DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10274 and CG17612

DIOPT Version :9

Sequence 1:NP_001097525.1 Gene:CG10274 / 38716 FlyBaseID:FBgn0035690 Length:863 Species:Drosophila melanogaster
Sequence 2:NP_608824.1 Gene:CG17612 / 33639 FlyBaseID:FBgn0031597 Length:618 Species:Drosophila melanogaster


Alignment Length:599 Identity:137/599 - (22%)
Similarity:216/599 - (36%) Gaps:138/599 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KKLCVC----TSLAVEQSDGFPKCLCAQCF---------------SRLDDMHEFQKLCVDSVQKF 88
            :.:|.|    ..|:|::....||.||.||.               ::::|     |:.::.....
  Fly     2 ENVCQCCKVRPGLSVKRGGSLPKTLCLQCLHMDTFGTKHKGPRPETQIND-----KVHLEMSING 61

  Fly    89 QDMVARNVFCPPASAQMKNFDLL--------NVAGNEPELVGQD--------EEDRINFDPLL-- 135
            :|.:..:...|.....:|..|.|        |...|| |::|..        |..|.|.|.:|  
  Fly    62 EDGLPEHPLYPEVQLVVKEEDALIKKKVIEENHIHNE-EIIGASNIVDVEVHENHRANNDVILIQ 125

  Fly   136 DHKMEMIENEE-----DVFKMLEHVDKEAEQVEKEVKQDELDAADLM--TIFAAESSEESE---- 189
            |...|.:..|:     ||..:.:.|   ||:....:|::.::..||.  .....|..||..    
  Fly   126 DSFAEEVILEDHPANNDVIIIQDSV---AEEELPVIKEEAIEGEDLQGEYFIITECLEEPAIGSC 187

  Fly   190 ----EDIDQDVDFEPNSSDGDDD-----VPLAQRLRDNSRMIPKAKAAVIKE------------- 232
                |..|       |.::..||     :|:|..|...:.| |..|.....|             
  Fly   188 RVCLEQSD-------NLTNIFDDAHQYGIPIATILSQYTGM-PVEKGDSFSEYICVTCLDVVKNA 244

  Fly   233 -EDQEFPTGS-------EEEDEDGEKSKSRRKRI-------PPGERHLHRIIDCHICHQKFKKAI 282
             :|.|....:       :||..|.:....:.|.:       ||     ||   |..|.:.|..|.
  Fly   245 FDDLESKENTIQMYRQPKEEIIDIDSIPVKNKPVDYEVTGKPP-----HR---CPQCPKIFLLAA 301

  Fly   283 RYEEHMKHHNDLL---PFQCKVETCRKGFTTAGGLRLHI------DHAHTELSEVHSCNVDGCGK 338
            :.:.|::.||:..   |.:.|...|...:...|.|..|:      |...:||...:.|  ..|.|
  Fly   302 KLQAHIRTHNETRTTEPPRLKCPMCPSIYMKRGCLEAHMWIHRASDERESELEPPYRC--PHCPK 364

  Fly   339 TFPRIRLLTFHMKKMHGITKAAAPPRDYPCTECEKVFRCPMALKKHMYKHDGKELPFPCNICGKR 403
            .|.....|..|::....:::..:....:.|.:|..||....:||.|:..|.| |..|.|.:|...
  Fly   365 LFLYSSFLEIHIQTHEDVSQRLSRKSSHKCAQCADVFSDVSSLKDHVKIHAG-ERTFKCPLCLMS 428

  Fly   404 FVINSALKDHLMRHAGIKNYVCPYCGVGKTTRQEWNTHI-LTHTQEKKFKCHICEHASHNKQSLA 467
            |...|.||.|...|...|   |..|.....::...:.|. .:||.:..|||..|:.....:..|.
  Fly   429 FQEESNLKSHDCAHTRFK---CHKCSKFFESQNYLDFHFKKSHTTKGPFKCIKCQQTFQKRNGLK 490

  Fly   468 NHI------KIVHEKIKN--YACQYCGKTFGKSHACKIHEMTH----TGEKRCECKVCGKKFLYP 520
            .||      :.:..|...  :.|..|.|.|......::|..||    |..:|..|..|.|.:...
  Fly   491 EHISSQVCVQFLRSKSPGQIFPCPKCPKKFSIEDNYQMHHATHKKVKTVIERHNCTQCKKSYQNK 555

  Fly   521 KSLTKHLKTHEKRV 534
            |.||||:.:|.:.|
  Fly   556 KLLTKHILSHNRCV 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10274NP_001097525.1 zf-AD 15..90 CDD:214871 12/65 (18%)
C2H2 Zn finger 334..353 CDD:275368 5/18 (28%)
C2H2 Zn finger 368..388 CDD:275368 7/19 (37%)
COG5048 394..729 CDD:227381 42/154 (27%)
C2H2 Zn finger 397..417 CDD:275368 7/19 (37%)
C2H2 Zn finger 425..445 CDD:275368 3/20 (15%)
C2H2 Zn finger 453..474 CDD:275368 5/26 (19%)
C2H2 Zn finger 482..502 CDD:275368 5/19 (26%)
C2H2 Zn finger 510..530 CDD:275368 8/19 (42%)
C2H2 Zn finger 638..659 CDD:275368
C2H2 Zn finger 667..687 CDD:275368
zf-H2C2_2 680..704 CDD:290200
C2H2 Zn finger 695..715 CDD:275368
CG17612NP_608824.1 zf-AD 187..>246 CDD:285071 12/66 (18%)
C2H2 Zn finger 290..310 CDD:275368 5/19 (26%)
C2H2 Zn finger 323..343 CDD:275370 4/19 (21%)
zf-C2H2_8 356..438 CDD:292531 23/84 (27%)
C2H2 Zn finger 359..379 CDD:275368 6/21 (29%)
C2H2 Zn finger 394..414 CDD:275368 7/19 (37%)
C2H2 Zn finger 422..438 CDD:275368 6/15 (40%)
C2H2 Zn finger 447..463 CDD:275368 2/15 (13%)
C2H2 Zn finger 476..505 CDD:275368 5/28 (18%)
C2H2 Zn finger 513..533 CDD:275368 5/19 (26%)
C2H2 Zn finger 545..565 CDD:275368 8/19 (42%)
C2H2 Zn finger 568..584 CDD:275368 1/2 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449786
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.