DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10274 and hinf-1

DIOPT Version :9

Sequence 1:NP_001097525.1 Gene:CG10274 / 38716 FlyBaseID:FBgn0035690 Length:863 Species:Drosophila melanogaster
Sequence 2:NP_493579.2 Gene:hinf-1 / 173348 WormBaseID:WBGene00009553 Length:541 Species:Caenorhabditis elegans


Alignment Length:346 Identity:80/346 - (23%)
Similarity:128/346 - (36%) Gaps:104/346 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 EEEDEDGEKSKSRRKRIPPGERH------LHRIIDCHI----CHQKFKKAIRYEE---------- 286
            ||..::|....:.:.::....:|      |||.:..|:    |.||..:|:..:|          
 Worm   168 EEGVQNGNHMNTVQCKVRGCNKHLDSIFQLHRHVSMHVFQADCQQKGSEALIEKEDYIGIESCGF 232

  Fly   287 ----HMKHHNDLLPFQCKVETCRKGFTTAGGLRLHIDHAHTELSEVHSCNVDGCGKTFPRIRLLT 347
                ::.:...||  .|:.|.|...|.:...|..|:.|           ::||.|.. .||:   
 Worm   233 EPCTNINYEGMLL--NCQWEDCGMPFNSLTELFDHVGH-----------HIDGVGDV-DRIQ--- 280

  Fly   348 FHMKKMHGITKAAAPPRDYPCTEC----------------EKVFRCPMA---------LKKH--- 384
              ....:|..|...|.:...||:.                |||..||..         |..|   
 Worm   281 --QNFSNGDKKVVFPCKWTACTQVADSKANLRRHARHHSGEKVLACPFCARFFSRRDKLYDHCLR 343

  Fly   385 ---MYKHDGKELPFPCNICGKRFVINSALKDHLMRHAGIKNYVCPYCGVGKTTRQEWNTHILTHT 446
               :.|:...|.|:.|.:|.|||....||..|:.||  :.:..||.|.:|...|.|.:.|::|  
 Worm   344 RTILMKNPEMEDPYLCKLCQKRFGTEKALCMHVTRH--LVSLTCPLCSLGLGCRAELHRHLMT-- 404

  Fly   447 QEKKFKCHICEHASHNKQSLANHIKIVHEKIKNYACQYCGKTFGKSHACKIHEMTHTGEKRCECK 511
                         .|:::|            |::.|..|.|.|........|.:.|: :....||
 Worm   405 -------------KHSRRS------------KDFKCDTCSKLFFTESELNRHAVYHS-DVMYSCK 443

  Fly   512 VCGKKFLYPKSLTKHLKTHEK 532
            .|.:||.:.|.|.||:|.|::
 Worm   444 HCPEKFKWKKQLMKHMKEHDE 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10274NP_001097525.1 zf-AD 15..90 CDD:214871
C2H2 Zn finger 334..353 CDD:275368 5/18 (28%)
C2H2 Zn finger 368..388 CDD:275368 9/50 (18%)
COG5048 394..729 CDD:227381 39/139 (28%)
C2H2 Zn finger 397..417 CDD:275368 8/19 (42%)
C2H2 Zn finger 425..445 CDD:275368 7/19 (37%)
C2H2 Zn finger 453..474 CDD:275368 2/20 (10%)
C2H2 Zn finger 482..502 CDD:275368 5/19 (26%)
C2H2 Zn finger 510..530 CDD:275368 10/19 (53%)
C2H2 Zn finger 638..659 CDD:275368
C2H2 Zn finger 667..687 CDD:275368
zf-H2C2_2 680..704 CDD:290200
C2H2 Zn finger 695..715 CDD:275368
hinf-1NP_493579.2 C2H2 Zn finger 299..316 CDD:275368 2/16 (13%)
C2H2 Zn finger 324..344 CDD:275368 4/19 (21%)
C2H2 Zn finger 359..379 CDD:275368 8/19 (42%)
C2H2 Zn finger 385..406 CDD:275368 8/35 (23%)
C2H2 Zn finger 415..435 CDD:275368 5/19 (26%)
C2H2 Zn finger 442..462 CDD:275368 10/19 (53%)
C2H2 Zn finger 473..494 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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