2 Zn finger 638..659 CDD:275368 7/20 (35%)
C2H2 Zn finger 667..687 CDD:275368 7/19 (37%)
zf-H2C2_2 680..704 CDD:290200 10/23 (43%)
C2H2 Zn finger 695..715 CDD:275368 7/33 (21%)
crolNP_001245993.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368
C2H2 Zn finger 279..299 CDD:275368 3/5 (60%)
COG5048 300..723 CDD:227381 125/483 (26%)
C2H2 Zn finger 307..327 CDD:275368 5/19 (26%)
C2H2 Zn finger 335..355 CDD:275368 1/19 (5%)
C2H2 Zn finger 363..383 CDD:275368 5/22 (23%)
C2H2 Zn finger 391..411 CDD:275368 9/21 (43%)
C2H2 Zn finger 419..439 CDD:275368 5/19 (26%)
C2H2 Zn finger 447..467 CDD:275368 6/19 (32%)
C2H2 Zn finger 475..495 CDD:275368 6/19 (32%)
C2H2 Zn finger 503..523 CDD:275368 6/20 (30%)
C2H2 Zn finger 531..551 CDD:275368 7/19 (37%)
C2H2 Zn finger 559..579 CDD:275368 7/19 (37%)
C2H2 Zn finger 587..607 CDD:275368 7/37 (19%)
C2H2 Zn finger 615..636 CDD:275368 3/26 (12%)
C2H2 Zn finger 644..664 CDD:275368 7/20 (35%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..722 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446646
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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