DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10274 and znf-782

DIOPT Version :9

Sequence 1:NP_001097525.1 Gene:CG10274 / 38716 FlyBaseID:FBgn0035690 Length:863 Species:Drosophila melanogaster
Sequence 2:NP_500033.1 Gene:znf-782 / 190310 WormBaseID:WBGene00021931 Length:662 Species:Caenorhabditis elegans


Alignment Length:643 Identity:131/643 - (20%)
Similarity:207/643 - (32%) Gaps:237/643 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 KEAEQVEKEVKQDELDAADLMTIFAAESSEESEEDIDQDVDFEPNSSDGDDDVPLAQRLRDNSRM 221
            |:.|:.|.|..:|||              .|.||:.|::::...||              |::..
 Worm    22 KDPEEEEFEEYEDEL--------------LEEEEEFDEELEELENS--------------DSASS 58

  Fly   222 IPKAKAAVIKEEDQEFPTGSEEEDEDGEKSKSRRKRIP-------------PGERHLHRIIDCHI 273
            :..|.:          |.||...:.....|...:.:.|             |.:||:     |.:
 Worm    59 LVSAGS----------PHGSSSSNGSHGSSPPLQVQSPSQGSGSSGSPTGQPEKRHI-----CTV 108

  Fly   274 CHQKFKKAIRYEEHMKHHNDLLPFQCKVETCRKGFTTAGGLRLHIDHAHTELSEVHSCNVDGCGK 338
            |.:.|......|.|.:.|....|:.|  ..|:|.|.....|::| :..||. ...:.|..  |.|
 Worm   109 CGKGFSYFSILESHKRSHTGEKPYNC--HFCQKTFAQKATLQVH-ERTHTG-ERPYKCRY--CEK 167

  Fly   339 TFPRIRLLTFHMKKMH-GITKAAAPPRDYPCTECEKVFRCPMALKKHMYKHDGKELPFPCNICGK 402
            ||.:....|.|.|..| ||       |:|.|.:|:|:...|.||..|...|..|  .|.|:.|.|
 Worm   168 TFAQYGTKTVHEKSAHLGI-------RNYKCPKCDKLLSSPSALYTHKKTHGDK--TFRCDFCPK 223

  Fly   403 RFVINSALKDHL--MRHAGIKNYVCPYCGVGKTTRQEWNTHILTHTQEKKFKCHICEHASHNKQS 465
            .|.:.:.||.|:  :.....:.:||.||..|.........|:.|||.|:.               
 Worm   224 TFALKNYLKLHVKQVHEQNERKHVCVYCNKGFAYAGSLQVHVRTHTGERP--------------- 273

  Fly   466 LANHIKIVHEKIKNYACQYCGKTFGKSHACKIHEMTHTGEKRCECKVCGKKFLYPKSLTKHLKTH 530
                          |.|::|.|.|......:.||.|||||:...|:.|.:.|:....||.|..||
 Worm   274 --------------YVCKFCPKAFASQGNLQSHERTHTGERPYSCQFCQRTFIQKSQLTAHESTH 324

  Fly   531 EKRVLRAIETYRQRQVEMGETPGEQFDNPPAPPVEGISIEPIMSRNAADELLKVCAESVATIPKD 595
                      ..|:.                      |:.|               :|..     
 Worm   325 ----------LTQKH----------------------SVNP---------------DSTT----- 337

  Fly   596 PRRVQRVDLAQLAGTAVNPIPSVSVPSWSPQVNFTKKEGKHICPGCGQGFNNIGNMKRHYKIIHE 660
                  .|:..:||:..:                                             |:
 Worm   338 ------ADILPVAGSVTD---------------------------------------------HQ 351

  Fly   661 KVKDFACRFCPKRFAKAQTLRHHEWIHTGEKPFECKTCGTHFRQETALKRHQ---RTHENRPPVI 722
            .|.::.|.||.|::..|.:|..|...||.:..:.|..||..:.|:.:|..||   ...:||....
 Worm   352 MVGNYECTFCNKKYPYASSLYIHMRKHTEKSAYSCDGCGKPYSQKISLNIHQDQCEAFKNRLKTT 416

  Fly   723 SPKF----------------------------YAAREELEEQERSKREAKRQADAKRR 752
            ..:|                            ..||.:|.:|:...:.:..::|.:.:
 Worm   417 DSQFSHNCDGCGKSFVQRIALQIHVDSCEPHKNLARLKLSQQQNQNQNSDSESDTEMK 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10274NP_001097525.1 zf-AD 15..90 CDD:214871
C2H2 Zn finger 334..353 CDD:275368 7/18 (39%)
C2H2 Zn finger 368..388 CDD:275368 7/19 (37%)
COG5048 394..729 CDD:227381 66/367 (18%)
C2H2 Zn finger 397..417 CDD:275368 7/21 (33%)
C2H2 Zn finger 425..445 CDD:275368 5/19 (26%)
C2H2 Zn finger 453..474 CDD:275368 0/20 (0%)
C2H2 Zn finger 482..502 CDD:275368 6/19 (32%)
C2H2 Zn finger 510..530 CDD:275368 6/19 (32%)
C2H2 Zn finger 638..659 CDD:275368 0/20 (0%)
C2H2 Zn finger 667..687 CDD:275368 7/19 (37%)
zf-H2C2_2 680..704 CDD:290200 7/23 (30%)
C2H2 Zn finger 695..715 CDD:275368 7/22 (32%)
znf-782NP_500033.1 C2H2 Zn finger 106..126 CDD:275368 5/19 (26%)
zf-H2C2_2 119..143 CDD:290200 8/25 (32%)
C2H2 Zn finger 134..154 CDD:275368 6/22 (27%)
zf-H2C2_2 147..171 CDD:290200 9/27 (33%)
C2H2 Zn finger 162..180 CDD:275368 7/19 (37%)
COG5048 <187..404 CDD:227381 73/350 (21%)
C2H2 Zn finger 191..211 CDD:275370 7/19 (37%)
C2H2 Zn finger 218..239 CDD:275368 7/20 (35%)
C2H2 Zn finger 248..268 CDD:275368 5/19 (26%)
zf-H2C2_2 260..285 CDD:290200 10/53 (19%)
C2H2 Zn finger 276..296 CDD:275368 6/19 (32%)
zf-H2C2_2 288..313 CDD:290200 10/24 (42%)
C2H2 Zn finger 304..324 CDD:275368 6/19 (32%)
C2H2 Zn finger 386..403 CDD:275368 5/16 (31%)
C2H2 Zn finger 424..441 CDD:275368 0/16 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.